Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= NC_007458.1 Length=37253 Score E Sequences producing significant alignments: (Bits) Value seq423 149 1e-31 >seq423 Length=1182 Score = 149 bits (164), Expect = 1e-31 Identities = 229/324 (71%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 32004 TTATATGTAAAAAGTCATATGTTTTTTATCTTCTTTATAGTACTCTAACCGGTTTTGCAA 32063 |||| ||||||| ||||||||| |||| | |||||||| || | ||| | || | | Sbjct 589 TTATTTGTAAAATGTCATATGTGGTTTAGCCTCTTTATAATAATTTAATCTGTCCTCAAG 530 Query 32064 AGTGCCAGTGTGGAACTCAAACTTATGGCCATCTGGATCTGTAAAGTAAAGAGATCTTTG 32123 |||||||| || || || | |||||| ||||| || || |||||||||| ||| | Sbjct 529 TGTGCCAGTATGTAATTCTAGCTTATGACCATCAGGGTCGGTAAAGTAAATTGATTGTCT 470 Query 32124 GTCTCTCTCATCTCTTTCTCGGCCAGGTAAAATATTAACATCATTTTGAATTAATACTTC 32183 ||||| |||||| ||| || ||||||||| || | ||| | ||||| | Sbjct 469 ATCTCTAATATCTCTAACTCTTCCTTCTAAAATATTCACGTTATTATCTTTTAATCTCTG 410 Query 32184 TTTTAAATGGTCTAAT--GCT-TCATTAGTTACAGTGAAAGCCATATGTGTATAAGATTG 32240 | ||| | ||| ||| |||| || ||||||||| ||||||||||| || Sbjct 409 ATGCCAATATTTAAATTCGCTGTCATC---TATAGTGAAAGCTATATGTGTATATGAAAA 353 Query 32241 CTTAATTTCATTTCTTGGTATATCTTCTTCAACATTTAAAGCAATCCATAATCCATTTAA 32300 | ||||||||| | ||||||||||| ||| |||||||||||||||||| || | Sbjct 352 GTGAATTTCATTACGTGGTATATCTTTTTCTTCATTTAAAGCAATCCATAGGCCTGCAAG 293 Query 32301 ATCAAAATACGCTAATTTTCTACC 32324 |||||||| || |||| |||| Sbjct 292 CTCAAAATAAGCAGTTTTTTTACC 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119087188266420