Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= NC_019507.1 Length=182833 Score E Sequences producing significant alignments: (Bits) Value seq558 82.4 9e-11 >seq558 Length=819 Score = 82.4 bits (90), Expect = 9e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 101318 AAAACGACATAGTAATGGACtttttttGCAGGAAGTGGCACTACCCTAGCTGTTGCCCAT 101377 |||| || || ||| | || ||| ||| || || |||||| | ||| || || ||| Sbjct 591 AAAATGATATTGTATTAGA-TTTCTTTATGGGTTCTGCCACTACTCAAGCGGTAGCACAT 533 Query 101378 AAAATGAAACGCAAATGGATAGGCATAGAACAAATGGATTATATAGAAACTATCACAAAA 101437 |||||||| || ||| || || | ||||||||||| || || | ||| | | | Sbjct 532 AAAATGAATCGTCAATATATTGGTGTTGAACAAATGGACTACATTAATACTGTATCTATC 473 Query 101438 GAAAGACTCAAAAAAGTCATAGAAGGTGAGCAAGGTGGTATCAGCAAAGCAGTAAATTGG 101497 ||| | ||||||| || || ||||||||||| ||| | | | || ||||| Sbjct 472 CCAAGGTTACAAAAAGTTATTGAGGGTGAGCAAGGCGGTGTTTCAACTGATTTAGATTGG 413 Query 101498 CAAGGTGGTGGAAGTTTTGTTTATGCTGAA 101527 ||||||||||| |||||| |||| |||| Sbjct 412 CAAGGTGGTGGTTCTTTTGTATATGTTGAA 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584933403072720