Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20gruberi_20[genbank_20GCA_5F000004985.1_202010-01-20] 784 sequences; 40,964,085 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq10 149 9e-31 seq79 134 2e-26 seq52 134 2e-26 seq38 127 3e-24 seq36 125 1e-23 seq27 125 1e-23 seq54 122 1e-22 seq37 120 5e-22 seq81 116 6e-21 seq48 116 6e-21 seq28 116 6e-21 seq34 113 7e-20 seq74 111 2e-19 seq41 111 2e-19 seq18 111 2e-19 seq7 111 2e-19 seq87 107 3e-18 seq84 107 3e-18 seq14 105 1e-17 seq30 102 1e-16 seq60 89.7 8e-13 seq188 87.8 3e-12 seq16 87.8 3e-12 >seq10 Length=665159 Score = 149 bits (164), Expect = 9e-31 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGA 146109 |||||||| | ||| || || || || |||||||||| |||| || ||||| ||||| || Sbjct 188173 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTAGATTCCTTTTGA-ATATTGTAATCAGA 188231 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||| | ||| ||||||||||| |||||||||||||||||||| ||||| || || Sbjct 188232 TAAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 188291 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATC---TGAACTTTC 146226 |||||||||||| ||||| |||||| ||| ||| Sbjct 188292 AATTCCTTCTTTGTCTTGAATTTTAGACTTGACATTTTCAATAGTATCATTTGA---TTC 188348 Query 146227 TACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| || ||||| |||||||| || | |||||||| ||| |||||||| Sbjct 188349 AACTTCAAGAGTGATAGTTTTACCAGTGAGTGTTTTAACGAAAATTTGCAT 188399 Score = 127 bits (140), Expect = 3e-24 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| || || | ||| | ||| ||||| ||| || ||||||||||| || Sbjct 187945 CCACCTCTTAATCTCAAAACAAGATGAAGAGTTGATTCCTTTTGA-ATATTATAATCGGA 188003 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||| | ||| ||||||||||| ||||| |||||||| | ||| ||||| ||||| Sbjct 188004 TAATGTTCTTCCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGG 188063 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATC--TGAACTTTCT 146227 || ||||| |||||||| |||||| || | ||| Sbjct 188064 GATACCTTCCTTATCTTGAATCTTTGATTTGACATTTTCAATAGTATCATTGGA--TTCA 188121 Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| | ||| ||||| || |||||||||||||| | ||| |||||||| Sbjct 188122 ACTTCCAATGTAATTGTCTTTCCTGTTAATGTTTTGACGAAAATTTGCAT 188171 Score = 107 bits (118), Expect = 3e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||| | | ||| | |||||||| | || || ||||| || |||||||| Sbjct 273298 TTCCTCCTATTAATCTCCACACCAAATGAAGTGTTGAATCTTTCTGAATGTTATAATCAT 273357 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||||| ||| || ||||||||||||||||| || | |||||| ||||| ||| Sbjct 273358 TAATAGTTCTGCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCTTTGTTGATCTGGAA 273417 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||||||||| ||||| || Sbjct 273418 GAATTCCTTCCTTATCATG 273436 >seq79 Length=326815 Score = 134 bits (148), Expect = 2e-26 Identities = 114/138 (83%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGA 146109 |||||||| | ||| || |||||||| |||||||||| |||| || || ||||| ||||| Sbjct 172956 CCACCTCTCAATCTCAAAACCAAATGCAAAGTAGATTCCTTTTGA-ATGTTATAGTCTGA 173014 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || ||||| | ||| || ||||| || |||||||| ||||||||||| ||||| ||||| Sbjct 173015 GAGGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGG 173074 Query 146170 AATTCCTTCTTTATCTTG 146187 || ||||| |||||||| Sbjct 173075 GATACCTTCCTTATCTTG 173092 Score = 123 bits (136), Expect = 4e-23 Identities = 113/139 (81%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGA 146109 |||||||||||||| || ||||| || | ||| |||| |||| || ||||| ||||| || Sbjct 