Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20gruberi_20[genbank_20GCA_5F000004985.1_202010-01-20] 784 sequences; 40,964,085 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq38 118 7e-22 seq10 105 4e-18 seq79 104 1e-17 seq52 102 5e-17 seq27 100 2e-16 seq36 96.9 2e-15 seq30 95.1 8e-15 >seq38 Length=381539 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||||||||| ||||| || || || ||||| || || ||||| || Sbjct 330694 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGAATGTTATAATCGGA 330635 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || |||||||| || ||| ||| || |||||||| || || | || Sbjct 330634 CAAGGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGG 330575 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || |||| || || ||| ||| || || |||| || || Sbjct 330574 GATTCCTTCTTTGTCTTGAATCTTACTCTTGACATTTTCAATTGTATCATTGGATTCGAC 330515 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| ||| || || ||||| || | ||||| |||||||||||||| Sbjct 330514 TTCCAAAGTGATAGTCTTTCCAGTTAATGTTTTAACGAAAATTTGCAT 330467 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| || ||||| | || || |||||||| |||||||||||||| Sbjct 331150 ACCACCTCTCAATCTCAAAACTAAATGAAGAGTTGATTCTTTTTGGATATTGTAATCAGA 331091 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | ||| || | ||| || ||| |||||| | | ||| || || | || Sbjct 331090 CAATGTTCTTCCGTCTTCTAGTTGTTTACCAGCAAATATAAGTCTTTGTTGATCTGGTGG 331031 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| || || ||| ||| || || |||| || ||| Sbjct 331030 GATACCTTCCTTATCTTGAATCTTTGACTTGACATTTTCAATTGTATCATTGGATTCAAC 330971 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| || || ||||| || || | ||||| |||||||||||||| Sbjct 330970 TTCCAATGTAATGGTTTTACCAGTTAATGTTTTAACGAAAATTTGCAT 330923 >seq10 Length=665159 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| || || ||||| || || || ||||| |||||||||||||| Sbjct 188172 ACCACCTCTCAATCTCAAAACTAAGTGCAAAGTAGATTCCTTTTGAATATTGTAATCAGA 188231 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || | | || || ||||| || ||| ||| || || | ||| || || | || Sbjct 188232 TAAGGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 188291 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || ||| || || ||| ||| || || || | || ||| Sbjct 188292 AATTCCTTCTTTGTCTTGAATTTTAGACTTGACATTTTCAATAGTATCATTTGATTCAAC 188351 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || ||||| || || || ||||| |||||||||||||| Sbjct 188352 TTCAAGAGTGATAGTTTTACCAGTGAGTGTTTTAACGAAAATTTGCAT 188399 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | ||| || | ||| | || || || ||||| ||||| ||||| || Sbjct 187944 ACCACCTCTTAATCTCAAAACAAGATGAAGAGTTGATTCCTTTTGAATATTATAATCGGA 188003 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || | | || || ||||| || ||| || || |||||||| || || | || Sbjct 188004 TAATGTTCTTCCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGG 188063 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| ||| || ||| ||| || || |||| || ||| Sbjct 188064 GATACCTTCCTTATCTTGAATCTTTGATTTGACATTTTCAATAGTATCATTGGATTCAAC 188123 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| || || || ||||| || | ||||| |||||||||||||| Sbjct 188124 TTCCAATGTAATTGTCTTTCCTGTTAATGTTTTGACGAAAATTTGCAT 188171 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | | ||||| || | || || || ||||| ||||| || ||||| Sbjct 188628 ACCACCTCTCAATCTGAGGACCAAGTGAAGGGTTGATTCCTTTTGAATATTATAGTCAGA 188687 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | || |||||||| || ||| || || |||||||| || || | || Sbjct 188688 AAGGGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGG 188747 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| || || ||| ||| || ||||||| || ||| Sbjct 188748 AATACCTTCCTTATCTTGAATCTTGCTCTTAACATTTTCAATAGTATCGTTGGATTCAAC 188807 