Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq82 84.2 2e-11 >seq82 Length=211372 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGAGTCCTCTAGCTGCTTGCC 131096 || || ||||||||||||||||| || || ||| | || | || || | ||||| || Sbjct 147736 GTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCA-TCTTCCAATTGCTTTCC 147794 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTG-CT 131155 || |||| || | || || || ||||| || ||||| ||||| ||| | | || || Sbjct 147795 GGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC-TTGAATCTTTGACT 147853 Query 131156 TGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAG 131215 ||| | ||| | || ||| |||| |||| || | || | ||| |||||||| | | Sbjct 147854 TGACATTCTCGATGGTGTCGTTGGATTCGACCTCCAAAGTGATGGTCTTACCGGTCAAGG 147913 Query 131216 TTTTTACGAAAATCTGCAT 131234 | || |||||||| ||||| Sbjct 147914 TCTTAACGAAAATTTGCAT 147932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009413308160