172728 CCACCTCTAAGTCTCAAAACCAAGTGGAGAGTGGATTCCTTTTGA-ATATTGTAATCAGA 172786 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGC-AAAAATCAATCTTTGCTGATCCGGAG 146168 | |||||| | ||| || ||||| || ||||| ||| ||||||||||| ||||| |||| Sbjct 172787 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAAGATCAATCTTTGTTGATCTGGAG 172846 Query 146169 GAATTCCTTCTTTATCTTG 146187 | || ||||| |||||||| Sbjct 172847 GGATACCTTCCTTATCTTG 172865 Score = 120 bits (132), Expect = 5e-22 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGA 146109 |||||||||||||| || ||||| || | ||| |||| |||| || ||||| ||||| || Sbjct 172500 CCACCTCTAAGTCTCAAAACCAAGTGGAGAGTGGATTCCTTTTGA-ATATTGTAATCAGA 172558 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | |||||| | ||| || ||||| || |||||||| || | |||||| ||||| || || Sbjct 172559 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATAAGTCTTTGTTGATCTGGTGG 172618 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| ||||| |||||||| Sbjct 172619 AATACCTTCCTTATCTTG 172636 >seq52 Length=331721 Score = 134 bits (148), Expect = 2e-26 Identities = 168/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| || ||||| || ||||| ||||| ||| || ||||| ||||| || Sbjct 185694 CCACCTCTTAATCTCAAAACCAAGTGCAAAGTTGATTCCTTTTGA-ATATTGTAATCAGA 185636 Query 146110 -AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||||||||| | ||| ||||||||||| ||||||||||| | |||||| ||||| || | Sbjct 185635 TAAGAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTG 185576 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATC--TGAACTTTC 146226 | || ||||| |||||||| ||||| || | ||| Sbjct 185575 GGATACCTTCCTTATCTTGAATTTTAGACTTGACATTTTCAATTGTATCATTGGA--TTC 185518 Query 146227 TACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| | |||||||||||| |||||||| ||||| | ||| |||||||| Sbjct 185517 AACTTCCAATGTGATTGTTTT-CCTGTTAAAGTTTTGACGAAAATTTGCAT 185468 Score = 131 bits (144), Expect = 2e-25 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| || || | ||| | ||| ||||| ||| || ||||||||||| || Sbjct 165077 CCACCTCTTAATCTCAAAACAAGATGAAGAGTTGATTCCTTTTGA-ATATTATAATCAGA 165135 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||| | ||| ||||||||||| |||||||||||||||||||| ||||| || || Sbjct 165136 TAATGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 165195 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATC--TGAACTTTCT 146227 ||| ||||| |||||||| ||||| || || || Sbjct 165196 AATACCTTCCTTATCTTGAATCTTTGATTTAACATTTTCAATTGTATCATTGGAC--TCG 165253 Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| | ||| ||||| || |||||||| ||||| | ||| |||||||| Sbjct 165254 ACTTCCAATGTAATTGTCTTTCCTGTTAAAGTTTTGACGAAAATTTGCAT 165303 Score = 122 bits (134), Expect = 1e-22 Identities = 169/240 (70%), Gaps = 6/240 (3%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| | ||||| || | || ||||| ||| || ||||||||||| || Sbjct 165533 CCACCTCTCAATCTGAGGACCAAGTGAAGGGTTGATTCCTTTTGA-ATATTATAATCAGA 165591 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||| | ||| ||||||||||| ||||||||||| || | ||| ||||| || || Sbjct 165592 TAATGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGG 165651 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATC--TGAACTTTCT 146227 |||||||| |||||||| |||||| || | ||| Sbjct 165652 GATTCCTTCCTTATCTTGAATCTTAGACTTGACATTTTCAATAGTATCATTGGA--TTCG 165709 Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTTATTAGAA 146287 ||||| | ||||| || || || ||||||||||||| ||| ||||||||| | ||| || Sbjct 165710 ACTTCCAAAGTGATAGTCTTTCCAGTTAATGTTTTAACGAAAATTTGCATTGTGTTATAA 165769 >seq38 Length=381539 Score = 127 bits (140), Expect = 3e-24 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| || ||||| || ||||||||||| ||| || || |||||||| || Sbjct 330693 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGA-ATGTTATAATCGGA 330635 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||| | ||| || |||||||| |||||||||||||| | ||| ||||| || || Sbjct 330634 CAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGG 330575 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATC--TGAACTTTCT 146227 ||||||||||| ||||| ||||| || | ||| Sbjct 330574 GATTCCTTCTTTGTCTTGAATCTTACTCTTGACATTTTCAATTGTATCATTGGA--TTCG 330517 Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| | ||||| || || || ||||||||||||| ||| |||||||| Sbjct 330516 ACTTCCAAAGTGATAGTCTTTCCAGTTAATGTTTTAACGAAAATTTGCAT 330467 >seq36 Length=416450 Score = 125 bits (138), Expect = 1e-23 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||| || ||||| || ||||||||||| || ||||| || ||||| Sbjct 87084 CCACCTCTGAGTCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATATTGTAGTCTGAG 87143 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| || ||||| || ||||| || ||||||||||| ||||| ||||| Sbjct 87144 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGGG 87203 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 87204 ATACCTTCCTTGTCTTG 87220 >seq27 Length=417575 Score = 125 bits (138), Expect = 1e-23 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| | ||||| || | || ||||| ||| || ||||| ||||| || Sbjct 23933 CCACCTCTTAATCTGAGGACCAAGTGAAGGGTTGATTCCTTTTGA-ATATTGTAATCAGA 23991 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||| | ||| || |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 23992 CAAGGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGAGG 24051 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATC--TGAACTTTCT 146227 ||| ||||| |||||||| || || || | ||| Sbjct 24052 AATACCTTCCTTATCTTGAATTTTGCTCTTAACGTTTTCAATGGTGTCATTGGA--TTCA 24109 Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTTA 146281 ||||| | || || |||||||| ||||||||||||| ||| |||||||||||| Sbjct 24110 ACTTCCAAGGTAATAGTTTTACCAGTTAATGTTTTAACGAAAATTTGCATTTTA 24163 Score = 116 bits (128), Expect = 6e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| |||||||| || | || ||||| || || || ||||| || Sbjct 23477 CCACCTCTCAATCTCAATACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGAC 23536 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| || |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 23537 AAGGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGAGGG 23596 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| |||||||| Sbjct 23597 ATTCCTTCCTTATCTTG 23613 Score = 107 bits (118), Expect = 3e-18 Identities = 108/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| || || | ||| | ||| ||||| ||| || || || ||||| || Sbjct 23705 CCACCTCTTAATCTCAAAACAAGATGGAGAGTTGATTCCTTTTGA-ATGTTGTAATCGGA 23763 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||| | ||| |||||||| || |||||||| || | |||||| ||||| ||||| Sbjct 23764 TAATGTTCTTCCATCTTCTAATTGCTTACCAGCAAAGATGAGTCTTTGTTGATCTGGAGG 23823 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||||| ||||| Sbjct 23824 GATTCCTTCTTTGTCTTG 23841 >seq54 Length=310422 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||||||||| || || || || | ||| ||||| || ||||| || || ||| Sbjct 138150 CCACCTCTAAGTCTCAAGACTAAGTGGAGAGTGGATTCCTTTTGGATATTGTAGTCAGAA 138209 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||||| ||| || ||||| || ||||| |||||||||||||| ||||| ||||| Sbjct 