Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq15 118 9e-22 seq528 111 1e-19 >seq15 Length=259596 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| ||||| || |||||||| || ||||| | || || ||| || Sbjct 136029 CACCAAGTGGAGTGTAGCTTCCTTTTGAATATTATAATCTTGAAGTGTACGACCATCTTC 136088 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||| |||||||||||| |||| || | || ||||| ||||| || || ||||| || Sbjct 136089 GAGTTGTTTTCCAGCGAAGATAAGTCTTTGTTGATCTGGAGGAATTCCTTCCTTATCCTG 136148 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||||||| || || ||||| ||| || | | |||||||| | ||| | || || Sbjct 136149 AATTTTTTGCTTCACAGATTCGATGGTATCTGCATTTTCGACCTCAAGGGTGATGGTCTT 136208 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 || |||| || || ||||| || ||||| || Sbjct 136209 TCCAGTCAATGTCTTCACAAAGATTTGCATTGC 136241 >seq528 Length=44320 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| ||||| || |||||||| || ||||| | ||||| ||| ||| Sbjct 9248 ACCAAGTGGAGTGTAGCTTCCTTTTGAATATTATAATCTTGAAGTGTGCGACCATCTTCG 9307 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || |||||||||||| |||| || | || ||||| ||||| || || ||||| || | Sbjct 9308 AGTTGTTTTCCAGCGAAGATAAGTCTTTGTTGATCTGGAGGAATTCCTTCCTTATCCTGA 9367 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||||| || || ||| | ||||| | | |||||||| | ||| | || || Sbjct 9368 ATCTTTTGCTTCACAGATTCAATAGTGTCTGCATTTTCGACCTCAAGGGTGATGGTCTTT 9427 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| || || ||||| || ||||| Sbjct 9428 CCAGTCAATGTCTTCACAAAGATTTGCAT 9456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433819323089740