Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq41 260 1e-63 seq116 215 4e-50 seq263 205 7e-47 seq1081 190 2e-42 seq647 178 1e-38 seq11 174 1e-37 seq216 147 2e-29 seq15 113 4e-19 seq528 109 4e-18 seq858 98.7 8e-15 seq424 98.7 8e-15 seq373 86.0 5e-11 >seq41 Length=188974 Score = 260 bits (288), Expect = 1e-63 Identities = 413/589 (70%), Gaps = 5/589 (1%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||||||||||| ||| | |||||| | || || ||||| || || Sbjct 104085 GGAATTGATTTAGGAACAACAAAATCTTGTGTGGCAGTCATGCGCGATGGTGTTGTCGAT 104026 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 |||||||| ||||||||||| ||||||| ||| || || ||||| ||||||| || || Sbjct 104025 ATTATTGCAAATGATCAAGGAAACAGAATTACACCTTCGTATGTGGCTTTCACTGACTCT 103966 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 ||| || | || || || |||||| |||| || ||||| ||||||||| || Sbjct 103965 GAAAGATTGTTGGGAGACGCTGCAAAAAGCCAAGTTGCTATGAATCCCACCAATACTGTT 103906 Query 550178 TTTGATGCTAAACGTTTAATTGG-AAGAAGTTTTAATGATTCGACTGTTCAGGCAGATAT 550236 |||||||| || ||| | ||||| || ||||||| | ||| ||||| ||||| Sbjct 103905 TTTGATGCAAAGCGTATGATTGGGAAAAAGTTTTCA-GATCAAGAAGTTCAATTTGATAT 103847 Query 550237 GAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGA---AAACCTTATATTGAAGCTAC 550293 ||| | |||||| ||| || ||||| | ||| || || | |||||||| ||| Sbjct 103846 GAAACTTTGGCCATTCAAAGTTGTTCAAAAGGAAGGAGATAAGCCATTTATTGAAGTTAC 103787 Query 550294 TCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAA 550353 || ||||| ||| || ||||| || |||||||| || |||||| | | || Sbjct 103786 GTATAAAGGAGAAGTTGTTCAGTTTTCTCCCGAACAAATCAGCTCAATGGTTCTGACAAA 103727 Query 550354 AATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGT 550413 |||||| ||||||||| || ||| |||| | || || | | ||||| || || || Sbjct 103726 AATGAAGCAAACAGCCGAAGCATTTCTTGGAGAGAAAATTGAGCAAGCAGTTATTACGGT 103667 Query 550414 ACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473 ||||| ||||||||||| ||||||| || || || || || ||| ||||| Sbjct 103666 GCCAGCTTATTTTAATGATGGACAACGTTCTGCAACAAAGGACGCAGGAACCATTGCAAA 103607 Query 550474 ACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGA 550533 || ||||| || | ||||| ||||| || |||||||| ||| | ||||| ||| | || Sbjct 103606 CCTCGATGTTATTAGAATTATTAATGAGCCAACTGCTGCAGCAATCGCATACGGATTGGA 103547 Query 550534 TAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 || || |||||| |||||| || |||| || || |||| ||| ||| Sbjct 103546 CAAGCAAAATGATAAAGAACAAAAAATACTTATTTTCGATTATGGTGGT 103498 >seq116 Length=120655 Score = 215 bits (238), Expect = 4e-50 Identities = 378/546 (69%), Gaps = 6/546 (1%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| ||||| |||||||| || || || ||||| |||||||| | |||||||| | ||| Sbjct 532 TATTGGTATCGATTTAGGGACAACGTACAGTTGCGTTGGTGTATATCAAAATGGAAGAGT 591 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 |||||||||||| ||||| |||| | | || ||||| || | ||| |||| |||| Sbjct 592 TGAAATTATTGCTAATGAATTAGGTCATCGCACAACTCCTTCATGGGTTGCTTTTTCGGA 651 Query 550114 AACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172 | || | ||| ||||||||||||| |||| ||||| | ||||| || || | Sbjct 652 TATGGATAGGCTTA-TTGGTGATGCAGCCAAATCTCAAGTGTCAATCAATCCAACAAACA 710 Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAG 550232 |||||| ||| ||| | | |||||||||| | ||||| | |||||| || Sbjct 711 CTATTTATGACATGAAAAGACTTATTGGAAGAAAATGGGATGATCCAGAAGTTCAGAGAG 770 