138210 AGGGTTCTGCCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGATCTGGAGGG 138269 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 138270 ATACCTTCCTTGTCTTG 138286 >seq37 Length=379849 Score = 120 bits (132), Expect = 5e-22 Identities = 109/135 (81%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAG-ATTCTTTAGATATATTATAATCTGA 146109 |||||||| | ||| ||||||||||| | ||| | || |||| || | ||| |||||||| Sbjct 314396 CCACCTCTCAATCTCAATACCAAATGGACAGTTGAATCCTTTTGA-AGATTGTAATCTGA 314454 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | |||||| | ||| || |||||||| |||||| ||||||| | ||| ||||||| || Sbjct 314455 GATAGTTCTACCATCTTCCAATTGTTTACCAGCATAAATCAAACGTTGTTGATCCGATGG 314514 Query 146170 AATTCCTTCTTTATC 146184 ||||||||| ||||| Sbjct 314515 AATTCCTTCCTTATC 314529 >seq81 Length=182562 Score = 116 bits (128), Expect = 6e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| | ||| || |||||||| | ||| || ||||| || || ||||| Sbjct 52164 TTCCTCCTCTTAATCTCAACACCAAATGAAGAGTTGAATCTTTTTGAATGTTGTAATCAT 52105 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||||| ||| || ||||||||||||||||| || | |||||| ||||| || | Sbjct 52104 TAATAGTTCTGCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCTTTGTTGATCTGGTG 52045 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||||| |||||||| Sbjct 52044 AAATTCCTTCCTTATCTTG 52026 >seq48 Length=342059 Score = 116 bits (128), Expect = 6e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| | ||| || |||||||| | ||| || ||||| || || ||||| Sbjct 177998 TTCCTCCTCTTAATCTCAACACCAAATGAAGAGTTGAATCTTTTTGAATGTTGTAATCAT 177939 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||||| ||| || ||||||||||||||||| || | |||||| ||||| || | Sbjct 177938 TAATAGTTCTGCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCTTTGTTGATCTGGTG 177879 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||||| |||||||| Sbjct 177878 AAATTCCTTCCTTATCTTG 177860 >seq28 Length=413107 Score = 116 bits (128), Expect = 6e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| | ||| || |||||||| | ||| || ||||| || || ||||| Sbjct 235061 TTCCTCCTCTTAATCTCAACACCAAATGAAGAGTTGAATCTTTTTGAATGTTGTAATCAT 235002 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||||| ||| || ||||||||||||||||| || | |||||| ||||| || | Sbjct 235001 TAATAGTTCTGCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCTTTGTTGATCTGGTG 234942 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||||| |||||||| Sbjct 234941 AAATTCCTTCCTTATCTTG 234923 Score = 114 bits (126), Expect = 2e-20 Identities = 111/140 (79%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCT 146107 |||| ||||| | ||| || |||||||| | ||| || || ||| || || || ||||| Sbjct 97631 TTCCTCCTCTTAATCTCAACACCAAATGAAGAGTTGAATCCTTTTGA-ATGTTGTAATCA 97573 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 || |||||||| ||| || ||||||||||||||||| || | |||||| ||||| || Sbjct 97572 TTAATAGTTCTGCCATCTTCCAATTGTTTTCCAGCAAAGATGAGTCTTTGTTGATCTGGT 97513 Query 146168 GGAATTCCTTCTTTATCTTG 146187 | ||||||||| |||||||| Sbjct 97512 GAAATTCCTTCCTTATCTTG 97493 >seq34 Length=395411 Score = 113 bits (124), Expect = 7e-20 Identities = 223/330 (68%), Gaps = 0/330 (0%) Strand=Plus/Minus Query 10365 GCATATGATTATATTGTTTCAGCACATGATAAAAAATTAATAAAAACTGATTTAATTATA 10424 || |||||||| |||||| |||| ||||||||| | | | || ||||| || || Sbjct 7479 GCCTATGATTACATTGTTCCAGCCCATGATAAATTACTTGTCAAGACTGACTTGGCCGTA 7420 Query 10425 GAAATTCCTAAAGGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAA 10484 | |||| | || | ||||| | | | || || | |||| ||||| | || || Sbjct 