Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq93 111 3e-19 >seq93 Length=103736 Score = 111 bits (122), Expect = 3e-19 Identities = 154/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 101853 TCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCA-ATAACGATTTGGCGGAA 101911 |||| ||||||| | |||||| | || ||||| ||| | ||||| || || ||| Sbjct 85076 TCAA-AAGAAGGCTCGTTGGGCTTTGAAATGGAT-CAACTCGGATAACTTGTTTGCTGAA 85019 Query 101912 CTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATT 101971 | | | ||||||||||| || ||||| |||||||||||||| | ||| ||||| Sbjct 85018 CGATTGATTGCCTTTGCTTGTGTGGAAGGTATCTTCTTTAGTGGATCTTTCTGTTCCATC 84959 Query 101972 TTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCT 102031 || ||||| ||||| || ||| | ||||||| | |||| ||||||||| || |||||| Sbjct 84958 TTTTGGATGAAGAAGAGAGGTTTGATGCCTGGATTGACCTTCTCCAATGAATTGATTTCT 84899 Query 102032 AGGGACGAAGGTCTTCATCGCGACTTTGCATG 102063 | || ||||| | || |||||||| || Sbjct 84898 CGAGATGAAGGATTACACACGGACTTTGCTTG 84867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989576722228170