Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naegleria_20gruberi_20[genbank_20GCA_5F000004985.1_202010-01-20] 784 sequences; 40,964,085 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq36 131 1e-25 seq54 118 8e-22 seq79 114 9e-21 seq27 105 5e-18 seq7 105 5e-18 seq38 102 6e-17 seq74 100 2e-16 seq28 98.7 7e-16 seq18 91.5 1e-13 seq30 89.7 4e-13 seq84 84.2 2e-11 seq165 82.4 5e-11 seq81 82.4 5e-11 seq48 82.4 5e-11 seq42 82.4 5e-11 seq20 82.4 5e-11 >seq36 Length=416450 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| |||||||| |||| ||| | || ||||||||||| ||||| || | | Sbjct 87084 CCACCTCTGAGTCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATATTGTAGTCTGAG 87143 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || | | || |||| ||||| || || |||||||| | || ||||||| ||| Sbjct 87144 AGAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGGG 87203 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||||||||| || ||||| ||| | || | || |||||| |||||| || Sbjct 87204 ATACCTTCCTTGTCTTGGATCTTAGACTTGACGTTTTCAATAGTGTCGTTGGATTCGACT 87263 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGT 44342 |||| || || ||||| || ||||||||||| ||||| ||||||||| ||| Sbjct 87264 TCCAAAGTGATAGTCTTACCAGTGAGGGTCTTGACGAAAATTTGCATGGTGT 87315 >seq54 Length=310422 Score = 118 bits (130), Expect = 8e-22 Identities = 169/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 |||| | || ||||| |||||||| || | ||| || ||| ||||||||||| ||||| Sbjct 138143 TTTCTTACCACCTCTAAGTCTCAAGACTAAGTGGAGAGTGGATTCCTTTTGGATATTGTA 138202 Query 44164 ATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 || | || || || | || |||| ||||| || || || ||||| | || ||| Sbjct 138203 GTCAGAAAG--GGTTCTGCCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGA 138260 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| ||| | ||||||||| || ||||| ||| | || | ||||||||| Sbjct 138261 TCTGGAGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTTTCAATGGTGTCGTTT 138320 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || |||| ||||| ||||| || || | || || |||||||||||||| Sbjct 138321 GATTCGACTTCCAAGGTAATTGTCTTACCAGTCAATGTTTTAACGAAGATTTGCAT 138376 >seq79 Length=326815 Score = 114 bits (126), Expect = 9e-21 Identities = 173/243 (71%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 44098 TTTTTATTTCATTCCC-CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGA 44156 ||||||||| || || ||||||| |||||| |||| |||||| || |||||||| | Sbjct 172258 TTTTTATTTAGTTACCACCTCTCAATCTCAAGACCAAGTGAAGGGTTGATTCCTTTTGAA 172317 Query 44157 TGTTGTAATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACG 44214 |||| || || | || || || | || |||| ||||| || |||||||| | | Sbjct 172318 TGTTATAGTCAGAAAG--GGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATAAGTCT 172375 Query 44215 CTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGT 44274 || ||||||| || | ||||||||| || ||||| ||| | || | || || Sbjct 172376 TTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATCTTGCTCTTAACATTTTCAATAGT 172435 Query 44275 GTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTG 44334 || ||||| || || | ||||| ||||| || ||||| ||||| ||||||||||| Sbjct 172436 ATCATTAGATTCGACTTCAAGGGTAATTGTCTTACCAGTGAGAGTCTTGACGAAGATTTG 172495 Query 44335 CAT 44337 ||| Sbjct 172496 CAT 172498 Score = 114 bits (126), Expect = 9e-21 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| |||| || | || |||||||| ||||| || Sbjct 172949 TTGCATACCACCTCTCAATCTCAAAACCAAATGCAAAGTAGATTCCTTTTGAATGTTATA 173008 Query 44164 ATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 || | ||| || || | || |||| ||||| || ||||||||||| | || ||| Sbjct 173009 GTCTGAGAG--GGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGA 173066 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| ||| | ||||||||| || ||||| ||| | || | ||||||||| Sbjct 173067 TCTGGAGGGATACCTTCCTTATCTTGAATCTTGCTCTTAACATTTTCAATGGTGTCGTTT 173126 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || |||| ||||| || || || || | || || |||||||||||||| Sbjct 