Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20fowleri_20[genbank_20GCA_5F000499105.1_202013-11-25] 574 sequences; 27,791,290 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq510 370 3e-97 >seq510 Length=800 Score = 370 bits (410), Expect = 3e-97 Identities = 474/648 (73%), Gaps = 14/648 (2%) Strand=Plus/Minus Query 69418 CCAGAATATATCACTATTGATATAGCTCACGGACATTCTAATGCTGTTATTAAAATGATT 69477 || |||||||| || || ||||| || || || || || || | || || || |||||| Sbjct 798 CCCGAATATATTACAATAGATATTGCGCATGGTCACTCAGATTCAGTGATAAACATGATT 739 Query 69478 CAACATATAAAGAAGATGTTACCAAATAGTTTTGTTATTGCTGGTAATGTTGGTACACCT 69537 |||||||||| || |||| ||||||||||||||||||||||||||||||| || Sbjct 738 AAACATATAAAAAACCATATACCTGATAGTTTTGTTATTGCTGGTAATGTTGGTACGCCA 679 Query 69538 GAAGCTGTTCGTGAACTTGAAAATGCAGGCGCAGATGCTACAAAAGTTGGTATTGGCCCA 69597 |||| |||| | ||| | |||||||| || || |||||||| ||||| ||||| || || Sbjct 678 GAAGGTGTTAGAGAATTAGAAAATGCTGGTGCTGATGCTACCAAAGTCGGTATAGGTCCT 619 Query 69598 GGTAAAGTATGTATTACTAAAATCAAAACTGGTTTTGGTACTGGCGGCTGGCAGTTAGCT 69657 |||| ||| |||||||| || || ||||| |||||||||||||| || ||||||||||| Sbjct 618 GGTAGAGTTTGTATTACAAAGATTAAAACAGGTTTTGGTACTGGTGGTTGGCAGTTAGCG 559 Query 69658 GCATTGCGTTGGTGTTCAAAAGTAGCTACTAAACCAATAATTGCTGATGGTGGTATTCGT 69717 ||||| ||| |||| |||| |||||| | ||||| ||||||||||| | Sbjct 558 GCATTAAACATATGTAGTAAAGCAGCTCGTAAACCTTTGATTGCCGATGGTGGTATAAGA 499 Query 69718 ACTAACGGTGATATTGCTAAATCTGTACGTTTTGGCGCTTCAATGGTTATGATTGGTTCG 69777 || | || || || |||||||| | | ||||| || |||||||| ||||||||||| Sbjct 498 ACGCATGGCGACATCGCTAAATCAATTAGATTTGGTGCATCAATGGTCATGATTGGTTCA 439 Query 69778 CTATTTGCGGGTCACGAGGAATCACCAGGTGAGACGATAGaaaaaaaTGGTAAATTATAT 69837 ||||||||| ||||| |||||||| ||||| || ||||| |||||||| ||| Sbjct 438 TTATTTGCGGCACACGAAGAATCACCTGGTGAAACTGTAGAACTTGATGGTAAACAGTAT 379 Query 69838 AAAGAGTATTTTGGATCCGCTTCTGAATATCAAAAGGG---TGAAAAGAAGAACGTTGAA 69894 ||||| |||||||| || ||||||| | |||| | || | | || ||| | Sbjct 378 AAAGAATATTTTGGTAGTGCATCTGAATTTTAAAAAAGATTTG----GTATAA--TTGTA 325 Query 69895 GGAAAGAAGATACATG-TAGAATGTA-AAGGGAGTTTGAAA---GATACGTTGATTGAAA 69949 ||| || | | ||| | | | || || ||| | || || | || | |||| Sbjct 324 AGAACAAAAAAAAATGTTTGTAGATACAATGGAATACATAATTTCATTCCTTAAAAGAAA 265 Query 69950 TGGAACAAGATCTTCAATCTTCAATTTCTTATGCTGGTGGTAAAGATTTATTAGCAATTA 70009 || |||||||| | ||| |||||||| ||||| ||||| ||||| || | || | Sbjct 264 TGCAACAAGATTTACAAAGCTCAATTTCATATGCCGGTGGAAAAGACTTGAAATCATTAC 205 Query 70010 GAAATGTAGATTATGTCGTTGTTAAGAACTCCATTTTCAATGGAGATA 70057 | | |||||||||||| |||||| ||||| |||||||| || |||| Sbjct 204 GTACTGTAGATTATGTTATTGTTAGAAACTCTATTTTCAACGGTGATA 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591898692493952