Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20gruberi_20[genbank_20GCA_5F000004985.1_202010-01-20] 784 sequences; 40,964,085 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq38 116 4e-21 seq52 113 4e-20 seq27 109 5e-19 seq10 109 5e-19 seq74 104 2e-17 seq79 102 8e-17 seq188 89.7 5e-13 seq16 89.7 5e-13 seq7 89.7 5e-13 >seq38 Length=381539 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| || ||||| | ||||| || |||||||||||||||||| | Sbjct 330693 CCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGAATGTTATAATCGGAC 330634 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | |||||||||||| | |||| |||||| ||||| || || Sbjct 330633 AAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGG 330574 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| | || | || | | ||| | ||| || ||| || || Sbjct 330573 ATTCCTTCTTTGTC-TTGAATCTTACTCTTGACATTTTCAATTGTATCATTGGATTCGAC 330515 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||| || || || ||||| ||||| |||||||| Sbjct 330514 TTCCAAAGTGATAGTCTTTCCAGTTAATGTTTTAACGAAAATTTGCAT 330467 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||||||||| |||| || || |||||||| || || ||||| | Sbjct 331149 CCACCTCTCAATCTCAAAACTAAATGAAGAGTTGATTCTTTTTGGATATTGTAATCAGAC 331090 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || |||||| || |||||||||||| | || || | ||| ||||| || || Sbjct 331089 AATGTTCTTCCGTCTTCTAGTTGTTTACCAGCAAATATAAGTCTTTGTTGATCTGGTGGG 331030 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | |||| || | | ||| | ||| || ||| || || Sbjct 331029 ATACCTTCCTTATC-TTGAATCTTTGACTTGACATTTTCAATTGTATCATTGGATTCAAC 330971 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || || || || || ||||| ||||| ||||||||| Sbjct 330970 TTCCAATGTAATGGTTTTACCAGTTAATGTTTTAACGAAAATTTGCATA 330922 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||||||||| || | || || || |||||||||||||||||| Sbjct 330921 CCACCTCTCAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTGAATGTTATAATCGGAT 330862 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || ||||| | || ||||||||| | || || | ||| ||||| || || Sbjct 330861 AATGTTCTACCATCTTCCAATTGCTTACCAGCAAATATAAGTCTTTGTTGATCTGGTGGA 330802 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | || | ||| | | ||| | |||||| | | || || Sbjct 330801 ATACCTTCCTTATC-TTGAATCTTGCTCTTAACATTTTCGATGGTGTCGTTTGATTCAAC 330743 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || ||||| || || || || ||||||||| Sbjct 330742 TTCTAAAGTGATAGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCATA 330694 >seq52 Length=331721 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | ||||||||| || | || || |||||||||||||||||||| Sbjct 165305 CCACCTCTTAATCTCAAAACTAAATGCAAAGTTGATTCTTTTTGAATGTTATAATCAGAT 165364 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || ||||| | |||||||||||| |||| || | ||| ||||| || || Sbjct 165365 AATGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATAAGTCTTTGTTGATCTGGTGGA 165424 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| |||| | || | | ||| | ||||| | | || || Sbjct 165425 ATACCTTCCTTGTC-TTGAATTTTAGACTTGACATTTTCAATAGTGTCATTTGATTCAAC 165483 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || ||||| ||||| || || ||||||||| Sbjct 165484 TTCCAAAGTGATAGTCTTACCAGTCAAAGTTTTGACAAAGATTTGCATA 165532 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | |||||| | |||| || || || |||||||| |||||||| Sbjct 165077 CCACCTCTTAATCTCAAAACAAGATGAAGAGTTGATTCCTTTTGAATATTATAATCAGAT 165136 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || ||||| | |||||||||||| | |||| | ||| ||||| || || Sbjct 165137 AATGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 165196 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | |||| |||| | | ||| | ||| || ||| ||| || Sbjct 165197 ATACCTTCCTTATC-TTGAATCTTTGATTTAACATTTTCAATTGTATCATTGGACTCGAC 165255 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || || || ||||| ||||| ||||||||| Sbjct 165256 TTCCAATGTAATTGTCTTTCCTGTTAAAGTTTTGACGAAAATTTGCATA 165304 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||| || || | || || || |||||||||||||| || Sbjct 185466 CCACCTCTCAATCTCAAAACCAAATGCAAAGTTGATTCCTTTTGAATGTTATAGTCTGAG 185407 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | |||||||||||| |||| || | ||| ||||| || || Sbjct 