Query 550233 ATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA 550292 || ||| | || ||| | |||||||| ||||| ||| |||||| || Sbjct 771 ATGCAAAGTTATATCCATTCAAGCTTGTTAATTCCGACGGAAAGCCTATCGTTGAAGTTA 830 Query 550293 C--TCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAAT 550350 | ||| ||||| | | |||| | || ||| ||||||| | ||||| | Sbjct 831 CAGTCA--AAGGAGAGCAGAGAAGATTTGCTCCCGAAGAAATTTCTGCCATGGTGCTCGG 888 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 |||||||| |||| || | | || | | || |||||||||| |||| || || || Sbjct 889 AAAAATGAAGCAAATTGCAAAAGATTATTTAGGCAAAGAAGTTACACATGCTGTGATTAC 948 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 ||| ||||| ||||| || || | |||||||||||||| |||||||| ||| ||||| Sbjct 949 TGTGCCAGCCTATTTCAACGATGCTCAACGTCAAGCTACAAAAGATGCAGGAACAATTGC 1008 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 |||| | | |||| | | | || ||||| || || || || ||||||||||| | Sbjct 1009 TGGATTGACTGTTGAAAGAGTCCTTAACGAACCAACGGCAGCCGCTGTTGCATATGGAAT 1068 Query 550531 TGATAA 550536 |||||| Sbjct 1069 TGATAA 1074 Score = 183 bits (202), Expect = 2e-40 Identities = 389/569 (68%), Gaps = 15/569 (3%) Strand=Plus/Plus Query 552040 CTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTG 552099 ||||| | || ||| |||| | ||||||| ||||||||||| | |||| || |||| Sbjct 1434 CTGATTTATTCAGATCAACACTCAAACCAGTTGAACAAGTTTTGAAAGATGCAG-GATTA 1492 Query 552100 AT-AAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATT 552158 | ||||| | | | ||| ||||| | |||||||||||| || | ||||| |||||| Sbjct 1493 AAGAAATCTGAGATCGACGAAGTTGTGATGGTTGGTGGATCTTCACGTATTCCAAAAATT 1552 Query 552159 CGCGAAAT-GTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTG---TTAATCC 552214 | || | ||||| ||| |||| || ||| || | || ||| | | ||||| Sbjct 1553 CAACAATTAGTTAAAGACTT-TTTCGGAGGCAAAGAACT---TGCAAGAGGAATCAATCC 1608 Query 552215 AGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACT-G 552273 ||||| || ||||| ||||| || ||||| ||||| | ||| ||| || | | | Sbjct 1609 GGATGAAGCAGTTGCGTATGGAGCTGCAATGCAAGCGTC-ATTGTTTTCCGATGATTTAG 1667 Query 552274 ATGAAAA-ACTACAAAAT--ATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAG 552330 ||| | | || | ||| || || | | ||| ||||| | | || || | | Sbjct 1668 ATGCTGAGAATAAAGAATCAATGGTGATCATTGATAGAACTCCATTGACACTCGGAATCG 1727 Query 552331 AAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAA 552390 ||||||||||||| |||||||| ||| ||||| ||||||| | ||||| || |||| Sbjct 1728 AAACAGTTGGAGGAGTTATGACTCCACTTGTCGATCGAAATACAATCATTCCGTGCAAAA 1787 Query 552391 AATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTG 552450 | |||||||| || ||| | ||||||||| |||| ||| || ||| || Sbjct 1788 AGAGCAAAGTATTTTCAACCTATGCCGATAATCAAGAATCTGTGCTGATTAAAGTTTATG 1847 Query 552451 AAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTA 552510 |||||||| ||||| | |||||||| | | | ||| ||||| | | ||| | Sbjct 1848 AAGGAGAACGAAAAATGGTAAAAGATAACCACGAGTTAGGTCAATTTAACCTTGGAGGAA 1907 Query 552511 TTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATG 552570 |||| || || | ||||| || |||||||| |||||||| || |||||| | || | Sbjct 1908 TTCCACCCGCAAAGAGAGGAGTCCCTCAAATTGAGGTTACTTTTGAAATCGATTCAAACG 1967 Query 552571 GAATTTTGAATGTGACTGCTTGTGATAAA 552599 | ||| || ||| |||||| |||| || Sbjct 1968 GTATTATGTCTGTTACTGCTCTTGATCAA 1996 Score = 100 bits (110), Expect = 2e-15 Identities = 204/300 (68%), Gaps = 11/300 (4%) Strand=Plus/Minus Query 361546 ATCTATATCTTCACCACCTAAATGTGTACTACCGCTAACTGCTA-ATGTTCTAAATAAGC 361604 ||| | |||||| || |||||||| ||| | ||| | || | | ||| ||| || Sbjct 1216 ATCAAAATCTTCTCCTCCTAAATGAGTATTTCCGTTTGTTGAAAGAACTTC-AAAGAACT 1158 Query 361605 CATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATAA 361664 | || | ||| | | ||| ||||||||| || ||| |||| | ||| || | |||| Sbjct 1157 CTTTTTCAATTTGAAGAAGAGAAACATCGAAAGTCCCTCCACCAAGATCGTAAACAATAA 1098 Query 361665 TATTCCCCCCGTTTTTATTTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCAG 361724 | ||| ||||||||| ||| ||| ||| ||||| || | | || | Sbjct 1097 TGTTCTTTTCGTTTTTATACTTC------TTAT---CAATTCCATATGCAACAGCGGCTG 1047 Query 361725 CTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAG 361784 | ||||||||||||| | | | |||| | | ||| || ||| || ||||||| | Sbjct 1046 CCGTTGGTTCGTTAAGGACTCTTTCAACAGTCAATCCAGCAATTGTTCCTGCATCTTTTG 987 Query 361785 TGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTTCAACTT 361844 | ||||||||||| ||||| || ||||| || || ||||||||||| || | | ||||| Sbjct 986 TAGCTTGACGTTGAGCATCGTTGAAATAGGCTGGCACAGTAATCACAGCATGTGTAACTT 927 >seq263 Length=75970 Score = 205 bits (226), Expect = 7e-47 Identities = 377/549 (69%), Gaps = 14/549 (3%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| ||| | ||||| || || |||||||| ||||| | ||||||||| ||| Sbjct 72121 ATTGGTATTGATCTTGGAACAACTTACAGTTGTGTCGGTGTATATCAAAATGGTCGTGTT 72180 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 |||||||||||||| || ||| | ||||| ||||| || | ||| | ||||||||| Sbjct 72181 GAAATTATTGCCAACGAATTGGGTCATAGAACAACTCCTTCATGGGTTGCATTCACGGAA 72240 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 ||||| | ||| |||||||||| || |||| ||||| || || || || ||||| Sbjct 72241 ACTGATCGATTAATTGGTGATGCGGCCAAATCTCAAGTGTCTCTCAACCCAACTAATACG 72300 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | | |||| ||| | |||||||| |||| | | ||| || ||| | ||| Sbjct 72301 TTATATGATATGAAAAGACTAATTGGACGAAGATGGGACGATCCGGAAGTTAAACGTGAT 72360 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACT 550294 |||| | || || || |||| ||| |||||||| |||||| | Sbjct 72361 GCTAAGCTCTACCCATTTAAACTTGTGAATAAGGAAGGAAAACCAATGGTTGAAG----T 72416 Query 550295 CATG------AAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTA 550348 |||| ||||| | ||| ||||||||| ||| ||||||| | ||||||||| Sbjct 72417 CATGGTTAAAAAGGAATCG--AAAATATTTTCACCTGAAGAAATTTCTGCCATGGTTTTA 72474 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAAT 550407 | ||| |||||| || || | || | ||| ||| | ||||| |||| || | Sbjct 72475 ACGAAGATGAAAACAATTGCTCAAGATTAT-TTGTCCAAAACTGTTACTCATGCTGTTGT 72533 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 ||| || || ||||| ||||| ||||||||||||| || || ||||| || || Sbjct 72534 CACTTGCCCTGCTTATTTCAATGATGCACAACGTCAAGCAACAAAGGATGCAGGTACCAT 72593 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||||||| | || || | ||| || | ||||| ||||| ||||| || ||||||| || Sbjct 72594 TGCTGGAATGAACGTGATGCGTGTTTTGAATGAGCCTACAGCTGCAGCTATTGCATACGG 72653 Query 550528 ACTTGATAA 550536 | ||||| Sbjct 72654 TATGGATAA 72662 >seq1081 Length=18639 Score = 190 bits (210), Expect = 2e-42 Identities = 401/594 (68%), Gaps = 8/594 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| | || || ||| | ||||| |||||| || |||||||| ||| | |||| | | Sbjct 5245 GCTGTTGGAATTGATCTTGGAACAACATATTCGTGCGTTGGTGTATGGAAGAATGAAACA 5186 