Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq263 96.9 1e-15 >seq263 Length=70425 Score = 96.9 bits (106), Expect = 1e-15 Identities = 234/352 (66%), Gaps = 2/352 (1%) Strand=Plus/Plus Query 51913 ACGGCGTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATG 51972 ||||||| || ||||| || ||||| ||||||||||| | || || || || |||| Sbjct 35618 ACGGCGTTTCGATCTGGGATGAGTGGGCTGATGAAAATGGCGATCTTGGCCCGGTCTATG 35677 Query 51973 GTAAGCAGTGGCGTAGTTGGGATGCTGGTGGCGGCAAGGTCATCGATCAGATCCATGAAG 52032 | ||||| ||||| || |||| | | ||| || || || ||||| |||| | Sbjct 35678 GCAAGCAATGGCGCAGCTGGGCGACACCAGACGGACGTGTTATTGACCAGATTGATGAGG 35737 Query 52033 TCGTCAAATCAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATG 52092 | ||| | | |||| | |||| | || || || || ||||| || ||||| Sbjct 35738 TGCTCACCGCCCTGAAGACCAATCCGAACTCACGTCGCCATATCGTCTCGGCATGGAACC 35797 Query 52093 TGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAG 52152 || ||| | |||||||| ||| | || |||||| || ||||| || || | Sbjct 35798 CGGCAGATGTCAGCGATATGGCATTGCCGCCTTGCCATTGCCTCTTCCAGTTTGCCGT-G 35856 Query 52153 CT-GAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTT 52211 || || || ||||| || ||||| | ||||| | || ||||| | || | ||||| Sbjct 35857 CTCGACGGAAAGCTCTCTTGCCAGCTCTATCAAAGATCAGCCGATGTCTTTCTCGGCGTA 35916 Query 52212 CCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAG 52263 ||||| || |||||| || | ||||| || | |||| || || |||| Sbjct 35917 CCGTTCAATATTGCCTCTTACGCTTTGCTCACACTCATGATGGCACGCGCAG 35968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190093464951030