173127 GATTCAACTTCCAAGGTAATAGTTTTACCGGTCAAAGTTTTAACGAAGATTTGCAT 173182 Score = 109 bits (120), Expect = 4e-19 Identities = 167/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| |||||||| |||| ||| || ||| |||||||| || ||||| Sbjct 172493 TTGCATACCACCTCTAAGTCTCAAAACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTA 172552 Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| | | ||| | | || |||| ||||| || |||||||| | | || ||| Sbjct 172553 ATCAGACAAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATAAGTCTTTGTTGA 172610 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| || | ||||||||| || ||||| ||| | || | || || || Sbjct 172611 TCTGGTGGAATACCTTCCTTATCTTGAATCTTGCTCTTAACATTTTCAATAGTATCATTA 172670 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || | ||||| ||||| || ||||| ||||| |||||||||||||| Sbjct 172671 GATTCGACTTCAAGGGTAATTGTCTTACCAGTGAGAGTCTTGACGAAGATTTGCAT 172726 >seq27 Length=417575 Score = 105 bits (116), Expect = 5e-18 Identities = 179/255 (70%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 44086 AAAATTACATGATTTTTATTTCATTCCC-CCTCTCAGTCTCAACACCAGGTGAAGCGTGC 44144 ||| ||| ||||||| |||| || || ||||||| |||||| |||| ||| || ||| Sbjct 23224 AAAGTTAACTGATTTT-ATTTAGTTACCACCTCTCAATCTCAAGACCAAGTGGAGAGTGG 23282 Query 44145 TCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGC 44202 |||||||| ||||||||||| | || || || | || || | ||||| || || Sbjct 23283 ATTCCTTTTGAATGTTGTAATCAGAAAG--GGTTCTTCCATCTTCTAATTGCTTACCAGC 23340 Query 44203 AAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA 44262 |||||| | | || ||||||| || | ||||||||| || ||||| ||| | Sbjct 23341 AAAGATGAGTCTTTGTTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGACTTGAC 23400 Query 44263 TGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTT 44322 || | || || || ||||| || || | ||||| ||||| || || | || || Sbjct 23401 ATTTTCAATAGTATCATTAGATTCGACTTCAAGGGTAATTGTCTTACCAGTCAAAGTTTT 23460 Query 44323 CACGAAGATTTGCAT 44337 |||||||||||||| Sbjct 23461 GACGAAGATTTGCAT 23475 Score = 105 bits (116), Expect = 5e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| |||| ||| || || ||||||||||||||||| Sbjct 23470 TTGCATACCACCTCTCAATCTCAATACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTA 23529 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 ||| | | || | | | || |||| || || || || || ||||| | || |||| Sbjct 23530 ATCAGACAAGGT-TCTTCCATCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGTTGAT 23588 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| ||| | |||||||| || ||||| ||| | || | || ||||| || Sbjct 23589 CTGGAGGGATTCCTTCCTTATCTTGGATCTTAGACTTAACATTTTCAATTGTGTCATTGG 23648 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || |||| ||||| |||||||| || | || || ||||| |||||||| Sbjct 23649 ACTCGACTTCCAATGTAATGGTCTTTCCTGTTAAAGTTTTAACGAAAATTTGCAT 23703 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | |||||| || || || || || |||||||| |||||||| Sbjct 23698 TTGCATACCACCTCTTAATCTCAAAACAAGATGGAGAGTTGATTCCTTTTGAATGTTGTA 23757 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||| | | | | || || | ||||| || |||||||| | | || ||||| Sbjct 23758 ATCGGATAATGTTCTTCCATCTTCTAATTGCTTACCAGCAAAGATGAGTCTTTGTTGATC 23817 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | ||||| || || ||||| ||| | || | ||||||||| || Sbjct 23818 TGGAGGGATTCCTTCTTTGTCTTGAATCTTTGACTTGACATTTTCAATGGTGTCGTTTGA 23877 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || ||||| || || | ||||| |||||||||||||| Sbjct 23878 TTCAACTTCTAAAGTGATAGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCAT 23931 >seq7 Length=693645 Score = 105 bits (116), Expect = 5e-18 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| || | || | || |||||||| | |||||||| | Sbjct 579057 CCTCCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCACCA 579116 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| || | || |||| ||||| |||||| | ||||| || || |||||||||| Sbjct 579117 