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | ||| || || ||||| || | ||||| |||||||||||||| Sbjct 188808 TTCTAAAGTGATAGTCTTTCCTGTTAATGTTTTAACGAAAATTTGCAT 188855 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/232 (68%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | || ||||||||||| || || || ||||| || || || ||||| Sbjct 188400 ACCACCTCTTAATCTTAAAACCAAATGCAAAGTTGATTCCTTTTGAATGTTATAGTCAGA 188459 Query 33202 CAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257 | ||||| || ||||||||||| ||| ||| || | | ||| || || | Sbjct 188460 GA----GAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATAAGTCTTTGTTGATCTG 188515 Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317 || || ||||| || || ||| || || ||| ||| |||||||| | || Sbjct 188516 GAGGGATTCCTTCCTTGTCTTGGATCTTTGACTTAACATTTTCAATAGTGTCGTTTGATT 188575 Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || | ||| || || || || || | ||| || || || |||||||| Sbjct 188576 CAACTTCTAAAGTGATAGTCTTACCAGTCAAAGTCTTGACAAAGATTTGCAT 188627 >seq79 Length=326815 Score = 104 bits (114), Expect = 1e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| | | ||| ||||| || | || || || ||||| |||||||||||||| Sbjct 172727 ACCACCTCTAAGTCTCAAAACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAATCAGA 172786 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCA-CTAAATATTAAACGTTGCTGGTCCGTGG 33260 |||| | || ||||||||||| ||| | ||| || || | ||| || || | | Sbjct 172787 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAAGATCAATCTTTGTTGATCTGGAG 172846 Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320 | || ||||| || || |||| || || ||| ||| |||||||| | || || Sbjct 172847 GGATACCTTCCTTATCTTGAATCTTTGACTTGACATTTTCAATGGTGTCGTTTGATTCAA 172906 Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 | |||||||| || || || || || | ||| || || ||||||||||| Sbjct 172907 CTTCCAGAGTGATTGTCTTACCAGTCAAAGTCTTGAC-AAAATTTGCAT 172954 Score = 102 bits (112), Expect = 5e-17 Identities = 165/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| ||||||||||| || || || ||||| || || || || || Sbjct 172955 ACCACCTCTCAATCTCAAAACCAAATGCAAAGTAGATTCCTTTTGAATGTTATAGTCTGA 173014 Query 33202 CAAATTGAGTTGG----TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257 | | ||| || ||||||||||| ||| ||| || || | ||| || || | Sbjct 173015 GA----GGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCTG 173070 Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317 || || ||||| || || |||| || || ||| ||| |||||||| | || Sbjct 173071 GAGGGATACCTTCCTTATCTTGAATCTTGCTCTTAACATTTTCAATGGTGTCGTTTGATT 173130 Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTA 33374 ||| |||| || || ||||| || || | |||||| ||||| |||||||| |||| Sbjct 173131 CAACTTCCAAGGTAATAGTTTTACCGGTCAAAGTTTTAACGAAGATTTGCATCTTTA 173187 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| | | ||| ||||| || | || || || ||||| |||||||||||||| Sbjct 172499 ACCACCTCTAAGTCTCAAAACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAATCAGA 172558 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 |||| | || ||||||||||| ||| ||| || | | ||| || || | || Sbjct 172559 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATAAGTCTTTGTTGATCTGGTGG 172618 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| || || ||| ||| || || || | || || Sbjct 172619 AATACCTTCCTTATCTTGAATCTTGCTCTTAACATTTTCAATAGTATCATTAGATTCGAC 172678 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || || || ||||| || ||||| |||||||| Sbjct 172679 TTCAAGGGTAATTGTCTTACCAGTGAGAGTCTTGACGAAGATTTGCAT 172726 >seq52 Length=331721 Score = 102 bits (112), Expect = 5e-17 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | ||| ||||| ||||| || || || ||||| |||||||||||||| Sbjct 185695 ACCACCTCTTAATCTCAAAACCAAGTGCAAAGTTGATTCCTTTTGAATATTGTAATCAGA 185636 Query 33202 CAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257 || ||||| || || ||||| || ||| ||| || | | ||| || || | Sbjct 185635 TAA---GAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTG 185579 Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317 || || ||||| || || ||| || || ||| ||| || || |||| || Sbjct 185578 GTGGGATACCTTCCTTATCTTGAATTTTAGACTTGACATTTTCAATTGTATCATTGGATT 185519 Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| |||| || || | |||||| || | |||||| |||||||||||||| Sbjct 185518 CAACTTCCAATGTGATTG-TTTTCCTGTTAAAGTTTTGACGAAAATTTGCAT 185468 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | | ||||| || | || || || ||||| ||||| |||||||| Sbjct 165532 ACCACCTCTCAATCTGAGGACCAAGTGAAGGGTTGATTCCTTTTGAATATTATAATCAGA 165591 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || | | || || ||||| || ||| ||| ||||||||||| || || | || Sbjct 165592 TAATGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATTAAACGTTGTTGATCTGGTGG 165651 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| || || ||| ||| || || |||| || || Sbjct 165652 GATTCCTTCCTTATCTTGAATCTTAGACTTGACATTTTCAATAGTATCATTGGATTCGAC 165711 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| ||| || || ||||| || | ||||| |||||||||||||| Sbjct 165712 TTCCAAAGTGATAGTCTTTCCAGTTAATGTTTTAACGAAAATTTGCAT 165759 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| ||||||||||| || || || ||||| || || || || || Sbjct 185467 ACCACCTCTCAATCTCAAAACCAAATGCAAAGTTGATTCCTTTTGAATGTTATAGTCTGA 185408 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | || |||||||| || ||| ||| || | | ||| || || | || Sbjct 185407 GAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATGAGTCTTTGTTGATCTGGTGG 185348 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| ||| || ||| ||| |||||||| | || ||| Sbjct 185347 GATACCTTCCTTGTCTTGAATCTTTGATTTGACATTTTCAATAGTGTCGTTTGATTCAAC 185288 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| || || || || || || | ||||| |||||||||||||| Sbjct 185287 TTCCAATGTAATTGTCTTACCAGTTAATGTTTTAACGAAAATTTGCAT 185240 Score = 91.5 bits (100), Expect = 9e-14 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | ||| || | ||| | || || || ||||| ||||| |||||||| Sbjct 165076 ACCACCTCTTAATCTCAAAACAAGATGAAGAGTTGATTCCTTTTGAATATTATAATCAGA 165135 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || | | || || ||||| || ||| ||| || || | ||| || || | || Sbjct 165136 TAATGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 165195 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| ||| || ||| ||| || || |||| | || Sbjct 165196 AATACCTTCCTTATCTTGAATCTTTGATTTAACATTTTCAATTGTATCATTGGACTCGAC 165255 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| || || || ||||| || | |||||| |||||||||||||| Sbjct 165256 TTCCAATGTAATTGTCTTTCCTGTTAAAGTTTTGACGAAAATTTGCAT 165303 Score = 91.5 bits (100), Expect = 9e-14 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | || ||||||||||| || || || ||||| ||||| || || || Sbjct 185923 ACCACCTCTCAATCTTAAAACCAAATGCAAAGTTGATTCCTTTTGAATATTATAGTCTGA 185864 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | || |||||||| || ||| ||| || | | ||| || || | || Sbjct 185863 GAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAGATAAGTCTTTGTTGATCTGGTGG 185804 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| ||| || ||| ||| || || |||| | || Sbjct 185803 AATACCTTCCTTATCTTGAATCTTTGATTTAACATTTTCAATTGTATCATTGGACTCGAC 185744 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| || || || ||||| || | |||||| |||||||||||||| Sbjct 185743 TTCCAATGTAATTGTCTTTCCTGTTAAAGTTTTGACGAAAATTTGCAT 185696 >seq27 Length=417575 Score = 100 bits (110), Expect = 2e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||||||| | | ||||| || | || || || ||||| |||||||||||||| Sbjct 23932 ACCACCTCTTAATCTGAGGACCAAGTGAAGGGTTGATTCCTTTTGAATATTGTAATCAGA 23991 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || |||||||| || ||| || || || | ||| || || | || Sbjct 