185406 AGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATGAGTCTTTGTTGATCTGGTGGG 185347 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | |||| ||| | | ||| | |||||| | | || || Sbjct 185346 ATACCTTCCTTGTC-TTGAATCTTTGATTTGACATTTTCAATAGTGTCGTTTGATTCAAC 185288 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||| || || || ||||| ||||| |||||||| Sbjct 185287 TTCCAATGTAATTGTCTTACCAGTTAATGTTTTAACGAAAATTTGCAT 185240 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 ||||| || || | || || || |||||||| ||||| || | || || ||| Sbjct 185907 AAAACCAAATGCAAAGTTGATTCCTTTTGAATATTATAGTCTGAGAGAGTTCTTCCATCT 185848 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || | |||||||||||| |||| || | ||| ||||| || || || ||||| || || Sbjct 185847 TCCAATTGTTTACCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATACCTTCCTTATC- 185789 Query 139673 GTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731 ||| | |||| |||| | | ||| | ||| || ||| ||| || || | || | || Sbjct 185788 TTGAATCTTTGATTTAACATTTTCAATTGTATCATTGGACTCGACTTCCAATGTAATTGT 185729 Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| || || || ||||| ||||| ||||||||| Sbjct 185728 CTTTCCTGTTAAAGTTTTGACGAAAATTTGCATA 185695 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 || |||| ||| | |||||| ||||| | || || || |||||||| || ||||| | | Sbjct 185694 CCACCTCTTAATCTCAAAACCAAGTGCAAAGTTGATTCCTTTTGAATATTGTAATCAGAT 185635 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || || ||||| | |||||||||||| | || || | ||| ||||| || || Sbjct 185634 AAGAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGG 185575 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| || || ||| |||| | || | | ||| | ||| || ||| || | Sbjct 185574 GATACCTTCCTTATC-TTGAATTTTAGACTTGACATTTTCAATTGTATCATTGGATTCAA 185516 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | || | || || || || || ||||| ||||| ||||||||| Sbjct 185515 CTTCCAATGTGATTGT-TTTCCTGTTAAAGTTTTGACGAAAATTTGCATA 185467 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| || || || |||||||| |||||||| | ||| || ||||| Sbjct 165551 ACCAAGTGAAGGGTTGATTCCTTTTGAATATTATAATCAGATAATGTTCTTCCATCTTCT 165610 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 | |||||||||||| | || | |||||| ||||| || || || ||||| || || || Sbjct 165611 AATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATC-TTG 165669 Query 139676 ATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 | | || | || | | ||| | || || ||| || || || | || | ||||| Sbjct 165670 AATCTTAGACTTGACATTTTCAATAGTATCATTGGATTCGACTTCCAAAGTGATAGTCTT 165729 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || || ||||| ||||| |||||||| Sbjct 165730 TCCAGTTAATGTTTTAACGAAAATTTGCAT 165759 >seq27 Length=417575 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | |||||| | || | || || || ||||||||||| |||||| Sbjct 23705 CCACCTCTTAATCTCAAAACAAGATGGAGAGTTGATTCCTTTTGAATGTTGTAATCGGAT 23764 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || ||||| | || ||||||||| |||| || | ||| ||||| ||||| Sbjct 23765 AATGTTCTTCCATCTTCTAATTGCTTACCAGCAAAGATGAGTCTTTGTTGATCTGGAGGG 23824 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| | |||| || | | ||| | |||||| | | || || Sbjct 23825 ATTCCTTCTTTGTC-TTGAATCTTTGACTTGACATTTTCAATGGTGTCGTTTGATTCAAC 23883 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || ||||| || || ||||| ||||||||| Sbjct 23884 TTCTAAAGTGATAGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCATA 23932 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| || ||||| | || || || ||||||||||| ||||| Sbjct 23249 CCACCTCTCAATCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGAA 23308 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | || ||||||||| |||| || | ||| ||||| || || Sbjct 23309 AGGGTTCTTCCATCTTCTAATTGCTTACCAGCAAAGATGAGTCTTTGTTGATCTGGTGGA 23368 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | |||| || | | ||| | || || | | || || Sbjct 23369 ATACCTTCCTTGTC-TTGAATCTTTGACTTGACATTTTCAATAGTATCATTAGATTCGAC 23427 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| ||| | ||||| || ||||| ||||| ||||| ||||||||| Sbjct 23428 TTCAAGGGTAATTGTCTTACCAGTCAAAGTTTTGACGAAGATTTGCATA 23476 