A--TGGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGTTGATCTGAAG 579174 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | |||||||| || |||||| || ||| || ||| | | |||||| |||||| Sbjct 579175 GAATTCCTTCCTTATCAAATATCTTTTGTTTC-ATATTCTCAACAGTGTCGTTTGATTCC 579233 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | ||||| |||||||| || | ||| || || |||| |||||| Sbjct 579234 ATTTCGATAGTAATTGTCTTTCCAGTTAAGGTTTTTACAAAGAGTTGCAT 579283 >seq38 Length=381539 Score = 102 bits (112), Expect = 6e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||||||||| ||| | || |||||||| ||||| || Sbjct 330700 TTGCATACCACCTCTCAATCTCAACACCAAGTGCAAAGTAGATTCCTTTTGAATGTTATA 330641 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 ||||| | || | | | || |||| || || || ||||| |||||||| || |||| Sbjct 330640 ATCGGACAAGGT-TCTTCCATCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGTTGAT 330582 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 ||| || | ||||| || || ||||| ||| | || | || || || || Sbjct 330581 CTGGTGGGATTCCTTCTTTGTCTTGAATCTTACTCTTGACATTTTCAATTGTATCATTGG 330522 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || |||| || || |||||||| || | || || ||||| |||||||| Sbjct 330521 ATTCGACTTCCAAAGTGATAGTCTTTCCAGTTAATGTTTTAACGAAAATTTGCAT 330467 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| || | || || || |||||||| ||||| || Sbjct 330928 TTGCATACCACCTCTCAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTGAATGTTATA 330869 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||| | | | | || |||| ||||| || ||||| || | | || ||||| Sbjct 330868 ATCGGATAATGTTCTACCATCTTCCAATTGCTTACCAGCAAATATAAGTCTTTGTTGATC 330809 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | ||||||||| || ||||| ||| | || | ||||||||| || Sbjct 330808 TGGTGGAATACCTTCCTTATCTTGAATCTTGCTCTTAACATTTTCGATGGTGTCGTTTGA 330749 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || ||||| || || | |||||| || ||||||||||| Sbjct 330748 TTCAACTTCTAAAGTGATAGTCTTACCAGTCAAGGTCTTGACAAAGATTTGCAT 330695 >seq74 Length=222118 Score = 100 bits (110), Expect = 2e-16 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 || || |||||| | |||||||| || ||||||||||| | ||||||||| || |||| Sbjct 7855 TGTTTACCGGCATAAATCAAACGTTGTTGATCTGAAGGAATACCTTCCTTATCAAATATC 7796 Query 44252 TTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310 || || ||| || ||| | | |||||| ||||||| || | ||||| |||||||| Sbjct 7795 TTTTGTTTC-ATATTCTCAACAGTGTCGTTTGATTCCATTTCGATAGTAATGGTCTTTCC 7737 Query 44311 CGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||| || ||||||| |||||| Sbjct 7736 AGTTAAGGTTTTTACGAAGAGTTGCAT 7710 >seq28 Length=413107 Score = 98.7 bits (108), Expect = 7e-16 Identities = 169/240 (70%), Gaps = 8/240 (3%) Strand=Plus/Minus Query 44101 TTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 |||||| | || ||||||| |||||| || | || | || |||||||| | || Sbjct 97865 TTATTTAA--CCACCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGAAGATT 97808 Query 44161 GTAATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGC 44218 ||||||| | | | | || | || |||| ||||| |||||| | ||||| || || Sbjct 97807 GTAATCGCCAA--TAGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGT 97750 Query 44219 TGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTC 44277 ||||||||||| | ||||||||| || |||||| || ||| || ||| | | || || Sbjct 97749 TGATCTGAAGGAATACCTTCCTTATCAAATATCTTTTGTTTC-ATATTCTCAACAGTATC 97691 Query 44278 GGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || | ||||| |||||||| || | ||| || || || | |||||| Sbjct 97690 ATTCGATTCCATTTCAATTGTAATGGTCTTTCCAGTTAAGGTTTTTACAAAAAGTTGCAT 97631 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| || | || | || |||||||| | |||||||| | Sbjct 235287 CCACCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCACCA 235228 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | | | || | || |||| ||||| |||||| | ||||| || || |||||||||| Sbjct 235227 A--TAGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGTTGATCTGAAG 235170 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || |||||| || ||| || ||| | | || || |||||| Sbjct 235169 GAATACCTTCCTTATCAAATATCTTTTGTTTC-ATATTCTCAACAGTATCATTCGATTCC 235111 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | || || |||||||| || | || || || || | |||||| Sbjct 235110 ATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACAAAAAGTTGCAT 235061 >seq18 Length=502116 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| || | || | || |||||||| | |||||||| | Sbjct 87458 CCACCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCACCA 87517 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | | | || | || |||| ||||| |||||| | ||||| || || |||||||||| Sbjct 87518 A--TAGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGTTGATCTGAAG 87575 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || |||||| || ||| || ||| | | || || |||||| Sbjct 87576 GAATACCTTCCTTATCAAATATCTTTTGTTTC-ATATTCTCAACAGTATCATTCGATTCC 87634 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | || || |||||||| || | ||| || || |||| |||||| Sbjct 87635 ATTTCAATAGTGATTGTCTTTCCAGTTAAGGTTTTTACAAAGAGTTGCAT 87684 Score = 87.8 bits (96), Expect = 1e-12 Identities = 165/241 (68%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||| | ||||||||||| ||||| ||| || ||||| |||||||| Sbjct 87679 TTGCATTCCTCCTCTTAATCTCAACACCAAATGAAGAGTGGAGTCTTTTTGAATGTTGTA 87738 Query 44164 ATC--GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| |||| | | || || | || || || |||||||| | | || ||| Sbjct 87739 ATCATTAATAGTT--CTGCCATCTTCTAATTGTTTACCTGCAAAGATGAGTCTTTGTTGA 87796 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| | | |||||||| || || ||| || |||| || | || | || Sbjct 87797 TCTGGTGAAATTCCTTCCTTATCTTGTACCTTTTGTTTCACATTTTCAATTGAATCATTA 87856 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| ||||||| || || || |||| ||||| ||||| || || | |||||| ||| Sbjct 87857 GATTCAACCTCCAAAGTGATAGTTCTTCCAGTGAGTGTCTTGACAAATAATTGCATTATG 87916 Query 44342 T 44342 | Sbjct 87917 T 87917 >seq30 Length=401612 Score = 89.7 bits (98), Expect = 4e-13 Identities = 170/244 (70%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 44097 ATTTTTATTTCATTCCC-CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGG 44155 || ||||||| | || ||||||| ||||||||||| || | || |||||||| Sbjct 53643 ATGTTTATTTAACCACCTCCTCTCAATCTCAACACCAAATGCACAGTAGAATCCTTTTGA 53584 Query 44156 ATGTTGTAATCGGCGAGTTGGCGCTCG-TCGTCCAGCTGCTTCCCGGCAAAGATCAAACG 44214 | ||||||||| | | ||| || || || | || || || ||| | ||||| || Sbjct 53583 AGGTTGTAATCA-CTAATTGTTCTTCCATCTTCTAATTGTTTTCCTGCATAAATCAATCG 53525 Query 44215 CTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGG 44273 || ||||||||||| | |||||||| || |||||| || ||| || ||| | || | Sbjct 53524 TTGTTGATCTGAAGGAATGCCTTCCTTATCAAATATCTTTTGTTTC-ATATTCTCAATAG 53466 Query 44274 TGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTT 44333 | || | ||||| || | ||||| || ||||| || | ||| || || |||| || Sbjct 53465 TATCATTCGCTTCCATTTCAATAGTAATTGTTTTTCCAGTTAAGGTTTTTACAAAGAGTT 53406 Query 44334 GCAT 44337 |||| Sbjct 53405 GCAT 53402 >seq84 Length=160583 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||||||||||||| | || | || |||||||| | |||||||| Sbjct 128738 CCTCCTCTCAGTCTCAACACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCACTA 128797 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 | | | | || |||| || || || ||| | ||||| || || |||||||| || Sbjct 128798 ACTGTTCTTCCATCTTCCAATTGTTTTCCTGCATAAATCAATCGTTGTTGATCTGATGGA 128857 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTC-AATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | || ||||| || |||||| || ||| |||||| | | || || ||||||| Sbjct 128858 ATTCCCTCCTTATCAAATATCTTTTGTTTCAAATGTT-CAACAGTATCATTCGATTCCAT 128916 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||||| |||||||| || ||||| || || || | |||||| Sbjct 128917 TTCAATTGTAATTGTCTTTCCAGTTAGGGTTTTTACAAAAAGTTGCAT 128964 >seq165 Length=11935 