Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20gruberi_20[genbank_20GCA_5F000004985.1_202010-01-20] 784 sequences; 40,964,085 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq41 105 5e-18 seq165 102 6e-17 seq81 102 6e-17 seq48 102 6e-17 seq42 102 6e-17 seq28 102 6e-17 seq37 100 2e-16 seq79 96.9 3e-15 seq27 96.9 3e-15 seq10 96.9 3e-15 seq52 95.1 9e-15 seq20 93.3 3e-14 seq18 93.3 3e-14 seq84 89.7 4e-13 seq30 87.8 1e-12 seq7 87.8 1e-12 >seq41 Length=362555 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||| |||||||||| || | ||| | || ||||| |||||||||||| | Sbjct 305372 TCCTTTTGAAGATTGTAATCACTTATAGTTCTTCCATCTTCCAATTGCTTACCGGCATAA 305313 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| |||||||| | |||| || ||||| || ||||||||||| | | Sbjct 305312 ATCAATCGTTGTTGATCTGATGGAATACCTTCCTTATCAAATATCTTTTGTTTCATATTC 305253 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | |||| || || |||| || | ||||| || ||||| || || ||||||||| Sbjct 305252 TCAACAGTATCAATCGATTCCATTTCAATTGTAATTGTCTTTCCAGTTAAGGTTTTTACA 305193 Query 48756 AAAATCTGCAT 48766 |||| ||||| Sbjct 305192 AAAAGTTGCAT 305182 >seq165 Length=11935 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||| |||||||||| | | ||| | || ||||| |||||||||||| | Sbjct 10148 TCCTTTTGAAGATTGTAATCACCAATAGTTCTTCCATCTTCCAATTGCTTACCGGCATAA 10207 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| |||||||| | |||| || ||||| || ||||||||||| | | Sbjct 10208 ATCAATCGTTGTTGATCTGAAGGAATACCTTCCTTATCAAATATCTTTTGTTTCATATTC 10267 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | |||| || || |||| || | || || || ||||| || |||||||||||| Sbjct 10268 TCAACAGTATCATTCGATTCCATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACA 10327 Query 48756 AAAATCTGCAT 48766 |||| ||||| Sbjct 10328 AAAAGTTGCAT 10338 >seq81 Length=182562 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||| |||||||||| | | ||| | || ||||| |||||||||||| | Sbjct 52354 TCCTTTTGAAGATTGTAATCACCAATAGTTCTTCCATCTTCCAATTGCTTACCGGCATAA 52295 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| |||||||| | |||| || ||||| || ||||||||||| | | Sbjct 52294 ATCAATCGTTGTTGATCTGAAGGAATACCTTCCTTATCAAATATCTTTTGTTTCATATTC 52235 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | |||| || || |||| || | || || || ||||| || |||||||||||| Sbjct 52234 TCAACAGTATCATTCGATTCCATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACA 52175 Query 48756 AAAATCTGCAT 48766 |||| ||||| Sbjct 52174 AAAAGTTGCAT 52164 >seq48 Length=342059 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||| |||||||||| | | ||| | || ||||| |||||||||||| | Sbjct 178188 TCCTTTTGAAGATTGTAATCACCAATAGTTCTTCCATCTTCCAATTGCTTACCGGCATAA 178129 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| |||||||| | |||| || ||||| || ||||||||||| | | Sbjct 178128 ATCAATCGTTGTTGATCTGAAGGAATACCTTCCTTATCAAATATCTTTTGTTTCATATTC 178069 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | |||| || || |||| || | || || || ||||| || |||||||||||| Sbjct 178068 TCAACAGTATCATTCGATTCCATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACA 178009 Query 48756 AAAATCTGCAT 48766 |||| ||||| Sbjct 178008 AAAAGTTGCAT 177998 >seq42 Length=358576 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||| |||||||||| | | ||| | || ||||| |||||||||||| | Sbjct 95035 TCCTTTTGAAGATTGTAATCACCAATAGTTCTTCCATCTTCCAATTGCTTACCGGCATAA 94976 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| |||||||| | |||| || ||||| || ||||||||||| | | Sbjct 94975 ATCAATCGTTGTTGATCTGAAGGAATACCTTCCTTATCAAATATCTTTTGTTTCATATTC 94916 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | |||| || || |||| || | || || || ||||| || |||||||||||| Sbjct 94915 TCAACAGTATCATTCGATTCCATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACA 94856 Query 48756 AAAATCTGCAT 48766 |||| ||||| Sbjct 