Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq263 87.8 2e-12 >seq263 Length=70425 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 78496 GTCAGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACATCAACCGAACGC 78555 || || | |||||| ||||| ||||||||||| | || | |||||||| | || | Sbjct 35948 GTGAGCAAAGCGTAAGAGGCAATATTGAACGGTACGCCGAGAAAGACATCGGCTGATCTT 35889 Query 78556 TGATACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAGAAACAGTGACAC 78615 ||||| ||| ||| || || |||| || ||| | |||||||||| || || || Sbjct 35888 TGATAGAGCTGGCAAGAGAGCTTTCCGTCGAGCACGGCAAACTGGAAGAGGCAATGGCAA 35829 Query 78616 GGACGCAATGCCATTTTATCCAGATCAACAGGGTTCCATGCGGAAACGATGATCCCG-CG 78674 || |||||||||| | | ||| | ||||||||||| || ||||| || || || Sbjct 35828 GGCGGCAATGCCATATCGCTGACATCTGCCGGGTTCCATGCCGAGACGAT-ATGGCGACG 35770 Query 78675 ATCGTCTGGCGTGGTTTTCAGTTCGTTGACGATCCGAGCAATCTGGTCAA 78724 || || |||| ||||| || ||| | | | |||||||||||| Sbjct 35769 TGAGTTCGGATTGGTCTTCAGGGCGGTGAGCACCTCATCAATCTGGTCAA 35720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568465620051840