Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq216 113 8e-20 >seq216 Length=89640 Score = 113 bits (124), Expect = 8e-20 Identities = 167/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTC- 193189 |||||||| | | || | || ||||||||||| || ||||| || || ||||| Sbjct 83267 ATACCACCACGAAGTCTCAACACAAGATGCAATGTGGCTTCTTTTTGGATGTTGTAGTCC 83326 Query 193190 -GGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAG 193248 ||| | |||||| ||| || | ||||||||| || ||||| | ||| || ||||| | Sbjct 83327 TGGAGA--GTTCTACCATCTTCGAGTTGTTTTCCTGCGAAAATAAGTCTTTGCTGATCCG 83384 Query 193249 GAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACT 193308 |||| |||||||| |||||||| ||||| || | | | ||| || || | | Sbjct 83385 GAGGGATTCCTTCCTTATCTTGAATTTTTTGCTTCACAGATTCAATTGTGTCTGCGTTTT 83444 Query 193309 CAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 | ||||| || || || ||||| ||||| | || || ||||| |||||||| || Sbjct 83445 CGACTTCGAGGGTAATTGTTTTTCCTGTCAATGTCTTCACAAAAATTTGCATGTT 83499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899630840300400