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| || | || | || |||||||| | |||||||| | Sbjct 10112 CCACCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCACCA 10171 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | | | || | || |||| ||||| |||||| | ||||| || || |||||||||| Sbjct 10172 A--TAGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGTTGATCTGAAG 10229 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || |||||| || ||| || ||| | | || || |||||| Sbjct 10230 GAATACCTTCCTTATCAAATATCTTTTGTTTC-ATATTCTCAACAGTATCATTCGATTCC 10288 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | || || |||||||| || | || || || || | |||||| Sbjct 10289 ATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACAAAAAGTTGCAT 10338 >seq81 Length=182562 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| || | || | || |||||||| | |||||||| | Sbjct 52390 CCACCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCACCA 52331 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | | | || | || |||| ||||| |||||| | ||||| || || |||||||||| Sbjct 52330 A--TAGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGTTGATCTGAAG 52273 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || |||||| || ||| || ||| | | || || |||||| Sbjct 52272 GAATACCTTCCTTATCAAATATCTTTTGTTTC-ATATTCTCAACAGTATCATTCGATTCC 52214 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | || || |||||||| || | || || || || | |||||| Sbjct 52213 ATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACAAAAAGTTGCAT 52164 >seq48 Length=342059 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| || | || | || |||||||| | |||||||| | Sbjct 178224 CCACCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCACCA 178165 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | | | || | || |||| ||||| |||||| | ||||| || || |||||||||| Sbjct 178164 A--TAGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGTTGATCTGAAG 178107 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || |||||| || ||| || ||| | | || || |||||| Sbjct 178106 GAATACCTTCCTTATCAAATATCTTTTGTTTC-ATATTCTCAACAGTATCATTCGATTCC 178048 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | || || |||||||| || | || || || || | |||||| Sbjct 178047 ATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACAAAAAGTTGCAT 177998 >seq42 Length=358576 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| |||||| || | || | || |||||||| | |||||||| | Sbjct 95071 CCACCTCTCAATCTCAATACTAAATGCACAGTTGAATCCTTTTGAAGATTGTAATCACCA 95012 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | | | || | || |||| ||||| |||||| | ||||| || || |||||||||| Sbjct 95011 A--TAGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGTTGATCTGAAG 94954 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || |||||| || ||| || ||| | | || || |||||| Sbjct 94953 GAATACCTTCCTTATCAAATATCTTTTGTTTC-ATATTCTCAACAGTATCATTCGATTCC 94895 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | || || |||||||| || | || || || || | |||||| Sbjct 94894 ATTTCAATAGTGATTGTCTTTCCAGTTAAAGTTTTTACAAAAAGTTGCAT 94845 >seq20 Length=441990 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/230 (69%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || |||| |||||| || | || | || |||||||| | |||||||| | Sbjct 227804 CCACCCCTCAATCTCAAAACTAAATGCACAGTTGCATCCTTTTGAAGATTGTAATCACCA 227863 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | | | || | || |||| ||||| |||||| | ||||| || || |||||||||| Sbjct 227864 A--TAGTTCTTCCATCTTCCAATTGCTTACCGGCATAAATCAATCGTTGTTGATCTGAAG 227921 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCA-ATGTTCCTATGGTGTCGGCGGATTCC 44287 | | ||||||||| || |||||| || |||| || | | | || || |||||| Sbjct 227922 GAATACCTTCCTTATCAAATATCTTTTGTTTCATATTCTTCAACAGTATCATTCGATTCC 227981 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | || || |||||||| || | ||| || || || | |||||| Sbjct 227982 ATTTCAATAGTGATTGTCTTTCCAGTTAAGGTTTTTACAAAAAGTTGCAT 228031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986960291728