Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= NC_007052.1 Length=45861 Score E Sequences producing significant alignments: (Bits) Value seq510 1036 0.0 >seq510 Length=800 Score = 1036 bits (1148), Expect = 0.0 Identities = 626/655 (96%), Gaps = 4/655 (1%) Strand=Plus/Plus Query 25881 TATTAATCTCTATCACCGTTGAAAATAGAGTTTCTAACAATAACATAATCTACAGTACGT 25940 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 147 TATTAATCTCTATCACCGTTGAAAATAGAGTTTCTAACAATAACATAATCTACAGTACGT 206 Query 25941 AATGATTTCAAGTCTTTTCCACCGGCATATGAAATTGAGCTTTGTAAATCTTGTTGCATT 26000 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207 AATGATTTCAAGTCTTTTCCACCGGCATATGAAATTGAGCTTTGTAAATCTTGTTGCATT 266 Query 26001 TCTTTTAAGGTATCCATTAATG-ACCCCTTATGT-TCTACAAACAtttttttACCTTCT- 26057 |||||||||| || | | ||| | || | ||| ||||||||||||||||| |||| Sbjct 267 TCTTTTAAGGAATGAAATTATGTATTCCAT-TGTATCTACAAACATTTTTTTTTGTTCTT 325 Query 26058 ACATTTTTATGTTCGCCTTTTTGAAATTCAGATGCACTACCAAAATATTCTTTATACTGT 26117 ||| || || | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 326 ACAATTATACCAAATCTTTTTTAAAATTCAGATGCACTACCAAAATATTCTTTATACTGT 385 Query 26118 TTACCATCAAGTTCTACAGTTTCACCAGGTGATTCTTCGTGTGCCGCAAATAATGAACCA 26177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 386 TTACCATCAAGTTCTACAGTTTCACCAGGTGATTCTTCGTGTGCCGCAAATAATGAACCA 445 Query 26178 ATCATGACCATTGATGCACCAAATCTAATTGACTTAGCGATGTCGCCATGCGTTCTTATG 26237 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 446 ATCATGACCATTGATGCACCAAATCTAATTGATTTAGCGATGTCGCCATGCGTTCTTATA 505 Query 26238 CCACCATCGGCAATCAAAGGTTTACGAGCTGCTTTACTACATATGTTTAATGCCGCTAAC 26297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 506 CCACCATCGGCAATCAAAGGTTTACGAGCTGCTTTACTACATATGTTTAATGCCGCTAAC 565 Query 26298 TGCCAACCACCAGTACCAAAACCTGTTTTAATCTTTGTAATACAAACTCTACCAGGACCT 26357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 566 TGCCAACCACCAGTACCAAAACCTGTTTTAATCTTTGTAATACAAACTCTACCAGGACCT 625 Query 26358 ATACCGACTTTGGTAGCATCAGCACCAGCATTTTCTAATTCTCTAACACCTTCTGGCGTA 26417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 626 ATACCGACTTTGGTAGCATCAGCACCAGCATTTTCTAATTCTCTAACACCTTCTGGCGTA 685 Query 26418 CCAACATTACCAGCAATAACAAAACTATCAGGTATATGGGTTTTAATATGTTTAATCATG 26477 ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct 686 CCAACATTACCAGCAATAACAAAACTATCAGGTATATGGTTTTTTATATGTTTAATCATG 745 Query 26478 TTTATCACTGAATCTGAGTGACCATGCGCAATATCTATTGTAATATATTCGGGGA 26532 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 746 TTTATCACTGAATCTGAGTGACCATGCGCAATATCTATTGTAATATATTCGGGGA 800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146632600508724