Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq216 114 1e-20 >seq216 Length=89640 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || ||||| || ||||| || || || ||| ||||| | ||| || |||||| || Sbjct 83078 TCCTTTTGGATATTGTAGTCTTGCAATGTGCGACCGTCTTCCAATTGCTTTCCAGCGAAG 83137 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG- 114310 || || | |||||||||||||||||| ||||| ||||| |||||| || ||| ||| Sbjct 83138 ATAAGTCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCTTGAATCTTCTG-CTTAACTGA 83196 Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 |||| ||||| | | ||| || || | ||| | ||||| || |||| |||||| || Sbjct 83197 CTCAATTGTGTCAGCGTTTTCAACCTCAAGGGTGATGGTTTTTCCAGTCAAAGTTTTCAC 83256 Query 114371 AAAAATCTGCAT 114382 ||| |||||||| Sbjct 83257 AAAGATCTGCAT 83268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420123672787140