7419 GCTGTTCCACATGGTTATTATGGACGTGTTGCACCTCGTTCTGGATTAGCCTTGAAGAAT 7360 Query 10485 TTTATTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATA 10544 |||||||| | ||| || || || |||| ||||||||||||||| | || || | Sbjct 7359 TTTATTGACACTGGTGCAGGTGTTGTTGATTCTGATTATAGAGGAAATTTAGGTGTTGTT 7300 Query 10545 TTATTTAATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTA 10604 ||||| |||||| || ||||||||| | || || | || |||||| | ||||||| Sbjct 7299 TTATTCAATCATGGAAAGGAAGATTTTGTCATTAAACGTGGTGATAGAGTTGCTCAATTC 7240 Query 10605 ATATGTGAAAAAATTTTATATCCTAAAATGTTAAAAGTCGATAGTTTATCAGAAACAAAA 10664 || |||||| ||| || || |||| | | || ||| ||| || ||| Sbjct 7239 ATTATTGAAAAGATTGCATTACCACAAATTGTTGAGGTTGATGATTTGGATGATACATCG 7180 Query 10665 AGATCTGATTTTGGTTTTGGATCTACTGGT 10694 ||| || | ||| ||||| ||||||||| Sbjct 7179 AGAGGTGCTGGTGGATTTGGTTCTACTGGT 7150 >seq74 Length=222118 Score = 111 bits (122), Expect = 2e-19 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| | ||| ||||||||||| | || || ||||| || || ||||| Sbjct 7710 TTCCTCCTCTTAATCTCAATACCAAATGAAGTGTTGAATCTTTTTGAATGTTGTAATCAT 7651 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||||| ||| || |||||||| |||||||| || | |||||| ||||| || | Sbjct 7650 TAATAGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATGAGTCTTTGTTGATCTGGTG 7591 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||||| |||||||| Sbjct 7590 AAATTCCTTCCTTATCTTG 7572 Score = 102 bits (112), Expect = 1e-16 Identities = 105/135 (78%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || ||||| | ||| ||||| ||||| | ||| || || ||| || | ||| ||||| Sbjct 7936 CCTCCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGA-AGATTGTAATCATT 7878 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || |||||||| ||| ||||||||||| || ||| ||||||| | ||| ||||| | ||| Sbjct 7877 AATAGTTCTGCCATCTTCTAATTGTTTACCGGCATAAATCAAACGTTGTTGATCTGAAGG 7818 Query 146170 AATTCCTTCTTTATC 146184 ||| ||||| ||||| Sbjct 7817 AATACCTTCCTTATC 7803 >seq41 Length=362555 Score = 111 bits (122), Expect = 2e-19 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| | ||| || |||||||| | ||| || ||||| || || ||||| Sbjct 305182 TTCCTCCTCTTAATCTCAACACCAAATGAAGAGTTGAATCTTTTTGAATGTTGTAATCAT 305123 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||||| ||| || ||||||||||| ||||| || | |||||| ||||| || | Sbjct 305122 TAATAGTTCTGCCATCTTCCAATTGTTTTCCTGCAAAGATGAGTCTTTGTTGATCTGGTG 305063 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||||| |||||||| Sbjct 305062 AAATTCCTTCCTTATCTTG 305044 >seq18 Length=502116 Score = 111 bits (122), Expect = 2e-19 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| | ||| || |||||||| | ||| || ||||| || || ||||| Sbjct 87684 TTCCTCCTCTTAATCTCAACACCAAATGAAGAGTGGAGTCTTTTTGAATGTTGTAATCAT 87743 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||||| ||| ||||||||||| || ||||| || | |||||| ||||| || | Sbjct 87744 TAATAGTTCTGCCATCTTCTAATTGTTTACCTGCAAAGATGAGTCTTTGTTGATCTGGTG 87803 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||||| |||||||| Sbjct 87804 AAATTCCTTCCTTATCTTG 87822 >seq7 Length=693645 Score = 111 bits (122), Expect = 2e-19 Identities = 107/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || ||||| | ||| ||||| ||||||| ||| || || ||| || | ||| ||||| Sbjct 371264 CCTCCTCTCAATCTCAATACTAAATGTACAGTTGAATCCTTTTGA-AGATTGTAATCACT 371206 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || ||||||| ||| |||||||||||||| ||| ||||||||| ||| ||||| | ||| Sbjct 371205 AATTGTTCTGCCATCTTCTAATTGTTTTCCTGCATAAATCAATCGTTGTTGATCTGAAGG 371146 Query 146170 AATTCCTTCTTTATC 146184 ||| ||||| ||||| Sbjct 371145 AATACCTTCCTTATC 371131 Score = 107 bits (118), Expect = 3e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| | ||| ||||||||||| | || || ||||| || |||||||| Sbjct 371038 TTCCTCCTCTCAATCTCAATACCAAATGAAGTGTGGAGTCTTTTTGAATGTTATAATCAT 370979 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||||| ||| || |||||||| || ||| | || | |||||| || || || | Sbjct 370978 TAATAGTTCTGCCATCTTCCAATTGTTTACCTGCATAGATGAGTCTTTGTTGTTCTGGTG 370919 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||||||||| |||||||| Sbjct 370918 GAATTCCTTCCTTATCTTG 370900 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| | ||| ||||||||||| | || || ||||| || |||||||| Sbjct 333652 TTCCTCCTCGCAATCTCAATACCAAATGAAGTGTGGAGTCTTTTTGAATGTTATAATCAT 333593 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||||| ||| || |||||||| || ||| | || | |||||| || || || | Sbjct 333592 TAATAGTTCTGCCATCTTCCAATTGTTTACCGGCATAGATGAGTCTTTGTTGTTCTGGTG 333533 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||||||||| |||||||| Sbjct 333532 GAATTCCTTCCTTATCTTG 333514 Score = 96.9 bits (106), Expect = 5e-15 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || ||||| | ||| ||||| ||||| | ||| || || ||| || | ||| ||||| Sbjct 333878 CCTCCTCTTAATCTCAATACTAAATGCACAGTTGAATCCTTTTGA-AGATTGTAATCACT 333820 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || |||||| | ||| || ||||||||||| ||| ||||||||| ||| ||||| | ||| Sbjct 333819 AATAGTTCTTCCATCTTCCAATTGTTTTCCTGCATAAATCAATCGTTGTTGATCTGAAGG 333760 Query 146170 AATTCCTTCTTTATC 146184 || ||||| ||||| Sbjct 333759 GATACCTTCCTTATC 333745 Score = 93.3 bits (102), Expect = 6e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || ||||| | ||| ||||| ||||| | ||| || || ||| || | ||| ||||| Sbjct 579057 CCTCCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGA-AGATTGTAATCACC 579115 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || ||||| | ||| || ||||| || || ||| ||||||||| ||| ||||| | ||| Sbjct 579116 AATGGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGTTGATCTGAAGG 579175 Query 146170 AATTCCTTCTTTATC 146184 ||||||||| ||||| Sbjct 579176 AATTCCTTCCTTATC 579190 >seq87 Length=138333 Score = 107 bits (118), Expect = 3e-18 Identities = 108/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| ||||| ||||| | ||| || || ||| || | ||| ||||| Sbjct 126375 CCACCTCTCAATCTCAATACTAAATGAAGAGTTGAATCCTTTTGA-AGATTGTAATCACC 126317 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || |||||| | ||| || |||||||||||| |||| || | |||||| ||||| || | Sbjct 126316 AATAGTTCTTCCATCTTCCAATTGTTTTCCACCAAAGATGAGTCTTTGTTGATCTGGTGA 126257 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| |||||||| Sbjct 126256 AATTCCTTCCTTATCTTG 126239 >seq84 Length=160583 Score = 107 bits (118), Expect = 3e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| | ||| ||||||||||| | || || ||||| || ||||||| Sbjct 128964 TTCCTCCTCTCAATCTCAATACCAAATGAAGTGTTGAATCTTTTTGAATGCTATAATCAT 129023 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||| | ||| ||||||||||| || ||||| || | |||||| ||||| | | Sbjct 129024 TAATAGTTCTTCCATCTTCTAATTGTTTACCTGCAAAGATGAGTCTTTGTTGATCGGATG 129083 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||||||||| |||||||| Sbjct 129084 GAATTCCTTCCTTATCTTG 129102 Score = 93.3 bits (102), Expect = 6e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || ||||| ||||| || || ||||| | ||| || || ||| || | ||| ||||| Sbjct 128738 CCTCCTCTCAGTCTCAACACTAAATGCACAGTTGAATCCTTTTGA-AGATTGTAATCACT 128796 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || ||||| | ||| || ||||||||||| ||| ||||||||| ||| ||||| | || Sbjct 