Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq708 84.2 2e-11 >seq708 Length=363590 Score = 84.2 bits (92), Expect = 2e-11 Identities = 192/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 118378 TCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGGAAAC 118437 || ||||||| ||| ||||| || | ||| | || | | |||| || || |||||| Sbjct 201015 TCCTCAAACTCAAAATCTTCAATGTCTTTCCTGTC-TCGA--ATGGTCAGCGTTGGAAAC 200959 Query 118438 GGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGACATGA 118497 | |||||| || | ||| || |||| |||||||||||| | || ||||| Sbjct 200958 GCTCGAGGCTGTCTCTCAATTTGCTCCTTGAGTGCCTCAATGTGATTGTTGTACACATGT 200899 Query 118498 GCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAATCATG 118557 | ||||| | ||| | || || || ||| | |||||||||| | || || | Sbjct 200898 GTGTCCCCCAACACATGGACAAAGTCTCCGGGTTTGAGCCCTGTCACCTTGGCGATTAGA 200839 Query 118558 TATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGCTGAT 118617 |||| | || || |||| ||| || || || || || |||||||| || Sbjct 200838 CATGTTAGCAGCGAATAAGATGCTATATTGAACGGTACCCCAAGTCCCATGTCGCAGGAG 200779 Query 118618 CTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 | ||||||| ||| || || ||||| |||||||| ||||| ||||| Sbjct 200778 CGTTGGTACATTTGACATGATAGCTCGCCGTTTGCGACATAGAACTG 200732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414471127237372