Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq216 100 2e-16 >seq216 Length=89640 Score = 100 bits (110), Expect = 2e-16 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || || || | ||| ||||| | ||||| || | ||||||||| || ||||| || Sbjct 83270 CCACCACGAAGTCTCAACACAAGATGCAATGTGGCTTCTTTTTGGATGTTGTAGTCCTGG 83329 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | |||||| | |||||| || || | ||||| ||||| || || || Sbjct 83330 AGAGTTCTACCATCTTCGAGTTGTTTTCCTGCGAAAATAAGTCTTTGCTGATCCGGAGGG 83389 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT- 101190 | ||||| || || ||||||||| |||||| | | || |||| |||| | Sbjct 83390 ATTCCTTCCTTATCTTGAATTTTTTGCTTCACAGATTCAATTGTGTCTG----CGTTTTC 83445 Query 101191 ---TTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||||| |||||| ||||| || |||||||| || | |||||||||||| Sbjct 83446 GACTTCGAGGGTAATTGTTTTTCCTGTCAATGTCTTCACAAAAATTTGCAT 83496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409650340207605