Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20gruberi_20[genbank_20GCA_5F000004985.1_202010-01-20] 784 sequences; 40,964,085 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq27 143 6e-29 seq54 134 3e-26 seq36 134 3e-26 seq10 134 3e-26 seq52 127 4e-24 seq79 122 2e-22 seq66 114 3e-20 seq38 107 4e-18 seq8 100 6e-16 seq74 98.7 2e-15 seq7 86.0 1e-11 >seq27 Length=417575 Score = 143 bits (158), Expect = 6e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| |||||||| |||| ||| || | ||||| |||| ||| || || ||||| Sbjct 23284 TTCCTTTTGAATGTTGTAATCAGAAAGGGTTCTTCCATCTTCTAATTGCTTACCAGCAAA 23343 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||| || |||||||| ||||||||||| ||||||| || || | Sbjct 23344 GATGAGTCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACATT 23403 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || || ||||||||| || || || |||||||| |||||||| || || Sbjct 23404 TTCAATAGTATCATTAGATTCGACTTCAAGGGTAATTGTCTTACCAGTCAAAGTTTTGAC 23463 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 23464 GAAGATTTGCAT 23475 Score = 116 bits (128), Expect = 8e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| |||||||| || | | || | ||||| |||| ||| || || ||||| Sbjct 23740 TTCCTTTTGAATGTTGTAATCGGATAATGTTCTTCCATCTTCTAATTGCTTACCAGCAAA 23799 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||| || || || || || |||||||| ||||||| || || | Sbjct 23800 GATGAGTCTTTGTTGATCTGGAGGGATTCCTTCTTTGTCTTGAATCTTTGACTTGACATT 23859 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| | ||| ||||| | |||||| |||||||| ||||||||||| || Sbjct 23860 TTCAATGGTGTCGTTTGATTCAACTTCTAAAGTGATAGTCTTACCAGTCAAAGTCTTGAC 23919 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 23920 GAAGATTTGCAT 23931 Score = 111 bits (122), Expect = 3e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| |||||||||||||| |||| |||| || | ||||| || | |||||| || || | Sbjct 23512 TTCCTTTTGGATGTTGTAATCAGACAAG-GTTCTTCCATCTTCCAATTGTTTACCAGCGA 23570 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 | ||||| | |||||| || || || || ||||| ||||||||||| | || || Sbjct 23571 AAATCAATCTTTGTTGATCTGGAGGGATTCCTTCCTTATCTTGGATCTTAGACTTAACAT 23630 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || || ||||| | |||||||| | || || ||||| || || ||||| |||| Sbjct 23631 TTTCAATTGTGTCATTGGACTCGACTTCCAATGTAATGGTCTTTCCTGTTAAAGTTTTAA 23690 Query 283087 CGAATATCTGCAT 283099 |||| || ||||| Sbjct 23691 CGAAAATTTGCAT 23703 >seq54 Length=310422 Score = 134 bits (148), Expect = 3e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| |||||||| |||||||||| ||| || | |||||| || | ||| || || || || Sbjct 138185 TTCCTTTTGGATATTGTAGTCAGAAAGGGTTCTGCCATCTTCCAATTGCTTACCAGCGAA 138244 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | |||||| || || ||||| ||||||||||||||||| | || || | Sbjct 138245 AATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 138304 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| | ||||||||| | || || |||||||| ||||| || ||||| Sbjct 138305 TTCAATGGTGTCGTTTGATTCGACTTCCAAGGTAATTGTCTTACCAGTCAATGTTTTAAC 138364 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 138365 GAAGATTTGCAT 138376 >seq36 Length=416450 Score = 134 bits (148), Expect = 3e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| |||||||| |||||||| | || || | ||||| || | ||| || || || || Sbjct 87119 TTCCTTTTGGATATTGTAGTCTGAGAGAGTTCTACCATCTTCCAATTGCTTACCAGCGAA 87178 