Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_031057.1 Length=180219 Score E Sequences producing significant alignments: (Bits) Value seq263 87.8 2e-12 >seq263 Length=70425 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 42256 TTGACCAGATTGCTCGGATCGTCAACGAACTGAAAACCACACCAGACGATCG-CGGGATC 42314 |||||||||||| | | | ||| || ||||| |||| || || || || || Sbjct 35720 TTGACCAGATTGATGAGGTGCTCACCGCCCTGAAGACCAATCCGAACTCACGTCGCCAT- 35778 Query 42315 ATCGTTTCCGCATGGAACCCTGTTGATCTGGATAAAATGGCATTGCGTCCGTGTCACTGT 42374 ||||| || ||||||||||| | ||| | | |||||||||| || || || || Sbjct 35779 ATCGTCTCGGCATGGAACCCGGCAGATGTCAGCGATATGGCATTGCCGCCTTGCCATTGC 35838 Query 42375 TTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCGGTT 42434 |||||||||| | ||| || |||| || || ||| ||| ||||| | || | Sbjct 35839 CTCTTCCAGTTTGCCGTGCTCGACGGAAAGCTCTCTTGCCAGCTCTATCAAAGATCAGCC 35898 Query 42435 GATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCTGAC 42484 |||||||| | || | ||||||||||| ||||| |||||| | || || Sbjct 35899 GATGTCTTTCTCGGCGTACCGTTCAATATTGCCTCTTACGCTTTGCTCAC 35948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576564706359320