Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq374 89.7 6e-13 seq360 89.7 6e-13 seq347 89.7 6e-13 seq331 89.7 6e-13 seq265 89.7 6e-13 seq262 89.7 6e-13 seq239 89.7 6e-13 >seq374 Length=37716 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1049 GCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGCTA 1107 |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||| Sbjct 14371 GCAGGATTTGAACCTGCGACATCCTGCTCCCAAAGCAGGCGCGCTACCAAACTGCGCTA 14313 >seq360 Length=28839 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1049 GCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGCTA 1107 |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||| Sbjct 28013 GCAGGATTTGAACCTGCGACATCCTGCTCCCAAAGCAGGCGCGCTACCAAACTGCGCTA 27955 >seq347 Length=42671 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1049 GCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGCTA 1107 |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||| Sbjct 11240 GCAGGATTTGAACCTGCGACATCCTGCTCCCAAAGCAGGCGCGCTACCAAACTGCGCTA 11298 >seq331 Length=49663 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1049 GCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGCTA 1107 |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||| Sbjct 46613 GCAGGATTTGAACCTGCGACATCCTGCTCCCAAAGCAGGCGCGCTACCAAACTGCGCTA 46555 >seq265 Length=48727 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1049 GCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGCTA 1107 |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||| Sbjct 27436 GCAGGATTTGAACCTGCGACATCCTGCTCCCAAAGCAGGCGCGCTACCAAACTGCGCTA 27494 >seq262 Length=94814 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1049 GCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGCTA 1107 |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||| Sbjct 70296 GCAGGATTTGAACCTGCGACATCCTGCTCCCAAAGCAGGCGCGCTACCAAACTGCGCTA 70238 >seq239 Length=192504 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1049 GCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGCTA 1107 |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| |||| Sbjct 120164 GCAGGATTTGAACCTGCGACATCCTGCTCCCAAAGCAGGCGCGCTACCAAACTGCGCTA 120106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546328330808400