Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq156 98.7 2e-16 >seq156 Length=97175 Score = 98.7 bits (108), Expect = 2e-16 Identities = 169/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| || |||||||||||||| || | | |||| | | || || | Sbjct 93522 GAGATAACATTGCTGGTATCACCAAGCCAGCCATTAGAAGATTGGCAAGAAGAGGAGGTG 93463 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| | || ||| ||||||| |||| |||| ||| ||||||| ||| | Sbjct 93462 TGAAGCGTATTTCCGGACAAATCTATGATGAGACTCGTACTGTCTTGAAGAACTTTTTGG 93403 Query 16578 AGACCGTTATCCATGATGCT-TTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | || || |||||| || || || || || ||||| | | | |||||||| || Sbjct 93402 AAAATGTGATTAGAGATGCTGTTACA-TACACTGAACACGCAAGAAGAAAGACTGTTACA 93344 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 ||||||||| | ||||| || ||||| | ||||| | | | |||||||| ||| | Sbjct 93343 TCCATGGATGTTGTCTACGCCTTGAAGAGACAAGGAAGAACCCTCTATGGTTTCGGATAT 93284 Query 16697 TAA 16699 ||| Sbjct 93283 TAA 93281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074675187782