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| || ||||| | || || || ||||| ||||| ||||| | Sbjct 23477 CCACCTCTCAATCTCAATACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGAC 23536 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | ||||||||||| | |||| | ||| ||||| ||||| Sbjct 23537 AAGGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGAGGG 23596 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| || || ||| || || | | ||| | |||||| ||| ||| || Sbjct 23597 ATTCCTTCCTTATCTTGGATCTTAGACTTAACATTTTCAATTGTGTCATTGGACTCGACT 23656 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || || || ||||| ||||| ||||||||| Sbjct 23657 TCCAATGTAATGGTCTTTCCTGTTAAAGTTTTAACGAAAATTTGCATA 23704 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | | || ||||||| || || || |||||||| || ||||| | Sbjct 23933 CCACCTCTTAATCTGAGGACCAAGTGAAGGGTTGATTCCTTTTGAATATTGTAATCAGAC 23992 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | ||||||||||| | |||| | ||| ||||| ||||| Sbjct 23993 AAGGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGAGGA 24052 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| |||| | ||| | | ||| | ||||| ||| || || Sbjct 24053 ATACCTTCCTTATC-TTGAATTTTGCTCTTAACGTTTTCAATGGTGTCATTGGATTCAAC 24111 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | || || || || || ||||| ||||| |||||||| Sbjct 24112 TTCCAAGGTAATAGTTTTACCAGTTAATGTTTTAACGAAAATTTGCAT 24159 >seq10 Length=665159 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | |||||| | |||| || || || |||||||| ||||||||| Sbjct 187945 CCACCTCTTAATCTCAAAACAAGATGAAGAGTTGATTCCTTTTGAATATTATAATCGGAT 188004 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || ||||| | ||||||||||| | |||| |||||| ||||| ||||| Sbjct 188005 AATGTTCTTCCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGG 188064 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | |||| ||| | | ||| | || || ||| || || Sbjct 188065 ATACCTTCCTTATC-TTGAATCTTTGATTTGACATTTTCAATAGTATCATTGGATTCAAC 188123 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || || || ||||| ||||| ||||||||| Sbjct 188124 TTCCAATGTAATTGTCTTTCCTGTTAATGTTTTGACGAAAATTTGCATA 188172 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||||||||| | ||||| || |||||||| || ||||| Sbjct 188173 CCACCTCTCAATCTCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTGTAATCAGAT 188232 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | |||||||||||| | |||| | ||| ||||| || || Sbjct 188233 AAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 188292 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| |||| | || | | ||| | || || | | || || Sbjct 188293 ATTCCTTCTTTGTC-TTGAATTTTAGACTTGACATTTTCAATAGTATCATTTGATTCAAC 188351 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | || || || || | ||||| ||||| ||||||||| Sbjct 188352 TTCAAGAGTGATAGTTTTACCAGTGAGTGTTTTAACGAAAATTTGCATA 188400 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | ||||| || || | || || || |||||||||||||| || Sbjct 188401 CCACCTCTTAATCTTAAAACCAAATGCAAAGTTGATTCCTTTTGAATGTTATAGTCAGAG 188460 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | || ||||||||| |||| || | ||| ||||| ||||| Sbjct 188461 AGAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATAAGTCTTTGTTGATCTGGAGGG 188520 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||| ||| || | | ||| | |||||| | | || || Sbjct 188521 ATTCCTTCCTTGTCTTGGATCTTTGACTTAACATTTTCAATAGTGTCGTTTGATTCAACT 188580 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || ||||| || || || || ||||||||| Sbjct 188581 TCTAAAGTGATAGTCTTACCAGTCAAAGTCTTGACAAAGATTTGCATA 188628 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| || || || |||||||| ||||| || | || || ||||| Sbjct 188647 ACCAAGTGAAGGGTTGATTCCTTTTGAATATTATAGTCAGAAAGGGTTCTTCCATCTTCC 188706 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 | ||||||||||| | |||| |||||| ||||| ||||| || ||||| || || || Sbjct 188707 AATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATC-TTG 188765 Query 139676 ATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 | | || | ||| | | ||| | || ||| ||| || || || | || | ||||| Sbjct 188766 AATCTTGCTCTTAACATTTTCAATAGTATCGTTGGATTCAACTTCTAAAGTGATAGTCTT 188825 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || || ||||| ||||| |||||||| Sbjct 188826 TCCTGTTAATGTTTTAACGAAAATTTGCAT 