Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= NC_020199.1 Length=47252 Score E Sequences producing significant alignments: (Bits) Value seq524 86.0 2e-12 seq565 84.2 7e-12 >seq524 Length=239 Score = 86.0 bits (94), Expect = 2e-12 Identities = 47/47 (100%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 20694 GCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGG 20740 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCGGGGGCCCTTCGCTTGCAACGCGGATAAACTTTTATGAAAGGGGG 47 >seq565 Length=3067 Score = 84.2 bits (92), Expect = 7e-12 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 44268 AGGTAATAGAATAAGCAGTTTTGGTAAGTTTAGTGCAGTTTGATAATTGTATAT 44321 ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| Sbjct 2825 AGGTAATAGAATAAGCAGTTTTGGTAATTTTAGCGCAGTTTGATAATTATATAT 2878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151083770168232