Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq58 116 5e-21 >seq58 Length=166100 Score = 116 bits (128), Expect = 5e-21 Identities = 378/573 (66%), Gaps = 18/573 (3%) Strand=Plus/Minus Query 176509 GAAGTATTCCCGAGCTTCGGCACTCGTGCTCGTACCGAGACCCTTATAGTATTTGATTTT 176568 |||||| || ||||| ||| ||| ||||| |||||||||||||| ||||| || Sbjct 91663 GAAGTACTCTTTCGCTTCAGCAGGTGTGGAGGTACCCAGACCCTTATAGTACTTGATCTT 91604 Query 176569 CCATCCA-GGTTGTCCGTTTCCATACCAAGAT--CT-AAATGTAGAATCTGTATAGAATG 176624 |||||| || || ||||| | | || || || ||| | || || || || |||| Sbjct 91603 CCATCCGCGGGTG-CCGTTCCTCTGCCTCCATTCCTCAAACGATGATTCAGTGTAAAATG 91545 Query 176625 ACTTGGATTGAGAACCTTTGGATGCCTTGATAATTGGTGTCACCATGGACACAA-CA-AA 176682 |||| | ||||| | ||| ||||| |||||||| | || || | || || Sbjct 91544 ACTTCACTGTTTTTCCTTTCGTTGCTTTGATGATTGGTGTGA---TGAACTCCTGCATAA 91488 Query 176683 ACCCA----ACTTGAGAAGACTTGGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCT 176738 | || | || | |||| |||||| | | | | ||| |||| | || |||| Sbjct 91487 AGCCGTTGTATTTCAAAAGAGATGGCCACATCTTTTCGAACATGTTGATGAGAAGTCCCT 91428 Query 176739 TGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCGAAGCT 176798 ||||||| || || || | ||| ||| | ||| ||||| ||| | ||||| | || | Sbjct 91427 TGATGTGAGACCCATCATGATCCTGATCAGCCATAATCATCAGATGCCCATATCTCAGAT 91368 Query 176799 CGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGA 176858 | || ||| | ||| | || || || ||||| |||| ||| ||||| | || | | Sbjct 91367 CCTTAATATCATCATAATGTTTGCCTTGCTGAAGCCCCATGATTTTCTTTATATTTGTAA 91308 Query 176859 ACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACAC-TTCCCA 176917 | || ||| | ||||||| | | ||||| | ||||| | ||| || || Sbjct 91307 ATTCAGCATTTTGCGACAGCTGTGATGCTGTTGCATCTCTCACATTGAT-CACTTTACCT 91249 Query 176918 CGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGC 176977 | || || || || || || | || | ||||| ||| || || ||||| || ||| Sbjct 91248 CTCAGTGGAAACACTCCATAATTGTCTCTACCAATCACTCCAAGCCCTGCAACAGCAAGC 91189 Query 176978 GTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGC-CAGATTGTGCCGTACC 177036 | ||| |||||||| || || |||| || ||||| || || | | ||| | ||||| Sbjct 91188 GATTTGGCAGAATCTCCTTCGGTCAGAATAAGTGTGCAGTTACGCGCATTACG-AGTACC 91130 Query 177037 CGCCTTGTTCGCATCATCCAATTTGGGAATACC 177069 ||| |||| ||||| || || || ||||| || Sbjct 91129 AGCCATGTTGGCATCTTCTAACTTTGGAATTCC 91097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620726144308400