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| || | ||||||||||| || ||||| ||||| || | ||| ||||||| Sbjct 5185 GTAGAAATCATCCCTAATGATCAAGGAAATAGAACGACTCCGTCCTGGGTTGCTTTCACT 5126 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 ||| |||| || | || ||||| ||||| |||||| | | ||||| ||| Sbjct 5125 CCAACCGAACGATTGATCGGCGATGCTGCAAAGAATCAAGGAAATATGAATCCAGAAAAT 5066 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTG---TTCAG 550228 | | ||||| ||| | | |||||| | |||||| |||| | || |||| Sbjct 5065 TCGCTCTTTGACAGCAAAAGAATGATTGGACGCCGTTTTAGTGAT---AATGAAATTCAA 5009 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACC-TTATATTGA 550287 ||||||||||||||||| ||| || ||||| || ||| ||||| || | || | | Sbjct 5008 AATGATATGAAGCATTGGCCATTCAAAGTTGTTGATCGTTCGGGAAAGCCAATGTA-TCA 4950 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 || | | |||| ||| ||||||||||||| |||| || ||||| | Sbjct 4949 AGTCAAATACAAAGGTGAAACAAAAGAATTTTCACCAGAGGAAATCAGCTCAATGGTCCT 4890 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 |||||||||| | | || | || | |||| || |||| || || || || | Sbjct 4889 GTCGAAAATGAAAGACATCTCCGAAGTTTATCTTGGACACAAAGTCACAGAAGCTGTTGT 4830 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 ||| |||||||| || || || ||||| || || || || ||||||||| || Sbjct 4829 GACTTGCCCAGCATACTTCAACGATAGCCAACGCCAGGCCACAAAGGATGCTGGAACAAT 4770 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||| || || || || || | || |||||||| || || || ||||| |||| ||||| Sbjct 4769 TGCAGGGCTGAACGTCCTCAGAATCATCAATGAGCCAACAGCATCTGCAATTGCCTATGG 4710 Query 550528 ACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 | |||||| | || || ||| | || || ||||| || |||| ||||| Sbjct 4709 TTTGGATAAAAAGAAAGAGTCGGAAATGAACGTTCTCATTTTCGATTACGGAGG 4656 >seq647 Length=36484 Score = 178 bits (196), Expect = 1e-38 Identities = 406/605 (67%), Gaps = 26/605 (4%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | || || ||| | ||||| |||||| || |||||||| ||| ||| | | Sbjct 31625 AGCTGTCGGAATTGATCTTGGAACAACATATTCGTGCGTTGGTGTATGGAGAAACGAAAC 31566 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||| || || | |||||||||||||| ||||| |||||||| | ||| |||| || Sbjct 31565 TGTTGAGATCATCCCAAATGATCAAGGTAATAGAACAACTCCATCATGGGTTGCTTTTAC 31506 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| || | ||| |||||||||| ||||| |||||| | || || || Sbjct 31505 TCCAACGGAGCGTTTGATTGGTGATGCTGCAAAGAATCAAGGAAACATGAACCCGGAAAA 31446 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTG---TTCA 550227 || | ||||| ||| | | || ||| | |||||| |||| | || |||| Sbjct 31445 CTCTCTCTTTGACAGCAAAAGAATGATCGGACGTCGTTTTACTGAT---AGTGAAATTCA 31389 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCAAATT---GTTAATGTTTCTGGAAAACCT-TATA 550283 | ||||| || |||||||| ||| || || | || | ||||| || | || Sbjct 31388 GAACGATATCAAACATTGGCCATTCAAAGTTACAGAGAAAGAC---GGAAAGCCAATGTA 31332 Query 550284 T----TGAAGCTACTCA--TGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCAT 550337 | | ||| ||| | |||| | ||| |||||||||||||| ||||| | Sbjct 31331 TCAGGTCAAG-TACAAAGGTGAAACA------AAAGAATTTTCACCAGAAGAAATTAGCT 31279 Query 550338 CTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGG 550397 | ||||| || || ||||| ||| | |||| | |||| || |||| || | Sbjct 31278 CCATGGTGTTGTCAAAGATGAAGGAAATTTCTGAAGCTTATCTTGGACACAAAGTCACAG 31219 Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 | || || | ||| ||||| ||||| || || |||||||| || || || |||| Sbjct 31218 AAGCTGTTGTGACTTGCCCAGCTTATTTCAACGATAGCCAACGTCAGGCCACCAAGGATG 31159 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| ||||||||| | ||||| || | || ||||| ||||| || || ||||| Sbjct 31158 CTGGAACAATTGCTGGAATGAATGTACTCAGAATCATCAACGAACCAACAGCATCTGCAA 31099 Query 550518 TTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTG 550577 |||||||||| ||||| || | || || ||| | ||||| ||||| || |||| | Sbjct 31098 TTGCATATGGTCTTGACAAGAAGAAAGACACTGAATTGAATGTTCTCATTTTCGATTACG 31039 Query 550578 GAGGT 550582 ||||| Sbjct 31038 GAGGT 31034 Score = 159 bits (176), Expect = 3e-33 Identities = 467/708 (66%), Gaps = 16/708 (2%) Strand=Plus/Minus Query 551899 TTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAA 551958 || ||||| | ||||||||||||||| | || || |||| |||||| || || ||| Sbjct 30861 TTGGTCGTTTGAGAACTGCTTGCGAACGTGCAAAGAGAGCACTTTCAACTTCAACACAAG 30802 Query 551959 CCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCT--ATTTCGAG 552016 | || |||||| | ||||| | ||||| ||| |||||| || |||| ||| | | Sbjct 30801 CAACAATTGAAATCGATTCTCTCTTTGAAGGACTTGATTTCAA--CGCCGTGATTACTCG 30744 Query 552017 GGCCAAATTTGAAGATATTTGTTCTGATCTC--TTTAGAAAAACAATTGAACCAGTAGAA 552074 || ||||| ||| | |||| | ||| | || ||||| | |||||| | || Sbjct 30743 TGCAAAATTCGAACAA--TTGTGCGAATCACAATTCAGAAAGTGCTTGGAACCATTGGAT 30686 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 | | | | |||||||| | || ||||||||| | ||||||| || | ||||| Sbjct 30685 CGTGCTATGCTTGATTCAAAATTGGACAAATCCAAAATCAATGAAATCGTTTTGGTTGGA 30626 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTT-CTTATTTCAATGGTAAAAA 552193 || || ||| | |||| || | || || | || | |||| | || ||| | Sbjct 30625 GGTTCAACACGTGTTCCCCGCATCCAACAATTGATTCGTGACAGATTTGGA-GGAAAAGA 30567 Query 552194 ATTAAATGAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCA 552251 ||| || || | | || || ||||| || ||||| |||||||| || ||||||| Sbjct 30566 ATTG--TGCAAATCCATCAACCCTGATGAAGCCGTTGCTTATGGTGCTGCTGTTCAAGCT 30509 Query 552252 GCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACT 552311 || ||| | ||| | || |||| | | || || | | | |||||| | Sbjct 30508 GCAATTTTGAAAGGAACCATTGGATCAAAAGGAGACGATCTTTTGTTGATTGATGTTGCA 30449 Query 552312 CCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAAT 552371 || | || ||||| | ||||| | || ||| | |||||| | | ||| | ||||| Sbjct 30448 CCATTGTCACTTGGACTTGAAACCGCAGGTGGTGTAATGACTGTTTTGATCAAGAGAAAC 30389 Query 552372 ACTACTATTCCTTGTAAAAAATCTCGTGTATTTT-CTACGTATTCAGATAATCAAACTGC 552430 | | ||||| || ||||| | | |||| | || || ||||||||||| || Sbjct 30388 TCACCAATTCCGTGCGGGAAATCA-GAGGATTTCACAACATACAGCGATAATCAAACAGC 30330 Query 552431 TGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGG 552490 |||| |||| || ||| ||||||||||||| || | || | | | || |||| | || Sbjct 30329 TGTTGAAATTAAAGTTTATGAAGGAGAAAGACAACTGACAAGACAAAACAATCTTTTGGG 30270 Query 552491 TACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTAC 552550 ||| || | | ||||| ||| | ||||| || | || ||||| | |||||||| | Sbjct 30269 TACATTCAGACTTGAAGGAATTGCACCTGCACCAAGAGGTGTACCAAAGATTGAAGTCAA 30210 Query 552551 TTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 || ||| | ||||| ||||| ||| | | ||| ||||| ||||| Sbjct 30209 ATTTGATGTTGATGCAAATGGTATTCTTCAAGTGTCTGCTGAAGATAA 30162 >seq11 Length=282251 Score = 174 bits (192), Expect = 1e-37 Identities = 402/601 (67%), Gaps = 20/601 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | || || ||| | ||||| |||||| || |||||||| ||| ||| | | Sbjct 250151 AGCTGTCGGAATTGATCTTGGAACAACATATTCATGCGTTGGTGTGTGGAGAAACGAAAC 250210 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||| || || | ||||||||||| || ||||| |||||||| | ||| ||||||| Sbjct 250211 TGTTGAGATCATCCCAAATGATCAAGGAAATAGAACGACTCCATCCTGGGTTGCTTTCAC 250270 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| || | ||| |||||||||| ||||| | |||| | || || || Sbjct 250271 TCCAACGGAGCGTTTGATTGGTGATGCTGCAAAGAACCAAGGAAACATGAACCCAGAAAA 250330 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | |||||| ||| | | |||||| | |||| ||||| ||||| Sbjct 250331 CTCTCTCTTTGATAGCAAAAGAATGATTGGACGTCGTTTCTCAGATTCCGAAATTCAGAA 250390 Query 550231 AGATATGAAGCATTGGCCTTTCCAA---ATTGTTAATGTTTCTGGAAAACC-TTATAT-- 550284 ||||| ||||||||||| ||| || |||| || | ||||| || | ||| Sbjct 250391 CGATATCAAGCATTGGCCATTCAAAGTCATTGAGAAAG---ACGGAAAGCCAATGTATCA 250447 Query 550285 --TGAAGCTACTCA--TGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTA 550340 | ||| ||| | |||| | ||| ||||||| |||||| ||||| || | Sbjct 250448 GGTCAAG-TACAAAGGTGAAACA------AAAGAATTTTCGCCAGAAGAAATTAGCTCCA 250500 Query 550341 TGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATG 550400 |||| | || ||||| ||| | |||| | |||| || |||| || || | Sbjct 250501 TGGTGCTCTCAAAGATGAAGGAAATTTCTGAAGCTTATCTTGGACATAAAGTCACAGAAG 250560 Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460 | || | ||| ||||| ||||| || || |||||||| ||||| || ||||||| Sbjct 250561 CTGTTGTGACTTGCCCAGCTTATTTCAACGATAGCCAACGTCAGGCTACAAAGGATGCTG 250620 Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTG 550520 || ||||||||| | ||||| || | || ||||| ||||| || || ||||| ||| Sbjct 250621 GAACAATTGCTGGAATGAATGTGCTCAGAATCATCAACGAACCAACAGCATCTGCAATTG 250680 Query 550521 CATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAG 550580 ||||||| || || || | || || ||| | ||||| ||||| || |||| |||| Sbjct 250681 CATATGGTCTAGACAAGAAGAAAGACACTGAATTGAATGTTCTCATTTTCGATTACGGAG 250740 Query 550581 G 550581 | Sbjct 250741 G 250741 Score = 132 bits (146), Expect = 4e-25 Identities = 462/710 (65%), Gaps = 16/710 (2%) Strand=Plus/Plus Query 551902 GTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCA 551961 ||||| | ||||||||||||||| | || || |||| |||||| || || ||| | | Sbjct 250918 GTCGTTTGAGAACTGCTTGCGAACGTGCAAAGAGAGCACTTTCAACTTCAACACAAGCAA 250977 Query 551962 CTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCT--ATTTCGAGGGC 552019 | |||||| | ||||| | ||||| ||| |||||| || |||| ||| | | || Sbjct 250978 CAATTGAAATCGATTCTCTCTTTGAAGGACTTGATTTCAA--CGCCGTGATTACTCGTGC 251035 Query 552020 CAAATTTGAAGATATTTGTTCTGATCTC--TTTAGAAAAACAATTGAACCAGTAGAACAA 552077 ||||| ||| | |||| | ||| | || |||||| | ||||| | || | Sbjct 251036 AAAATTCGAACAA--TTGTGCGAATCACAATTCAGAAAATGCCTGGAACCGTTGGATCGT 251093 Query 552078 GTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGA 552137 | | || ||||| | || ||||| || | ||||||| || | || || || Sbjct 251094 GCGATGCTGGACTCAAAATTGGACAAATCACAAATCAATGAAATCGTTTTGGTCGGAGGT 251153 Query 552138 TCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTT-ATTTCAATGGTAAAAAATT 552196 || || | ||||| || | || || | || | |||| | || ||| |||| Sbjct 251154 TCAACTCGTGTTCCTCGCATCCAACAATTGATTCGTGATAGATTTGGA-GGAAAAGAATT 251212 Query 552197 AAATGAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254 || || | | || || ||||| || ||||| |||||||| || ||||||| || Sbjct 251213 G--TGCAAATCCATCAACCCTGATGAAGCCGTTGCTTATGGTGCTGCTGTTCAAGCTGCA 251270 Query 552255 ATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCT 552314 ||| | ||| | || |||| | | || || | | | |||||| | || Sbjct 251271 ATTTTGAAAGGAACCATTGGATCAAAAGGAGACGATCTTTTGTTGATTGATGTTGCACCA 251330 Query 552315 CTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACT 552374 | || ||||| | ||||| | || ||| | ||| | | | ||| | ||||| | Sbjct 251331 TTGTCACTTGGACTTGAAACCGCAGGTGGTGTCATGTGTGTTTTGATCAAGAGAAACTCA 251390 Query 552375 ACTATTCCTTGTAAAAAATCTCGTGTATTTT-CTACGTATTCAGATAATCAAACTGCTGT 552433 | ||||| ||| |||||| | | |||| | || || || |||||||| |||| Sbjct 251391 CCAATTCCATGTGGAAAATCA-GAGGATTTCACAACATACAGCGACAATCAAACATCTGT 251449 Query 552434 TACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTAC 552493 | || || ||| |||||||||||| | | || | | | || |||| | || || Sbjct 251450 TGTTATAAAAGTTTATGAAGGAGAAAGGCAGATGACAAGACAAAACAATCTTTTGGGCAC 251509 Query 552494 TTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTT 552553 || || || || |||||| |||||||||| | ||||| || ||||||| |||| || Sbjct 251510 ATTCAAATTGGATGGTATTGCTCCTGCTCCAAGAGGAGTTCCAAAAATTGAGGTTAAGTT 251569 Query 552554 CGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTA 552603 || || ||||| ||||| ||| | | ||| ||||| |||||| ||| Sbjct 251570 TGACATTGATGCAAATGGTATTCTTCAAGTGTCTGCTGAGGATAAAGCTA 251619 >seq216 Length=89640 Score = 147 bits (162), Expect = 2e-29 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 |||||||| | || |||||| || ||||| || |||||||| |||||| Sbjct 83288 ACAAGATGCAATGTGGCTTCTTTTTGGATGTTGTAGTCCTGGAGAGTTCTACCATCTTCG 83347 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 ||||||||||| || |||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct 83348 AGTTGTTTTCCTGCGAAAATAAGTCTTTGCTGATCCGGAGGGATTCCTTCCTTATCTTGA 83407 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTA 563445 |||||||| || || | |||||||| || | || |||||| |||| ||||| Sbjct 83408 ATTTTTTGCTTCACAGATTCAATTGTGTCTGCGTTTTCGACTTCGAGGGTAATTGTTTTT 83467 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || | || || || ||||||||||| Sbjct 83468 CCTGTCAATGTCTTCACAAAAATTTGCAT 83496 >seq15 Length=259596 Score = 113 bits (124), Expect = 4e-19 Identities = 122/159 (77%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTA-CTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||| || || | || || ||| ||| |||| | |||||| ||||| || || | Sbjct 136021 AGACGAAGCACCAAGTGGAGTGTAGCTTCCTTTTG-AATATTATAATCTTGAAGTGTACG 136079 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| ||||||||||| || || ||||||||||| ||||| |||||||||||||| Sbjct 136080 ACCATCTTCGAGTTGTTTTCCAGCGAAGATAAGTCTTTGTTGATCTGGAGGAATTCCTTC 136139 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC 563414 ||||| ||||||||||| || || | || || ||||| Sbjct 136140 CTTATCCTGAATTTTTTGCTTCACAGATTCGATGGTATC 136178 >seq528 Length=44320 Score = 109 bits (120), Expect = 4e-18 Identities = 121/159 (76%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTA-CTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||| || || | || || ||| ||| |||| | |||||| ||||| || || | Sbjct 9239 AGACGAAGGACCAAGTGGAGTGTAGCTTCCTTTTG-AATATTATAATCTTGAAGTGTGCG 9297 