188855 >seq74 Length=222118 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| ||||| || | || || || ||||||| || ||||| | Sbjct 7936 CCTCCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCATTA 7877 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 || || || ||||| | |||||||| ||||| |||| |||||| ||||| | ||| Sbjct 7876 ATAGTTCTGCCATCTTCTAATTGTTTACCGGCATAAATCAAACGTTGTTGATCTGAAGGA 7817 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| || || || |||||||| | | || || |||||| | | |||| Sbjct 7816 ATACCTTCCTTATCAAATATCTTTTGTTTCATATTCTCAACAGTGTCGTTTGATTCCATT 7757 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||| || || || ||||||||||| | |||||| Sbjct 7756 TCGATAGTAATGGTCTTTCCAGTTAAGGTTTTTACGAAGAGTTGCAT 7710 >seq79 Length=326815 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||| || || | ||||| || |||||||||||||| || Sbjct 172956 CCACCTCTCAATCTCAAAACCAAATGCAAAGTAGATTCCTTTTGAATGTTATAGTCTGAG 173015 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | || ||||||||| |||||| | ||| ||||| ||||| Sbjct 173016 AGGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGG 173075 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | || | ||| | | ||| | |||||| | | || || Sbjct 173076 ATACCTTCCTTATC-TTGAATCTTGCTCTTAACATTTTCAATGGTGTCGTTTGATTCAAC 173134 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | || || |||||||| ||||| ||||| |||||||| Sbjct 173135 TTCCAAGGTAATAGTTTTACCGGTCAAAGTTTTAACGAAGATTTGCAT 173182 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| || ||||||| || || || |||||||||||||| || Sbjct 172272 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTTGATTCCTTTTGAATGTTATAGTCAGAA 172331 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | || ||||||||| |||| || | ||| ||||| || || Sbjct 172332 AGGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATAAGTCTTTGTTGATCTGGTGGA 172391 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | || | ||| | | ||| | || || | | || || Sbjct 172392 ATACCTTCCTTATC-TTGAATCTTGCTCTTAACATTTTCAATAGTATCATTAGATTCGAC 172450 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| ||| | ||||| || || | || || ||||| ||||||||| Sbjct 172451 TTCAAGGGTAATTGTCTTACCAGTGAGAGTCTTGACGAAGATTTGCATA 172499 >seq188 Length=9800 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/151 (74%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| || ||||||| ||||| ||||||||||| || ||||| | Sbjct 9307 CCACCTCTCAATCTCAATACCAAGTGAAGAGTAGAGTCTTTTTGAATATTGTAATCATTG 9248 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 || || || ||||| | ||||||||||||||||| || | ||| || || || || Sbjct 9247 ATCGTTCTGCCATCTTCCAATTGTTTACCAGCATAGATGAGTCTTTGTTGTTCTGGTGGA 9188 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTA 139688 || ||||| || || ||| |||| ||||| Sbjct 9187 ATACCTTCCTTATC-TTGAACTTTTCTTTTA 9158 >seq16 Length=536960 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/151 (74%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| || ||||||| ||||| ||||||||||| || ||||| | Sbjct 394440 CCACCTCTCAATCTCAATACCAAGTGAAGAGTAGAGTCTTTTTGAATATTGTAATCATTG 394499 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 || || || ||||| | ||||||||||||||||| || | ||| || || || || Sbjct 394500 ATCGTTCTGCCATCTTCCAATTGTTTACCAGCATAGATGAGTCTTTGTTGTTCTGGTGGA 394559 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTA 139688 || ||||| || || ||| |||| ||||| Sbjct 394560 ATACCTTCCTTATC-TTGAACTTTTCTTTTA 394589 >seq7 Length=693645 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| || | ||| || || |||| || || |||||||||||||||||||| | Sbjct 333650 CCTCCTCGCAATCTCAATACCAAATGAAGTGTGGAGTCTTTTTGAATGTTATAATCATTA 333591 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 || || || ||||| | |||||||| |||||||| || | ||| || || || || Sbjct 333590 ATAGTTCTGCCATCTTCCAATTGTTTACCGGCATAGATGAGTCTTTGTTGTTCTGGTGGA 333531 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| ||| ||||| | | ||| | || || | | || || Sbjct 333530 ATTCCTTCCTTATC-TTGAACCTTTCTTTTAACATTTTCAATTGAATCATTAGATTCAAC 333472 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || || || | || || ||||||| |||||| Sbjct 333471 TTCCAATGTGATGGTTTTACCAGTGAGTGTCTTGACGAATAATTGCAT 333424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496059138572800