Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq216 96.9 3e-15 >seq216 Length=89640 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| || || |||||||| || || ||| ||| ||| || | ||||| || ||| Sbjct 83077 CTCCTTTTGGATATTGTAGTCTTGCAATGTGCGACC-GTCTTCCAATTGCTTTCCAGCGA 83135 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || || | ||| ||||| ||||| || ||||||||||| ||||| ||||| | || Sbjct 83136 AGATAAGTCTCTGTTGGTCCGGAGGAATACCTTCCTTGTCTTGAATCTTCTGCTT-AACT 83194 Query 133588 G-CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | ||||| ||||| | | || || || | ||||| |||||| || |||| |||||| Sbjct 83195 GACTCAATTGTGTCAGCGTTTTCAACCTCAAGGGTGATGGTTTTTCCAGTCAAAGTTTTC 83254 Query 133647 ACGAAAATCTGCAT 133660 || || |||||||| Sbjct 83255 ACAAAGATCTGCAT 83268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483408140417800