128797 AACTGTTCTTCCATCTTCCAATTGTTTTCCTGCATAAATCAATCGTTGTTGATCTGATGG 128856 Query 146170 AATTCCTTCTTTATC 146184 |||||| || ||||| Sbjct 128857 AATTCCCTCCTTATC 128871 >seq14 Length=782252 Score = 105 bits (116), Expect = 1e-17 Identities = 106/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || ||||| | ||| ||||| ||||| | ||| || || ||| || | ||| ||||| Sbjct 722733 CCTCCTCTCAATCTCAATACTAAATGCACAGTTGAGTCCTTTTGA-AGATTGTAATCATT 722791 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || ||||||| ||| || ||||||||||| ||| ||||||||| ||| ||||| | ||| Sbjct 722792 AATGGTTCTGCCATCTTCCAATTGTTTTCCTGCATAAATCAATCGTTGTTGATCTGAAGG 722851 Query 146170 AATTCCTTCTTTATC 146184 ||| ||||||||||| Sbjct 722852 AATACCTTCTTTATC 722866 >seq30 Length=401612 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| ||||| | ||| || |||||||| | ||| || ||||| || || ||||| Sbjct 53402 TTCCTCCTCTTAATCTCAACACCAAATGAAGAGTTGAATCTTTTTGAATGTTGTAATCAT 53343 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 || |||||| | ||| || |||||||||||| |||| || | |||||| ||||| || | Sbjct 53342 TAATAGTTCTTCCATCTTCCAATTGTTTTCCACCAAAGATGAGTCTTTGTTGATCTGGTG 53283 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||||| || ||||| Sbjct 53282 AAATTCCTTCCTTTTCTTG 53264 Score = 102 bits (112), Expect = 1e-16 Identities = 105/135 (78%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || ||||| | ||| || |||||||| | |||||| || ||| || | || ||||| Sbjct 53628 CCTCCTCTCAATCTCAACACCAAATGCACAGTAGAATCCTTTTGA-AGGTTGTAATCACT 53570 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || ||||| | ||| |||||||||||||| ||| ||||||||| ||| ||||| | ||| Sbjct 53569 AATTGTTCTTCCATCTTCTAATTGTTTTCCTGCATAAATCAATCGTTGTTGATCTGAAGG 53510 Query 146170 AATTCCTTCTTTATC 146184 ||| ||||| ||||| Sbjct 53509 AATGCCTTCCTTATC 53495 >seq60 Length=297120 Score = 89.7 bits (98), Expect = 8e-13 Identities = 100/132 (76%), Gaps = 4/132 (3%) Strand=Plus/Plus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGA--TTCTTTAGATATATTATAATCT 146107 ||| ||||| | ||| ||||||||||| ||||| | | | || | || || |||||| Sbjct 84791 TCCTCCTCTCAATCTCAATACCAAATG--AAGTACACCTCCATTTGTAATGTTGTAATCT 84848 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | ||||| | ||| || |||||||| ||||| |||||||||| ||| ||||| ||| Sbjct 84849 TTCAATGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATCAATCGTTGTTGATCTGGA 84908 Query 146168 GGAATTCCTTCT 146179 ||| |||| ||| Sbjct 84909 GGAGTTCCATCT 84920 >seq188 Length=9800 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || ||||| | ||| || || ||||| | || || || ||| || | ||| ||||| || Sbjct 9535 CCTCCTCTCAATCTCAAAACTAAATGAACTGTTGAATCCTTTTGA-AGATTGTAATCGGA 9477 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || ||| | ||| ||||||||||| || ||| ||||||||||||| ||||| | || Sbjct 9476 GAGTTGTCTTCCATCTTCTAATTGTTTACCTGCATAAATCAATCTTTGTTGATCAGATGG 9417 Query 146170 AATTCCTTCTTTATC 146184 ||| ||||| ||||| Sbjct 9416 AATACCTTCCTTATC 9402 >seq16 Length=536960 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || ||||| | ||| || || ||||| | || || || ||| || | ||| ||||| || Sbjct 394212 CCTCCTCTCAATCTCAAAACTAAATGAACTGTTGAATCCTTTTGA-AGATTGTAATCGGA 394270 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || ||| | ||| ||||||||||| || ||| ||||||||||||| ||||| | || Sbjct 394271 GAGTTGTCTTCCATCTTCTAATTGTTTACCTGCATAAATCAATCTTTGTTGATCAGATGG 394330 Query 146170 AATTCCTTCTTTATC 146184 ||| ||||| ||||| Sbjct 394331 AATACCTTCCTTATC 394345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743519113441280