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | |||||| || || ||||| ||||||||||||||||| | || ||| | Sbjct 87179 GATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGGATCTTAGACTTGACGTT 87238 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| | ||||||||| | |||||| |||||||| || | ||||| || Sbjct 87239 TTCAATAGTGTCGTTGGATTCGACTTCCAAAGTGATAGTCTTACCAGTGAGGGTCTTGAC 87298 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 87299 GAAAATTTGCAT 87310 >seq10 Length=665159 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| || || ||| ||||| ||||| ||||||| || || | ||||| || Sbjct 188419 ACCAAATGCAAAGTTGATTCCTTTTGAATGTTATAGTCAGAGAGAGTTCTACCATCTTCC 188478 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || |||||||| | | |||||| || || || || |||||||||||| Sbjct 188479 AATTGCTTACCAGCAAAGATAAGTCTTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGG 188538 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||||| || || | || |||||||| | ||| ||||| | |||||| |||||| Sbjct 188539 ATCTTTGACTTAACATTTTCAATAGTGTCGTTTGATTCAACTTCTAAAGTGATAGTCTTA 188598 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||| || || || ||||| Sbjct 188599 CCAGTCAAAGTCTTGACAAAGATTTGCAT 188627 Score = 127 bits (140), Expect = 4e-24 Identities = 146/194 (75%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| || || ||||||| ||| || | ||||| || | |||||| || || || Sbjct 188664 TTCCTTTTGAATATTATAGTCAGAAAGGGTTCTTCCATCTTCCAATTGTTTACCAGCGAA 188723 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGG 283026 |||||||||||||| || |||||||| ||||| ||||| ||| ||||| || || Sbjct 188724 AATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGAATC-TTGCTCTTAACAT 188782 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || ||||| || | ||| ||||| | |||||| ||||| || || || || |||| Sbjct 188783 TTTCAATAGTATCGTTGGATTCAACTTCTAAAGTGATAGTCTTTCCTGTTAATGTTTTAA 188842 Query 283087 CGAATATCTGCATT 283100 |||| || |||||| Sbjct 188843 CGAAAATTTGCATT 188856 Score = 104 bits (114), Expect = 5e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| || || || || | | || | ||||| |||| |||||| || || || Sbjct 187980 TTCCTTTTGAATATTATAATCGGATAATGTTCTTCCATCTTCTAATTGTTTACCAGCGAA 188039 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||||||||||| || || ||||| ||||| ||||| ||||||| ||| || | Sbjct 188040 AATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTATCTTGAATCTTTGATTTGACATT 188099 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || | ||| ||||| | || || ||||| || || || || || || Sbjct 188100 TTCAATAGTATCATTGGATTCAACTTCCAATGTAATTGTCTTTCCTGTTAATGTTTTGAC 188159 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 188160 GAAAATTTGCAT 188171 >seq52 Length=331721 Score = 127 bits (140), Expect = 4e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| || || ||| ||||| ||||| ||||| | || || | ||||| || Sbjct 185448 ACCAAATGCAAAGTTGATTCCTTTTGAATGTTATAGTCTGAGAGAGTTCTTCCATCTTCC 185389 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || |||||||| | | |||||| || || ||||| ||||||||||| Sbjct 185388 AATTGTTTACCAGCAAAGATGAGTCTTTGTTGATCTGGTGGGATACCTTCCTTGTCTTGA 185329 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||||| ||| || | || |||||||| | ||| ||||| | || || |||||| Sbjct 185328 ATCTTTGATTTGACATTTTCAATAGTGTCGTTTGATTCAACTTCCAATGTAATTGTCTTA 185269 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTTCATATA 283108 || || || || |||||||| || |||||| | |||| Sbjct 185268 CCAGTTAATGTTTTAACGAAAATTTGCATTGTGTTATA 185231 