Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq120 95.1 1e-14 >seq120 Length=320511 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| | ||||| ||||||||||| || ||||| || || | || || || || | | Sbjct 60815 ATGCAATTGTTTGTGAAAACCTTAACTGGAAAAACTATCACATTGGAAGTAGAGTCCAAC 60756 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 ||| | || | ||| ||| |||||||||| ||||| || | || | || || Sbjct 60755 GACTCGATTGAGAATGTGAAGAGCAAAATTGCTGATAAAGAGGGAATTCCAGCCGATCAA 60696 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||||||||| || || ||||||||| |||| ||| | || || ||||||| | Sbjct 60695 CAACGTTTAATTTACGCTGGCAAACAATTGGAGGATGGAAGAACAATCTCTGATTACAAC 60636 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 | || ||||| | || |||| | ||||| || | || ||||| Sbjct 60635 TTGCAAAAAGATTCGACCATTCACCTTGTGTTGAGACTTCGTGGAGG 60589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418301073702080