Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F001049375.1_202015-06- 30] 165 sequences; 24,050,826 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq112 91.5 6e-13 >seq112 Length=800634 Score = 91.5 bits (100), Expect = 6e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 391134 AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAA 391193 || ||||| |||||||| || || |||||||||||||| ||| | || ||| | || || Sbjct 314637 AAGATTCAGGATAAGGAGGGTATCCCTCCTGATCAACAGCGTCTGATCTTCGCCGGCAAG 314578 Query 391194 CAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCAC 391253 || | || ||||| |||| ||||| ||||| || || | ||||| | ||||||||| Sbjct 314577 CAGTTGGAGGATGGCCGAACCTTGGCCGATTACAACATCCAGAAGGAGTCGACACTTCAC 314518 Query 391254 TTAGT 391258 || || Sbjct 314517 TTGGT 314513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975714223207820