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||| ||||| || |||| | || | ||||| || | |||||| || ||||| Sbjct 165340 TTCTTTTTGAATGTTATAATCAGATAATGTTCTTCCATCTTCCAATTGTTTACCAGCAAA 165399 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||| || |||||||| ||||||||||| || || | || || | Sbjct 165400 GATAAGTCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATTTTAGACTTGACATT 165459 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| | ||| ||||| | |||||| |||||||| |||||||| || || Sbjct 165460 TTCAATAGTGTCATTTGATTCAACTTCCAAAGTGATAGTCTTACCAGTCAAAGTTTTGAC 165519 Query 283088 GAATATCTGCAT 283099 || || ||||| Sbjct 165520 AAAGATTTGCAT 165531 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| || || || |||| | || | ||||| |||| |||||| || ||||| Sbjct 165568 TTCCTTTTGAATATTATAATCAGATAATGTTCTTCCATCTTCTAATTGTTTACCAGCAAA 165627 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || ||||||||||| || || || || ||||| ||||| ||||| | || || | Sbjct 165628 AATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTATCTTGAATCTTAGACTTGACATT 165687 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || ||||| || | ||||||||| | |||||| ||||| || || || || ||||| Sbjct 165688 TTCAATAGTATCATTGGATTCGACTTCCAAAGTGATAGTCTTTCCAGTTAATGTTTTAAC 165747 Query 283088 GAATATCTGCATTTTCATATA 283108 ||| || |||||| | |||| Sbjct 165748 GAAAATTTGCATTGTGTTATA 165768 >seq79 Length=326815 Score = 122 bits (134), Expect = 2e-22 Identities = 163/223 (73%), Gaps = 3/223 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| || || ||| ||||| ||||| ||||| | || || | ||||| || Sbjct 172974 ACCAAATGCAAAGTAGATTCCTTTTGAATGTTATAGTCTGAGAGGGTTCTACCATCTTCC 173033 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||||||||| | |||||| || || ||||| ||||| ||||| Sbjct 173034 AATTGCTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTATCTTGA 173093 Query 283011 ATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||| ||||| || || | || || ||||| | ||| ||||| | || || || || Sbjct 173094 ATC-TTGCTCTTAACATTTTCAATGGTGTCGTTTGATTCAACTTCCAAGGTAATAGTTTT 173152 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT-TTTCATATACAA 283111 ||| |||||||| |||||||| || ||||| ||| ||||||| Sbjct 173153 ACCGGTCAAAGTTTTAACGAAGATTTGCATCTTTAGTATACAA 173195 Score = 116 bits (128), Expect = 8e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGC-AA 282966 ||| ||||| || ||||| |||| | || | ||||| || | ||| || || || || Sbjct 172763 TTCCTTTTGAATATTGTAATCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCGAA 172822 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 ||||||| | |||||| || || ||||| ||||| ||||| ||||||| || || Sbjct 172823 AGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTATCTTGAATCTTTGACTTGACAT 172882 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || || ||||| | ||| ||||| |||||||| |||||||| ||||||||||| | Sbjct 172883 TTTCAATGGTGTCGTTTGATTCAACTTCCAGAGTGATTGTCTTACCAGTCAAAGTCTTGA 172942 Query 283087 CGAATATCTGCAT 283099 | || || ||||| Sbjct 172943 C-AAAATTTGCAT 172954 >seq66 Length=243952 Score = 114 bits (126), Expect = 3e-20 Identities = 247/367 (67%), Gaps = 2/367 (1%) Strand=Plus/Plus Query 43993 ACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGACTCCGTTTTAT 44052 ||||| |||||||| || ||| || || |||||||||| ||||| ||||| |||||| Sbjct 55454 ACATCAGAGTTGTATGGCTTGGTACAAGAAATTCCTCAAAAAGAAACTACTCCATTTTAT 55513 Query 44053 CCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAAAAATTATCGC 44112 || || ||| |||| | || ||| | || || |||||| || || ||| | Sbjct 55514 CCTCGATCTCCTTATGCTTGCGCTAAGTTGTACAGTTACTGGATTGTTATTAACTATAGA 55573 Query 44113 GAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAGTCCCAACAGA 44172 || | ||| ||||||| | ||| ||| ||||||||| |||||| | ||| Sbjct 55574 GAAGCTTATAACATGTTCGCCTTGAATGGTATTCTTTTCAATCATGAAAGTATCCGTAGA 55633 Query 44173 GGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTGCGAATATTT-TCAACGGGAC 44231 |||| || || || | |||||||| | || || || |||| || | || Sbjct 55634 GGTCCAACCTTTGTAACAAGAAAAATCACAATGGCAGTAGCTCGTATTCATCTA-GGTCT 55692 Query 44232 AGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGATATGCCTTGGA 44291 || | ||| ||||| | || || | || || ||||||||||||| | || ||| Sbjct 55693 TCAAGAGTGCTTGTATTTGGGTAATTTGGATGCTGAAAGAGATTGGGGCCACGCAAAGGA 55752 Query 44292 TTATGTAGAAGCCATGTGGCTGATGTTGCAACAAGACAGGTCAGACGACTACGTTATTGC 44351 ||| || || || |||||| ||||| | |||||||| | | || ||||| | |||| Sbjct 55753 TTACGTTGAGGCTATGTGGTTGATGCTCCAACAAGAGAAGCCATCAGACTATTGTGTTGC 55812 Query 44352 AACTGGA 44358 |||||| Sbjct 55813 CACTGGA 55819 Score = 114 bits (126), Expect = 3e-20 Identities = 250/368 (68%), Gaps = 6/368 (2%) Strand=Plus/Plus Query 43993 ACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGACTCCGTTTTAT 44052 || || || ||||| || |||||| || || || |||| ||||| ||||| || ||| Sbjct 115635 ACTTCTGAATTGTATGGTTTGGTTCAAGAAATCCCCCAAAAAGAAACCACTCCTTTCTAT 115694 Query 44053 CCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAAAAATTATCGC 44112 || || ||| |||| | || ||| | ||| || |||||| | |||||| | Sbjct 115695 CCTCGTTCTCCTTATGCTTGTGCAAAGTTGTATAGTTACTGGATTGTCATTAATTATAGA 115754 Query 44113 GAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAGTCCCAACAGA 44172 || | || ||||| | || || ||| |||||||||||||||| | ||| Sbjct 115755 GAAGCTTACAACATGTTTGCTTTGAACGGAATTCTTTTCAATCACGAAAGTATTAGAAGA 115814 Query 44173 GGTC-ATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTGCGAATATTTTCAACG-GGA 44230 || | | || || || || | || ||||| | || ||||| |||| || | ||| Sbjct 115815 GGACCAACATTT-GTAACCAGAAAGATCACTATGGCTGTTGCTCGTATT--CATCTTGGA 115871 Query 44231 CAGAAAAAT-GCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGATATGCCTTG 44289 | || || | ||||| | || || | || || ||||||||||||| ||||| | Sbjct 115872 TTGCAAGATTGTTTGTATTTGGGTAATTTGGATGCTGAAAGAGATTGGGGGCATGCCAAG 115931 Query 44290 GATTATGTAGAAGCCATGTGGCTGATGTTGCAACAAGACAGGTCAGACGACTACGTTATT 44349 |||||||| |||| |||||| ||||| | |||||||| | | ||| ||| ||| | || Sbjct 115932 GATTATGTTAAAGCTATGTGGTTGATGCTTCAACAAGAAAAGCCAGCCGATTACTGTGTT 115991 Query 44350 GCAACTGG 44357 || ||||| Sbjct 115992 GCCACTGG 115999 >seq38 Length=381539 Score = 107 bits (118), Expect = 4e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||| ||||| ||||| || || | |||| || | ||||| || | |||||| || |||| Sbjct 330658 TTCCTTTTGAATGTTATAATCGGACAAG-GTTCTTCCATCTTCCAATTGTTTACCAGCAA 330600 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 | |||||||||||||| || || || || || |||||||| ||||| || || Sbjct 330599 AAATCAAACGTTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTACTCTTGACAT 330540 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 | || || || || | ||||||||| | |||||| ||||| || || || || |||| Sbjct 330539 TTTCAATTGTATCATTGGATTCGACTTCCAAAGTGATAGTCTTTCCAGTTAATGTTTTAA 330480 Query 283087 CGAATATCTGCAT 283099 |||| || ||||| Sbjct 330479 CGAAAATTTGCAT 330467 Score = 104 bits (114), Expect = 