Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq72 98.7 1e-15 >seq72 Length=150145 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/185 (72%), Gaps = 8/185 (4%) Strand=Plus/Minus Query 80993 ATAGGTATCGATGAAGGACAGTTCTTTCCAGACATTGTTGAATTCTGTGAGCGTATGGCA 81052 ||||| || ||||||||||| || | |||||| | || ||||| ||||| | ||| Sbjct 53678 ATAGGAATAGATGAAGGACAATTTTATCCAGATTTAGTGGAATTTTGTGA----AATGCA 53623 Query 81053 AACGAA----GGAAAAATAGTTATAGTAGCCGCGCTCGATGGGACATTTCAACGTAGACC 81108 | |||| |||||||| || || || || || || ||||| ||||||||| | | || Sbjct 53622 AGCGAATTCTGGAAAAATTGTAATTGTTGCAGCTCTTGATGGAACATTTCAAAGAAAACG 53563 Query 81109 GTTTAATAATATTTTGAATCTTATTCCATTATCTGAAATGGTGGTAAAACTAACTGCAGT 81168 |||||| || || | |||| ||||| |||| ||| || | |||||| | ||| || Sbjct 53562 ATTTAATGATGTTGTTGATCTAATTCCGTTATGCGAATCAGTTGAAAAACTCAATGCGGT 53503 Query 81169 GTGTA 81173 |||| Sbjct 53502 CTGTA 53498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629801106651600