94855 AAAAGTTGCAT 94845 >seq28 Length=413107 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||| |||||||||| | | ||| | || ||||| |||||||||||| | Sbjct 235251 TCCTTTTGAAGATTGTAATCACCAATAGTTCTTCCATCTTCCAATTGCTTACCGGCATAA 235192 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| |||||||| | |||| || ||||| || ||||||||||| | | Sbjct 235191 ATCAATCGTTGTTGATCTGAAGGAATACCTTCCTTATCAAATATCTTTTGTTTCATATTC 235132 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | |||| || || |||| || | || || || ||||| || |||||||||||| Sbjct 235131 TCAACAGTATCATTCGATTCCATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACA 235072 Query 48756 AAAATCTGCAT 48766 |||| ||||| Sbjct 235071 AAAAGTTGCAT 235061 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||| ||||||||| | | ||| | || ||||| |||||||||||| | Sbjct 97821 TCCTTTTGAAGATTGTAATCGCCAATAGTTCTTCCATCTTCCAATTGCTTACCGGCATAA 97762 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| |||||||| | |||| || ||||| || ||||||||||| | | Sbjct 97761 ATCAATCGTTGTTGATCTGAAGGAATACCTTCCTTATCAAATATCTTTTGTTTCATATTC 97702 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | |||| || || |||| || | ||||| || ||||| || || ||||||||| Sbjct 97701 TCAACAGTATCATTCGATTCCATTTCAATTGTAATGGTCTTTCCAGTTAAGGTTTTTACA 97642 Query 48756 AAAATCTGCAT 48766 |||| ||||| Sbjct 97641 AAAAGTTGCAT 97631 >seq37 Length=379849 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| | || || ||||||| ||||||||| || | | ||| | | || Sbjct 314410 CAATACCAAATGGACAGTTGAATCCTTTTGAAGATTGTAATCTGAGATAGTTCTACCATC 314469 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| || ||||| ||| | |||| || |||||||||| |||| || ||||| || Sbjct 314470 TTCCAATTGTTTACCAGCATAAATCAAACGTTGTTGATCCGATGGAATTCCTTCCTTATC 314529 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||||||||| | | | | || || || ||| || | ||||| || Sbjct 314530 AAAAATCTTTTGTTTCATATTCTCAATAGTGTCATTCGATTCCGTTTCAATAGTAATGGT 314589 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| ||||| ||||| ||||||| ||||| Sbjct 314590 CTTTCCTGTCAATGTTTTCACAAAAAGTTGCAT 314622 >seq79 Length=326815 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || | ||| ||||| || || ||| || |||||||||||||||||||| Sbjct 172500 CCACCTCTAAGTCTCAAAACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAATCAGAC 172559 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | | || ||||| |||||||| ||||| || |||| |||||||| | ||| Sbjct 172560 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATAAGTCTTTGTTGATCTGGTGGA 172619 Query 48660 ACGCCCTCCTTGTCGCTAATCTT 48682 | || ||||| || |||||| Sbjct 172620 ATACCTTCCTTATCTTGAATCTT 172642 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || | ||| ||||| || || ||| || |||||||||||||||||||| Sbjct 172728 CCACCTCTAAGTCTCAAAACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAATCAGAC 172787 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGC-AAATATCAGTCGCTGTTGATCCGTGGG 48658 | | ||| | | || ||||| |||||||| || ||| |||| || |||||||| | || Sbjct 172788 AAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAAGATCAATCTTTGTTGATCTGGAGG 172847 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | || ||||| || ||||||| || ||| | | | || | || || Sbjct 172848 GATACCTTCCTTATCTTGAATCTTTGACTTGACATTTTCAATGGTGTCGTTTGATTCAAC 172907 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || |||||||| || || ||||| ||||| Sbjct 172908 TTCCAGAGTGATTGTCTTACCAGTCAAAGTCTTGAC-AAAATTTGCAT 172954 >seq27 Length=417575 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || ||| || |||||||| ||||||||||| || ||| | || Sbjct 23263 CAAGACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGAAAGGGTTCTTCCATC 23322 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || || |||||||| ||||| || |||| |||||||| | |||| || |||||||| Sbjct 23323 TTCTAATTGCTTACCAGCAAAGATGAGTCTTTGTTGATCTGGTGGAATACCTTCCTTGTC 