5e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||||||||| ||||| |||| | || | || || ||||||||||| || ||||| Sbjct 331114 TTCTTTTTGGATATTGTAATCAGACAATGTTCTTCCGTCTTCTAGTTGTTTACCAGCAAA 331055 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || | | |||||| || || ||||| ||||| ||||| ||||||| || || | Sbjct 331054 TATAAGTCTTTGTTGATCTGGTGGGATACCTTCCTTATCTTGAATCTTTGACTTGACATT 330995 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || || || | ||| ||||| | || || || ||||| || || || ||||| Sbjct 330994 TTCAATTGTATCATTGGATTCAACTTCCAATGTAATGGTTTTACCAGTTAATGTTTTAAC 330935 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 330934 GAAAATTTGCAT 330923 >seq8 Length=938756 Score = 100 bits (110), Expect = 6e-16 Identities = 232/346 (67%), Gaps = 4/346 (1%) Strand=Plus/Minus Query 44014 GTTCAGGAGATTCCTCAAACAGAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTG 44073 ||||| || ||||| |||| ||||| ||||| || ||||| || |||||||| | Sbjct 717668 GTTCAAGAAATTCCACAAAAAGAAACCACTCCATTCTATCCACGTTCTCCATATGCTTGC 717609 Query 44074 GCGAAGCTATATGCCTATTGGATTTGTAAAAATTATCGCGAGTCGTATGGGATGTTCGTT 44133 || ||| | || ||||||||| || || ||| | || | || ||||| | | Sbjct 717608 GCCAAGTTGTACAGTTATTGGATTGTTATCAACTATAGAGAAGCTTACAATATGTTTGCT 717549 Query 44134 TGTAATTCGATTTGTTTCAATCACGAAAGTCCCAACAGAGGTCATCAGTTCGTGACTCGT 44193 | || ||| ||||||||| |||||| | |||| || || || | Sbjct 717548 TTGAACGGAATTCTTTTCAATCATGAAAGTATTCGTCGTGGTCCAACCTTTGTTACAAGA 717489 Query 44194 AAAATCACGAAAGCGGTTGCGAATATTTTCAACG-GGACAGAAAAAT-GCATGTATCTAG 44251 || || || | || ||||| |||| || | ||| | || || || ||||| | | Sbjct 717488 AAGATTACTATGGCTGTTGCTCGTATT--CATCTCGGATTGCAAGATTGCTTGTATTTGG 717431 Query 44252 GAAACATAGACTCTAAAAGAGATTGGGGATATGCCTTGGATTATGTAGAAGCCATGTGGC 44311 | || | || || |||||||||||||| |||| ||| ||||| |||||||||||| Sbjct 717430 GTAATTTGGATGCTGAAAGAGATTGGGGACATGCTAAGGACTATGTTGAAGCCATGTGGT 717371 Query 44312 TGATGTTGCAACAAGACAGGTCAGACGACTACGTTATTGCAACTGG 44357 ||||| | |||||||| | | ||| ||| || | |||| ||||| Sbjct 717370 TGATGCTCCAACAAGAAAAGCCAGCCGATTATTGTGTTGCCACTGG 717325 >seq74 Length=222118 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| | ||||| ||| || || | |||||| |||| |||||| |||||| | Sbjct 7900 TCCTTTTGAAGATTGTAATCATTAATAGTTCTGCCATCTTCTAATTGTTTACCGGCATAA 7841 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||||||||| || |||||||| ||||| || |||||| ||| | | Sbjct 7840 ATCAAACGTTGTTGATCTGAAGGAATACCTTCCTTATCAAATATCTTTTGTTTCATATTC 7781 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || | |||||| | ||| | ||||| ||| || ||||| || || || || || ||| Sbjct 7780 TCAACAGTGTCGTTTGATTCCATTTCGATAGTAATGGTCTTTCCAGTTAAGGTTTTTACG 7721 Query 283089 AATATCTGCATT 283100 || | |||||| Sbjct 7720 AAGAGTTGCATT 7709 >seq7 Length=693645 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 |||||||| |||||||||||| || || | |||||| || | |||||| || |||||| Sbjct 579321 TCTTTTTGAATGTTGTAGTCATTAATAGTTCTGCCATCTTCCAATTGTTTACCTGCAAAG 579380 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | |||||| || | ||| || ||||| ||||| | |||| ||| || | Sbjct 579381 ATGAGTCTTTGTTGATCTGGTGAAATTCCTTCCTTATCTTGTACCTTTCTTTTCACATTT 579440 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || | || | ||| || || | |||||| || | || || | ||||| || Sbjct 579441 TCAATTGAATCATTGGATTCAACCTCCAAAGTGATAGTTCTTCCAGTGAGTGTCTTGACA 579500 Query 283089 AATATCTGCATT 283100 |||| |||||| Sbjct 579501 AATAATTGCATT 579512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046728685504736