Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq216 89.7 4e-13 >seq216 Length=89640 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | ||| || | ||| | ||| ||||| ||||||||| || ||||| || | Sbjct 83042 CCTCCTCTCAATCTCAGCACAAGATGGAGTGTTGCCTCCTTTTGGATATTGTAGTCTTGC 83101 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 ||| || |||| |||| ||||| || || | || | | ||| || ||| || Sbjct 83102 AATGTGCGACCGTCTTCCAATTGCTTTCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGA 83161 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || ||||||||| ||| |||||||| | ||| | || || || | || | Sbjct 83162 ATACCTTCCTTGTCTTGAATCTTCTGCTTAACTGACTCAATTGTGTCAGCGTTTTCAACC 83221 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || |||||||| || || | |||||||||||| |||||||| Sbjct 83222 TCAAGGGTGATGGTTTTTCCAGTCAAAGTTTTCACAAAGATCTGCAT 83268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421240444272095