23382 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||||| || ||| | | || || | || || || | ||||| || Sbjct 23383 TTGAATCTTTGACTTGACATTTTCAATAGTATCATTAGATTCGACTTCAAGGGTAATTGT 23442 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||||||||| || || || ||||| Sbjct 23443 CTTACCAGTCAAAGTTTTGACGAAGATTTGCAT 23475 >seq10 Length=665159 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||| |||||||||| | | ||| | || ||||| |||||||||||| | Sbjct 273108 TCCTTTTGAAGATTGTAATCACCAATAGTTCTTCCATCTTCCAATTGCTTACCGGCATAA 273167 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| |||||||| | |||| || ||||| || ||||||||||| | | Sbjct 273168 ATCAATCGTTGTTGATCTGAAGGAATACCTTCCTTATCAAATATCTTTTGTTTCATATTC 273227 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | |||| | || |||| || | || || || ||||| || |||||||||||| Sbjct 273228 TCAACAGTAGCATTCGATTCCATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACA 273287 Query 48756 AAAATCTGCAT 48766 |||| ||||| Sbjct 273288 AAAAGTTGCAT 273298 >seq52 Length=331721 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| || | ||| || || || ||||||||||| ||||||||| Sbjct 165077 CCACCTCTTAATCTCAAAACAAGATGAAGAGTTGATTCCTTTTGAATATTATAATCAGAT 165136 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | ||| | || || || || ||||| ||||| |||| || |||||||| | ||| Sbjct 165137 AATGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 165196 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || ||||||| ||| ||| | | | || | ||| || Sbjct 165197 ATACCTTCCTTATCTTGAATCTTTGATTTAACATTTTCAATTGTATCATTGGACTCGACT 165256 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || ||||| || |||||||| || ||||| ||||| Sbjct 165257 TCCAATGTAATTGTCTTTCCTGTTAAAGTTTTGACGAAAATTTGCAT 165303 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 || |||||||| | || || ||||||||||| || || || ||| ||| | || Sbjct 185907 AAAACCAAATGCAAAGTTGATTCCTTTTGAATATTATAGTCTGAGAGAGTTCTTCCATCT 185848 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCG 48674 ||||| || ||||| ||||| || |||| |||||||| | |||| || ||||| || Sbjct 185847 TCCAATTGTTTACCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATACCTTCCTTATCT 185788 Query 48675 CTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTT 48734 ||||||| ||| ||| | | | || | ||| || |||| ||||| || Sbjct 185787 TGAATCTTTGATTTAACATTTTCAATTGTATCATTGGACTCGACTTCCAATGTAATTGTC 185728 Query 48735 TTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || |||||||| || ||||| ||||| Sbjct 185727 TTTCCTGTTAAAGTTTTGACGAAAATTTGCAT 185696 >seq20 Length=441990 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | | ||| || ||||| | || || ||||||| |||||||||| Sbjct 227804 CCACCCCTCAATCTCAAAACTAAATGCACAGTTGCATCCTTTTGAAGATTGTAATCACCA 227863 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || ||||| |||||||||||| | |||| ||| |||||||| | ||| Sbjct 227864 ATAGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGTTGATCTGAAGGA 227923 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACA-GAACCCACAGACTCTGACGCCTCCAC 48718 | || ||||| || ||||||||||| | | | |||| || || |||| Sbjct 227924 ATACCTTCCTTATCAAATATCTTTTGTTTCATATTCTTCAACAGTATCATTCGATTCCAT 227983 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || ||||| || || ||||||||||||| ||||| Sbjct 227984 TTCAATAGTGATTGTCTTTCCAGTTAAGGTTTTTACAAAAAGTTGCAT 228031 >seq18 Length=502116 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||| |||||||||| | | ||| | || ||||| |||||||||||| | Sbjct 87494 TCCTTTTGAAGATTGTAATCACCAATAGTTCTTCCATCTTCCAATTGCTTACCGGCATAA 87553 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| |||||||| | |||| || ||||| || ||||||||||| | | Sbjct 87554 ATCAATCGTTGTTGATCTGAAGGAATACCTTCCTTATCAAATATCTTTTGTTTCATATTC 87613 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | |||| || || |||| || | || || || ||||| || || ||||||||| Sbjct 