Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq216 120 3e-22 >seq216 Length=89640 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 ||| |||||||||||||| || || | || |||||||| |||||| ||||| || Sbjct 83500 AAACATGCAAATTTTTGTGAAGACATTGACAGGAAAAACAATTACCCTCGAAGTCGAAAA 83441 Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | ||||| ||| | || || ||||||||| ||||| ||||| |||| || Sbjct 83440 CGCAGACACAATTGAATCTGTGAAGCAAAAAATTCAAGATAAGGAAGGAATCCCTCCGGA 83381 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||||||||||||||||| || || |||||| | ||||||| | ||| | || || Sbjct 83380 TCAGCAAAGACTTATTTTCGCAGGAAAACAACTCGAAGATGGTAGAACTCTCCAGGACTA 83321 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| |||||||| | || | ||| | ||||||||| | || || || Sbjct 83320 CAACATCCAAAAAGAAGCCACATTGCATCTTGTGTTGAGACTTCGTGGTGG 83270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425333139771400