Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq263 116 6e-21 >seq263 Length=70425 Score = 116 bits (128), Expect = 6e-21 Identities = 176/248 (71%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 201847 CGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAA-CTTAC 201905 |||||| || || || || || | || || || || |||||||||||| | ||| | Sbjct 35451 CGACCGCACGGGCACAGGAACAAAGGCCGTGTTTGGTCGGCAGATGCGCTTTGATCTTGC 35510 Query 201906 AAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGC 201965 || || ||| |||||| | || |||||||| | ||||| || || | || | Sbjct 35511 GAGCAG-TTTCCCGCTGCTGACGACCAAAAAACTGCACCTGAAAAGCATTATTTACGAAC 35569 Query 201966 TGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCA 202025 |||| ||||| | | ||| ||||| || || ||| ||||||| ||| ||| | | Sbjct 35570 TGCTCTGGTTTTTGAAGGGCGACACGAATATTGCCTATCTGAAAGAAAACGGCGTTTCGA 35629 Query 202026 TCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGC 202085 ||||||| || ||||| ||| |||| || || | |||||||| || || |||||||||| Sbjct 35630 TCTGGGATGAGTGGGCTGATGAAAATGGCGATCTTGGCCCGGTCTATGGCAAGCAATGGC 35689 Query 202086 GTAGCTGG 202093 | |||||| Sbjct 35690 GCAGCTGG 35697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787992138405080