Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq126 82.4 8e-11 >seq126 Length=114318 Score = 82.4 bits (90), Expect = 8e-11 Identities = 197/298 (66%), Gaps = 0/298 (0%) Strand=Plus/Minus Query 65583 AGATGTTATTGGTATAGATGAGGGACAGTTTTTTCCAGATATTGTTAATTTTTCGGAATC 65642 |||||| ||||| | ||||| ||||| |||| ||| ||| | | | |||| ||| | Sbjct 63367 AGATGTAATTGGAGTTGATGAAGGACAATTTTATCCTGATTTATTGGAATTTTGTGAAGC 63308 Query 65643 TATGGCAAATATTGGTAAAATTGTTATTATCGCCGCCTTAGACGGTACTTATAAAAGAAG 65702 | |||||| ||| |||||||||||| | |||| | ||||| |||| |||| | Sbjct 63307 TCAAGCAAATGATGGAAAAATTGTTATTGTATCCGCTCTTGACGGAACTTTCCAAAGGAA 63248 Query 65703 TCCGTTTAATGATATTTTACAACTTATACCATTATCAGAGAAAGTTATAAAACTAAATGC 65762 |||||||| || | | || || ||| | | || ||| | || ||| | | Sbjct 63247 GAGATTTAATGACGTTGTTGACCTCATTCCAATGTGCGAATCGGTTGTGAAGTTAACTTC 63188 Query 65763 GGTATGTATGAATTGTTATGGAGACGCATCTTTTTCAAAAAGAATTAGTGACGAAAAAGA 65822 || || |||| |||| |||| ||| | ||||| ||||||||| || || ||| Sbjct 63187 TGTGTGCATGATTTGTGGTGGAACAGCAGCCTTTTCCAAAAGAATTGTTGCAGACAAATC 63128 Query 65823 AATAGAGATTATAGGAGGAAGTGAAAAATATAAATCCGTATGTAGAAAATGTTATTTT 65880 | ||| || | || ||| |||| || | | || || ||||| || |||||| Sbjct 63127 TGTGGAGCTTGTCGGTGGAGCTGAAGCTTACACGGCTGTTTGCAGAAAGTGCTATTTT 63070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531886870847800