Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq216 89.7 4e-13 >seq216 Length=89640 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 27784 AGTAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA 27843 || || ||||||||||||||||| || | || || ||| ||||| | || |||||| Sbjct 83502 AGAAACATGCAAATTTTTGTGAAGACATTGACAGGAAAAACAATTACCCTCGAAGTCGAA 83443 Query 27844 AGCACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATG 27903 | | | ||| | |||| || || |||||||| || || ||||| | || | Sbjct 83442 AACGCAGACACAATTGAATCTGTGAAGCAAAAAATTCAAGATAAGGAAGGAATCCCTCCG 83383 Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCC--G 27961 || |||||| | | ||||| || ||||||||| | || || | | | | ||| | Sbjct 83382 GATCAGCAAAGACTTATTTTCGCAGGAAAACAACTCGAAGATGGTAGAA--CTCTCCAGG 83325 Query 27962 ATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | ||||||||||||||||| ||| |||||| | || ||| | | ||||| || Sbjct 83324 ACTACAACATCCAAAAAGAAGCCACATTGCATCTTGTGTTGAGACTTCGTGGTGG 83270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355853313832065