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| ||||||||||| || || ||||||||||| ||||| |||||||||||||| Sbjct 9298 ACCATCTTCGAGTTGTTTTCCAGCGAAGATAAGTCTTTGTTGATCTGGAGGAATTCCTTC 9357 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC 563414 ||||| ||||| ||||| || || | ||||| || || Sbjct 9358 CTTATCCTGAATCTTTTGCTTCACAGATTCAATAGTGTC 9396 >seq858 Length=26070 Score = 98.7 bits (108), Expect = 8e-15 Identities = 173/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 368608 ttttGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGTATA 368667 || |||||||| ||| | ||| | ||| | || ||||||||||||| ||| || Sbjct 6079 TTCTGGGGAACACCACTGCCAATTTGGGAGAGCGAAGATGGTGAAGAAAGAGTTGTGATC 6138 Query 368668 GGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACATATT 368727 || ||||| || || ||||| | | || | || || | ||| |||| | | Sbjct 6139 GGATCAATAGCTGAGTTAGAAGAAGCAACAGGCATTAAAGGAATCACAGATATACACACT 6198 Query 368728 GATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTATTGTCTCGAGTT 368787 ||| | ||||| || | ||||| ||||| ||||||||||| | | |||| Sbjct 6199 GATTTTGTGGATCAAATGACTATTCCGTCAAAAAAAGGAAAAGGCCTCCTTAAAAGAGTC 6258 Query 368788 GAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTAT 368847 | ||| || || ||||||||||| ||||||||||| ||||||| || |||| || ||| Sbjct 6259 GGAGGTGTGTTTGATTGCTGGTTCGAATCAGGTTCAATGCCTTTTGCCCAAAATCACTAT 6318 Query 368848 CCATTTGATAAC 368859 || || || ||| Sbjct 6319 CCGTTCGAAAAC 6330 >seq424 Length=53319 Score = 98.7 bits (108), Expect = 8e-15 Identities = 234/351 (67%), Gaps = 2/351 (1%) Strand=Plus/Plus Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||||||||||||||||| ||| || ||||| || ||| ||| | || || | || | Sbjct 13338 GATATGAAGCATTGGCCATTCAAAGTTGTTGATCGTTCGGGATAGCCA-ATGTATCAGGT 13396 Query 550292 -ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAAT 550350 | | |||| ||| ||||||||||||| |||| || ||||| | Sbjct 13397 CAAATACAAAGGTGAAACAAAAGAATTTTCACCAGAGGAAATCAGCTCAATGGTCCTGTC 13456 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 |||||| ||| | || | || | |||| || |||| || || || || | || Sbjct 13457 GAAAATAAAAGACCTTTCCGAAGTTTATCTTGGACACAAAGTCACAGAAGCTGTTGTGAC 13516 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 | ||||| || || || || ||||| || || || || ||||||||| ||||| Sbjct 13517 TTGCCCAGCCTACTTCAACGATAGCCAACGCCAGGCCACAAAGGATGCTGGAACAATTGC 13576 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 || || || || || | || |||||||| || || ||| ||||| |||| ||||| | Sbjct 13577 AGGGCTGAACGTCCTCAGAATCATCAATGAGCCAACAGCTTCTGCAATTGCCTATGGTTT 13636 Query 550531 TGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 |||||| | || || ||| | || || ||||| || |||| ||||| Sbjct 13637 GGATAAAAAGAAAGAGTCGGAAATGAACGTTCTCATTTTCGATTACGGAGG 13687 >seq373 Length=59074 Score = 86.0 bits (94), Expect = 5e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 563290 GTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGT 563349 ||||||||||| || | |||||| || | |||||||| |||| ||||| || Sbjct 44815 GTAATATTGTAGTCCGAAAGAGTTTTTCTGTTATCAAGTTGAATTCCTCCAAAAGCGAGA 44874 Query 563350 CTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATT 563409 |||| ||| |||| ||||||||||| ||||||||||| ||||| |||| ||||| Sbjct 44875 ATTTGTAAATCTAGAGGGATTCCTTCTTTCTCTTGAATTTTCTGTTTCACTGATTCAATG 44934 Query 563410 GTATC 563414 ||||| Sbjct 44935 GTATC 44939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029185206951550