Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monocercomonoides_20sp._20PA203_20[genbank_20GCA_5F001643675.1_20201 6-05-13] 2,095 sequences; 74,721,868 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq72 111 2e-19 seq126 82.4 8e-11 >seq72 Length=150145 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64433 ATTGGAATTGATGAAGGGCAATTTTTTACTGATATAGTTGAATTTTCTGAAAATATGGCC 64492 || ||||| |||||||| ||||||| | | ||| |||| ||||||| ||||| || Sbjct 53678 ATAGGAATAGATGAAGGACAATTTTATCCAGATTTAGTGGAATTTTGTGAAATGCAAGCG 53619 Query 64493 AATAAAGGAAAAATTGTAATTGTTTCAGCGTTAGATGCGACATATAAAAGAGAACCATTT 64552 ||| |||||||||||||||||| |||| | |||| |||| | ||||| ||| |||| Sbjct 53618 AATTCTGGAAAAATTGTAATTGTTGCAGCTCTTGATGGAACATTTCAAAGAAAACGATTT 53559 Query 64553 GGTAATATCCTAAATCTAGTTCCATTAGCTGAAAAAGTAATAAAATTAAATGCTATATGT 64612 | || | | ||||| |||| ||| ||| ||| |||| | ||||| | ||| Sbjct 53558 AATGATGTTGTTGATCTAATTCCGTTATGCGAATCAGTTGAAAAACTCAATGCGGTCTGT 53499 Query 64613 AAAATATGTTTCAAAGATGCTGCATTTACTAAAAGA 64648 | | | || | || |||||||||||| || ||| Sbjct 53498 ACAGTTTGCGGAAGAGCTGCTGCATTTACAAAGAGA 53463 >seq126 Length=114318 Score = 82.4 bits (90), Expect = 8e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 64427 GATGTTATTGGAATTGATGAAGGGCAATTTTTTACTGATATAGTTGAATTTTCTGAAAAT 64486 ||||| |||||| |||||||||| ||||||| | ||||| || | ||||||| |||| | Sbjct 63366 GATGTAATTGGAGTTGATGAAGGACAATTTTATCCTGATTTATTGGAATTTTGTGAAGCT 63307 Query 64487 ATGGCCAATAAAGGAAAAATTGTAATTGTTTCAGC 64521 || ||| | ||||||||||| ||||| || || Sbjct 63306 CAAGCAAATGATGGAAAAATTGTTATTGTATCCGC 63272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521474343533000