Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq72 123 3e-23 >seq72 Length=150145 Score = 123 bits (136), Expect = 3e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 65855 TAATAGGAATAGATGAAGGCCAATTCTTTCAAGATATTGTAGAGTTTTGTGAAAATATGG 65914 ||||||||||||||||||| ||||| | || |||| | || || |||||||||| | Sbjct 53680 TAATAGGAATAGATGAAGGACAATTTTATCCAGATTTAGTGGAATTTTGTGAAATGCAAG 53621 Query 65915 CAAATAAAGGAAAAATAGTGATAGTTGCAGCATTGGATGGAACATTTAAAAGAAAACCTT 65974 | ||| |||||||| || || |||||||| | |||||||||||| ||||||||| | Sbjct 53620 CGAATTCTGGAAAAATTGTAATTGTTGCAGCTCTTGATGGAACATTTCAAAGAAAACGAT 53561 Query 65975 TTGGTAATGTATTAAATTTAATTCCATTATCTGAAACAGTAACAAAACTTACAGCTGTGT 66034 || | |||| | || ||||||| |||| ||| |||| |||||| | || || | Sbjct 53560 TTAATGATGTTGTTGATCTAATTCCGTTATGCGAATCAGTTGAAAAACTCAATGCGGTCT 53501 Query 66035 GTA 66037 ||| Sbjct 53500 GTA 53498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562094079775800