23992 CAAGGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGAGG 24051 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || ||| || || ||| ||| ||||| |||| || ||| Sbjct 24052 AATACCTTCCTTATCTTGAATTTTGCTCTTAACGTTTTCAATGGTGTCATTGGATTCAAC 24111 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTATG 33376 |||| || || ||||| || || | ||||| |||||||||||||| || ||| Sbjct 24112 TTCCAAGGTAATAGTTTTACCAGTTAATGTTTTAACGAAAATTTGCATTTTAATG 24166 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| ||||| |||| || || || ||||| || ||||||||||| Sbjct 23476 ACCACCTCTCAATCTCAATACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGA 23535 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || |||||||| || ||| || || || | ||| || || | || Sbjct 23536 CAAGGTTCTTCCATCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGAGG 23595 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || ||| || || ||| ||| ||||| |||| | || Sbjct 23596 GATTCCTTCCTTATCTTGGATCTTAGACTTAACATTTTCAATTGTGTCATTGGACTCGAC 23655 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| || || || ||||| || | |||||| |||||||||||||| Sbjct 23656 TTCCAATGTAATGGTCTTTCCTGTTAAAGTTTTAACGAAAATTTGCAT 23703 >seq36 Length=416450 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/234 (69%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| ||||| | | ||| ||||| ||||| || || || ||||| |||||||| || | Sbjct 87082 CACCACCTCTGAGTCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATATTGTAGTCTG 87141 Query 33201 ACAAATTGAGTTGG----TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCC 33256 | | ||||| || ||||||||||| ||| || || || | ||| || || Sbjct 87142 AGA----GAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCT 87197 Query 33257 GTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGT 33316 | || || ||||| || || ||| || || ||| ||| |||||||||| | Sbjct 87198 GGAGGGATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTTTCAATAGTGTCGTTGGAT 87257 Query 33317 TGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 | || |||| ||| || || || || || || || || ||||||||||||||| Sbjct 87258 TCGACTTCCAAAGTGATAGTCTTACCAGTGAGGGTCTTGACGAAAATTTGCATG 87311 >seq30 Length=401612 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || |||||||| | |||||||||||| | || || |||||||| || ||||||||| Sbjct 53400 CCTCCTCTTAATCTCAACACCAAATGAAGAGTTGAATCTTTTTGAATGTTGTAATCATTA 53341 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | | | | || |||||||| ||||||| ||| || | | ||| || || | | Sbjct 53340 ATAGTTCTTCCATCTTCCAATTGTTTTCCACCAAAGATGAGTCTTTGTTGATCTGGTGAA 53281 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 || ||||| ||||| |||| || || ||| ||| | || || | || ||| Sbjct 53280 ATTCCTTCCTTTTCTTGAATCTTTGACTTGACATTTTCAATTGAATCATTTGATTCAACT 53221 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| ||| || |||||||| || || || || || || | |||||| Sbjct 53220 TCCAAAGTGATTGTTTTTCCAGTGAGTGTCTTGACAAATAATTGCAT 53174 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| ||||| || | |||||||||||||| || || || ||||| | |||||||| Sbjct 53630 CACCTCCTCTCAATCTCAACACCAAATGCACAGTAGAATCCTTTTGAAGGTTGTAATC-- 53573 Query 33201 ACAAATTG--AGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGT 33258 || ||||| | || || ||||| ||||| | | || || ||||| || || | Sbjct 53572 ACTAATTGTTCTTCCATCTTCTAATTGTTTTCCTGCATAAATCAATCGTTGTTGATCTGA 53513 Query 33259 GGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || |||||||| || || ||| ||||| | | | ||| || || || | || Sbjct 53512 AGGAATGCCTTCCTTATCAAATATCTTTTGTTTCATATTCTCAATAGTATCATTCGCTTC 53453 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 | || | ||| || |||||||| || | |||||||| || | |||||| Sbjct 53452 CATTTCAATAGTAATTGTTTTTCCAGTTAAGGTTTTTACAAAGAGTTGCAT 53402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318774554080032