Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq72 96.9 5e-15 >seq72 Length=150145 Score = 96.9 bits (106), Expect = 5e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 87325 ATAGGTATAGACGAGGGTCAGTTCTTCCCAGACATAGTGGAATTCTGCGAA-TACATGGC 87383 ||||| ||||| || || || || | ||||| |||||||||| || ||| | || | | Sbjct 53678 ATAGGAATAGATGAAGGACAATTTTATCCAGATTTAGTGGAATTTTGTGAAATGCAAG-C 53620 Query 87384 AAACAATGGAAAAATAGTTATAGTGGCTGCATTAGATGGAACATTTCAACGAAAACCATT 87443 || ||||||||| || || || || || | ||||||||||||||| |||||| ||| Sbjct 53619 GAATTCTGGAAAAATTGTAATTGTTGCAGCTCTTGATGGAACATTTCAAAGAAAACGATT 53560 Query 87444 TACAACTATTTCGAATCTTATTCCGTTATCCGAAATGGTAGTAAAACTGACAGCGGTATG 87503 || | || |||| |||||||||| |||| || | |||||| | ||||| || Sbjct 53559 TAATGATGTTGTTGATCTAATTCCGTTATGCGAATCAGTTGAAAAACTCAATGCGGTCTG 53500 Query 87504 TA 87505 || Sbjct 53499 TA 53498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686890811575800