Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq237 140 2e-28 >seq237 Length=100024 Score = 140 bits (154), Expect = 2e-28 Identities = 190/260 (73%), Gaps = 9/260 (3%) Strand=Plus/Minus Query 96742 CACCGTGCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCAT 96801 ||| ||||| | ||||||||||| |||||||| | || | || | || ||| || Sbjct 80491 CACGGTGCCTACCGGGCCATTTCGCTGCTTTCCAACGATGATTTCCGTAACGCCTTTTTC 80432 Query 96802 TTCGCTATCCGG---GTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTC 96858 | || ||||||| || |||| ||||||||||| | ||||||||||||||| ||||| Sbjct 80431 TGCG-TATCCGGACTGTAATAA---TCGTCGCGATAGACAAACATGATCAGGTCGGCGTC 80376 Query 96859 CTGCTCAATTGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTG 96918 ||||||||| || ||||| || |||||||| | |||||||| || || || Sbjct 80375 CTGCTCAATCGCCCCTGACTCCCGTAAATCGCTCAGCAGAGGTCGTTTATCTTGCCGTTG 80316 Query 96919 TTC-AAGCGATCGATTAAGTTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCA 96977 || ||| || ||||| || || || | |||||||| || || | | |||||||||| Sbjct 80315 CTCGAAGTGAACGATTGAGCTGAGATAGCGCCACCACGGGCACATTGAGCTCCTTCGCCA 80256 Query 96978 ACGCCTTCAG-TGAGCGAGA 96996 | |||||||| | |||||| Sbjct 80255 AAGCCTTCAGCCGCGCGAGA 80236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330894671127418