Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq58 84.2 3e-11 >seq58 Length=166100 Score = 84.2 bits (92), Expect = 3e-11 Identities = 179/266 (67%), Gaps = 6/266 (2%) Strand=Plus/Minus Query 179032 AGTTTTGTGAAGATGTACCTCGTTTGAGACGCA---TCTTTGCCACCCATGAGACGCGTC 179088 || |||||||| ||||| | | ||||||| ||||||||||| ||||| || Sbjct 92175 AGCTTTGTGAAAATGTAACGAGC---AGACGCAGCATCTTTGCCACCTGACAGACGTGTA 92119 Query 179089 CCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCC 179148 || ||||||||| | || |||| |||||||| ||||| || | | | ||| || Sbjct 92118 CCGAATTGACCAGAAGGAACAAGAAGATTGATGTTGTTGCTTCCGACGAAATCACGTGCA 92059 Query 179149 AACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAAGCCGACTTGTCCGCC 179208 | || |||||||| | || || ||||||||||||||| | || || || Sbjct 92058 AGGTTAACAATCGTTGACTGAAGTGACTGTTCACCGTGATGGTATGATGATACTTCTGCA 91999 Query 179209 ACATATGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCA 179268 || ||| | | | ||| || || || || |||| ||| || || | ||||| ||| Sbjct 91998 ACGTATCCAGAAAGCTGGGCAACTTTAATTTCATTCTTAAGATTACGCTTAAAGCAGGCA 91939 Query 179269 TACATCACCTTTCTTTGTGAAGGCTT 179294 || | | ||||| |||| |||||| Sbjct 91938 TATAAAATCTTTCGTTGTCCAGGCTT 91913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618419004728200