Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq72 96.9 5e-15 >seq72 Length=150145 Score = 96.9 bits (106), Expect = 5e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 95785 ATAGGTATAGATGAGGGACAATTCTTTCCTGACATAGTAGAATTTTGTGAACTCATGGCA 95844 ||||| |||||||| |||||||| | ||| || |||| |||||||||||| | || Sbjct 53678 ATAGGAATAGATGAAGGACAATTTTATCCAGATTTAGTGGAATTTTGTGAAATGCAAGCG 53619 Query 95845 AACAATGGAAAAATAGTTATAGTGGCAGCATTAGATGGAACATTTCAACGCAAGCCGTTT 95904 || ||||||||| || || || ||||| | ||||||||||||||| | || | ||| Sbjct 53618 AATTCTGGAAAAATTGTAATTGTTGCAGCTCTTGATGGAACATTTCAAAGAAAACGATTT 53559 Query 95905 ACGACTATTTCGAATCTTATTCCGTTATCTGAAATGGTAGTAAAACTGACAGCAGTATGT 95964 | | || |||| |||||||||| ||| || | |||||| | || || ||| Sbjct 53558 AATGATGTTGTTGATCTAATTCCGTTATGCGAATCAGTTGAAAAACTCAATGCGGTCTGT 53499 Query 95965 A 95965 | Sbjct 53498 A 53498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694650608360800