87614 TCAACAGTATCATTCGATTCCATTTCAATAGTGATTGTCTTTCCAGTTAAGGTTTTTACA 87673 Query 48756 AAAATCTGCAT 48766 || | ||||| Sbjct 87674 AAGAGTTGCAT 87684 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | |||||||||||| || ||| ||||||||||| ||||||||| Sbjct 87686 CCTCCTCTTAATCTCAACACCAAATGAAGAGTGGAGTCTTTTTGAATGTTGTAATCATTA 87745 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || || || || ||||| ||||| || |||| |||||||| | | | Sbjct 87746 ATAGTTCTGCCATCTTCTAATTGTTTACCTGCAAAGATGAGTCTTTGTTGATCTGGTGAA 87805 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || | ||||||||| ||| | | || || | || ||| Sbjct 87806 ATTCCTTCCTTATCTTGTACCTTTTGTTTCACATTTTCAATTGAATCATTAGATTCAACC 87865 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||| |||| || | || || ||||| | ||||| Sbjct 87866 TCCAAAGTGATAGTTCTTCCAGTGAGTGTCTTGACAAATAATTGCAT 87912 >seq84 Length=160583 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || | |||||| ||||| | || || ||||||| |||||||||| Sbjct 128738 CCTCCTCTCAGTCTCAACACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCACTA 128797 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | ||| | || ||||| || || || ||| | |||| ||| |||||||| | ||| Sbjct 128798 ACTGTTCTTCCATCTTCCAATTGTTTTCCTGCATAAATCAATCGTTGTTGATCTGATGGA 128857 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||| || ||||||||||| | | | |||| || || |||| Sbjct 128858 ATTCCCTCCTTATCAAATATCTTTTGTTTCAAATGTTCAACAGTATCATTCGATTCCATT 128917 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || ||||| || | ||||||||||||| ||||| Sbjct 128918 TCAATTGTAATTGTCTTTCCAGTTAGGGTTTTTACAAAAAGTTGCAT 128964 >seq30 Length=401612 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 |||||||||||| | || || ||||||| ||||||||| | ||| | || Sbjct 53614 CAACACCAAATGCACAGTAGAATCCTTTTGAAGGTTGTAATCACTAATTGTTCTTCCATC 53555 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || || || || || ||| | |||| ||| |||||||| | |||| ||| ||||| || Sbjct 53554 TTCTAATTGTTTTCCTGCATAAATCAATCGTTGTTGATCTGAAGGAATGCCTTCCTTATC 53495 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||||||||| | | | | || || ||| |||| || | ||||| || Sbjct 53494 AAATATCTTTTGTTTCATATTCTCAATAGTATCATTCGCTTCCATTTCAATAGTAATTGT 53435 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||| || || ||||||||||| | ||||| Sbjct 53434 TTTTCCAGTTAAGGTTTTTACAAAGAGTTGCAT 53402 >seq7 Length=693645 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || ||||||| |||||||||| | ||| | || ||||| |||||||||||| | Sbjct 579093 TCCTTTTGAAGATTGTAATCACCAATGGTTCTTCCATCTTCCAATTGCTTACCGGCATAA 579152 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||| |||||||| | |||| || ||||| || ||||||||||| | | Sbjct 579153 ATCAATCGTTGTTGATCTGAAGGAATTCCTTCCTTATCAAATATCTTTTGTTTCATATTC 579212 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | |||| || | |||| || | ||||| || ||||| || || ||||||||| Sbjct 579213 TCAACAGTGTCGTTTGATTCCATTTCGATAGTAATTGTCTTTCCAGTTAAGGTTTTTACA 579272 Query 48756 AAAATCTGCAT 48766 || | ||||| Sbjct 579273 AAGAGTTGCAT 579283 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| || ||||| | || || ||||||| |||||||||| Sbjct 333878 CCTCCTCTTAATCTCAATACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCACTA 333819 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || ||||| || || || ||| | |||| ||| |||||||| | || Sbjct 333818 ATAGTTCTTCCATCTTCCAATTGTTTTCCTGCATAAATCAATCGTTGTTGATCTGAAGGG 333759 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || ||||||||||| | | | |||| || | |||| Sbjct 333758 ATACCTTCCTTATCAAATATCTTTTGTTTCATATTCTCAACAGTATCATTTGATTCCATT 333699 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| || ||||| ||||| ||||||||||||| ||||| Sbjct 333698 TCAATAGTAATTGTGTTTCCTGTCAATGTTTTTACAAAAAGTTGCAT 333652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380933960141232