Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F001049375.1_202015-06- 30] 165 sequences; 24,050,826 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq76 396 3e-105 seq46 316 3e-81 seq122 241 2e-58 seq24 167 3e-36 seq1 84.2 3e-11 >seq76 Length=455665 Score = 396 bits (438), Expect = 3e-105 Identities = 1073/1631 (66%), Gaps = 21/1631 (1%) Strand=Plus/Minus Query 6523 GTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTA-CTTTTCATCTTCATCTT 6581 |||||| || || || ||||||||||||||||| || ||| | | | || || || | | Sbjct 160888 GTAGTTCTCCAGGCCGTTCTTCGCCTCGACCTTCTT-GCGCAGCATCTCGTCGTCGTGCT 160830 Query 6582 TATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTAT 6641 | ||||| || || || ||| |||| || ||||| || || | | ||||| | Sbjct 160829 TGTACTTCTCGGCGTCGCGGATCATCGCCTCGATGTCCTCCTTGCTCAGACGGCCCTTGT 160770 Query 6642 CATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCA 6701 | ||||| ||||||||||| | | || || | | ||| || || || || || |||| Sbjct 160769 CGTTCGTGATCGTAATCTTCTGGCGCTTGCCGGTCGACTTGTCCTCGGCGCTGACGTTCA 160710 Query 6702 AAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGG 6761 ||||| || ||||| | || || | || | || || || ||| | ||| || | Sbjct 160709 GGATACCGTTGGCATCCAGGTCAAAGGTGACCTCGATCTGAGGGACACCACGCGGGGCCG 160650 Query 6762 CTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTT 6821 || || || | | || || | || || | |||| ||| ||| | | ||| | Sbjct 160649 GCGGGATGCCAGACAGCTCGAACTTGCCGAGCAGGTTGTTGTCCTTCGTCCGCGCACGCT 160590 Query 6822 CACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTT 6881 | || || | || | || || | || || || || ||| |||||||| | Sbjct 160589 CGCCCTCGAACACCTGGATCAGGACGCCGGGCTGGTTGTCGGCGTACGTCGAGAAGATCT 160530 Query 6882 GTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCA 6941 | | ||||| | || |||||||| || | | || | || ||||| | ||| || Sbjct 160529 GCTGCTTCTTGCACGGGATCGTCGTGTTGCGCTTGATGAGCGACGTCATGACACCGCCGG 160470 Query 6942 TAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG-TCTTGAACAGAT 7000 || |||| || || ||||| || | ||||||| || |||| ||||| | | | Sbjct 160469 CCGTCTCGATACCGAGCGACAGCGGGGCAACGTCCAGCAG---CAGGATCTTG--CTGGT 160415 Query 7001 TCGTTCCCT----TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGC 7056 || || || || | | ||||||||| ||||| | || ||||| ||||| || Sbjct 160414 CTCCTCGCTGGAGTCGCCGCTGAGGATGGCGGCCTGGACGGCGGCGCCGTAGGCGACGGC 160355 Query 7057 CTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTG 7116 |||||| ||||| |||| || | | || || ||| || | | | | || | Sbjct 160354 CTCATCCGGGTTGATCGACTTGCACGGCTCCTTGCCGCCGAAGAACTGCTTGATCAGCTC 160295 Query 7117 TTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT-T 7175 || | || ||||| || ||||| || ||||||| |||||||| | | | ||| | | Sbjct 160294 CTGGACCTTGGGGATACGCGTCGAGCCGCCGACCAGGACGATTTCGTGGA-TGTCGCTCT 160236 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGT 7235 | || ||| | ||| || || || ||||| || || | ||||| ||| Sbjct 160235 TGGAGAACTTGGCGTCGCGCAGGACCTTCTCGACCGGGATCAGCGTGTCCCGGAAGTAGT 160176 Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295 | |||||| |||| ||||| || || || || | | | ||| || | ||||||| Sbjct 160175 CGCCACACAGGGCCTCGAAACGCGCGCGCGTGATCGTCGAGTTGAAGTCGATGCCGTCGA 160116 Query 7296 ATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCT 7355 | ||| || || || | || | || | || ||| || | ||||||||| || |||| Sbjct 160115 GCAGCGAGTCGATCTCGACGGACGCCTGCGTCGACGACGACAGCGTTCGCTTGGCACGCT 160056 Query 7356 CACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTT 7415 | ||| |||||| | ||||| ||||| || ||| || | || || ||||| || | Sbjct 160055 CGCACTGCGTTCGCAGGCGACGCAGGGCGCGGTTGTTGCCCGTGATGTCCTTCTTGTGCT 159996 Query 7416 TACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCA 7475 | || || ||||| || | |||||| | | ||| | ||||| || || ||||| | Sbjct 159995 TGCGCTTGAACTCCTCGGCGAAGTGCTGGACGAGGCGGTTGTCGAAGTCCTCGCCACCGA 159936 Query 7476 AGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACG 7535 ||| || || || ||||| || ||||| || ||||| || | || || | | | | Sbjct 159935 GGTGGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATGCCGTCCTCGATTGTCAGGACGG 159876 Query 7536 AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTT--T 7593 | ||||| ||||||||||||||||||||||| || || |||||| ||| || || Sbjct 159875 AGACATCGAACGTACCACCACCCAGGTCAAAGATCAGGACGTTC--ATCTCCGATTTGGA 159818 Query 7594 GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653 |||||| ||||| ||||| ||||| || || || || || || || || ||||| || Sbjct 159817 GTTCTTGTCGAGGCCGTAGGCGATGGCGGCGGCGGTCGGCTCGTTGATGATACGGAGGAC 159758 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||||||||| ||||| | | || || |||||||| || || ||||| ||||| ||||| Sbjct 159757 GTTCAGGCCGGCAATCATACCAGCGTCCTTCGTCGCCTGACGCTGCGAGTCGTTGAAGTA 159698 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 ||| ||||| || | ||| |||| |||| | ||||| |||| || || | || Sbjct 159697 GGCGGGGACGGTGATGACGGCGTTGTTGACGGATTCGCCGAGGTACGCCTCGGCCGTCTC 159638 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 |||| ||| | || ||||| || || ||||| || | ||| ||| || || Sbjct 159637 CCTCATCTTGATGAGGACCATGGACGAGATCTCCTCCGGGTAGAACGTGCACGTGTCGCC 159578 Query 7834 GTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCA 7893 || | | || |||| || || | | || ||| | ||| ||| Sbjct 159577 CTTGTACTGGACCTCAAAGGCCGGGCGGTCGCCCTCCTTCTTGACGACCGTGAACGGCCA 159518 Query 7894 ATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGC 7953 ||||| ||| | || || |||| || ||||| | ||||| || ||||| || Sbjct 159517 CAGCTTCATGTCGGCCTGAACGATCGGGTCGGAGAACTTGCGGCCGATCAGGCGCTTGGC 159458 Query 7954 ATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAG 8013 ||| || ||||| | ||||| ||| | |||||||| || || || || || || Sbjct 159457 ATCGTGGACCGTGTTCTCCGGGTTTCGGGCAGCCTGGTTCTTGGCGGCCTCACCAATGAG 159398 Query 8014 ACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTT 8073 ||| || | || || || ||||||||||| || ||||| || || || |||||||| Sbjct 159397 ACGCTC---GGTCTCGGTGAAGGCGACGTACGACGGCGTCGTGCGGTTGCCCTGGTCGTT 159341 Query 8074 CGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAA 8133 ||||| || || ||| || ||| | |||| ||||||||||| ||||| || || | Sbjct 159340 GGCAATGATCTCCACGGCGTTGTTCTTCCAGCATCCGACGCACGAGTACGTCGTGCCGAG 159281 Query 8134 ATCAATACCGA 8144 || ||||||| Sbjct 159280 GTCGATACCGA 159270 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/75 (88%), Gaps = 7/75 (9%) Strand=Plus/Minus Query 131788 CGTGGCCGAGT-GGTCTAAGGCGCCAGATTAAGGCTCTGG-----TTCGGAAGAGCGCAG 131841 ||||||||||| |||||||||||||||||||||||||||| | |||||| |||||| Sbjct 379808 CGTGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGCTCTGGTCTTCTCCGGAAG-GCGCAG 379750 Query 131842 GTTCAAATCCTGTCG 131856 |||||||||||| || Sbjct 379749 GTTCAAATCCTGCCG 379735 >seq46 Length=577815 Score = 316 bits (350), Expect = 3e-81 Identities = 1063/1640 (65%), Gaps = 45/1640 (3%) Strand=Plus/Minus Query 6539 TTCTTCGCCTCGACCTTTTTCGCGTACTTT-----TCATCTTCATCTTTATACTTTTCCG 6593 |||||||||||||| |||| || | || || ||| | || ||||| || | Sbjct 515778 TTCTTCGCCTCGAC-----ACGCGCCCTGTGGGCGTCGTCGTCAGCCTTGTACTTCTCGG 515724 Query 6594 CATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCG 6653 | || | |||||||| || ||||| | || || | | | ||| || || || || | Sbjct 515723 CCTCCCGAACCATCTTCTCGATGTCGGCGTTGGACAGGCGCGACTTGTCGTTGGTGATGG 515664 Query 6654 TAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTG 6713 | ||||| | || || || | | ||| || || || || ||||||| || || || | Sbjct 515663 TGATCTTGTGCGACTTGCCGGTCGACTTGTCCTCGGCGCTGACATTCAGGATGCCGTTGG 515604 Query 6714 CATCAACATCGAACCTTACATTAATTTGTGGTGTACC-CCTCGGTGCGGCTGGAATACCC 6772 | || | |||||| | || | || || || ||| | | | | |||| | || ||| Sbjct 515603 CGTCGAGGTCGAACGTGACCTCGATCTGGGGCACACCACGTGGCTTCGGC-GCGATGCCC 515545 Query 6773 GTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAG 6832 || | | || | || || | | |||| ||| ||| | | || || ||||| || Sbjct 515544 GTCAGCTGGAACTTGCCCAGCAGATTGTTGTCCCTCGTCCGCGATCGCTCTCCTTCGAAG 515485 Query 6833 ACTTTAATTGTC-ACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTT 6891 || | || |||| ||||| || ||||| || ||| |||||| | || ||||| Sbjct 515484 ACCTGAA-TGTCGACCGCGGGCTGATTGTCGGCGTACGTCGAGAAGGTCTGCGTCTTCTT 515426 Query 6892 AGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAG 6951 | || | || || || ||||| || | || ||||| | || || || || | Sbjct 515425 GCACGGGACGGTGGTGTTCCTCGGGATCAGCGTCGTCATGACGCCGCCGGCCGTCTCAAT 515366 Query 6952 TCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC-TTGAACAGATTCGTTCCCTT 7010 || || ||||| || | |||||||| | | |||||| || | || |||| || | Sbjct 515365 GCCCAGCGACAGCGGCGCCACGTCCAGCAAGAGCAGGTCGTTCGCCTGACCCGTTGCCGT 515306 Query 7011 CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAA 7070 ||||| | |||||| || ||||| | ||||||| |||| |||||||| || ||||| | Sbjct 515305 -TCCCGTCAGGATGGCCGCCTGGACGGCCGCCCCGAATGCCACCGCCTCGTCCGGGTTGA 515247 Query 7071 TCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGA 7130 ||| | || || ||| ||| || ||| | ||| || || || |||| Sbjct 515246 TCGACTGGCACAACGTCTTCCCGCCAAAGTACGACGACAGCATGGCCTGGATCTTGGGGA 515187 Query 7131 TTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGT 7190 | || ||||| || ||||||| || | || | || | ||| || ||| |||| Sbjct 515186 TCCGCGTCGACCCGCCGACCAGGACCACCTCGTCGACCTGCGACTTGCTGATGCCCGAGT 515127 Query 7191 CTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCT 7250 | || | || || || ||| || || ||||| |||| ||||| ||| Sbjct 515126 CCTTCAGCACCTGGTCCACCGGGCCCAGGCACTTGTCGAACAGGTCCTGGCACAGCGCCT 515067 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || || || || || | | ||| || ||||||||| |||||||| | || Sbjct 515066 CGAATCGCGCCCGAGTGATCGTCGAGCTGAAGTCGGCGCCGTCGTGCAACGAATCGACTT 515007 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | || || | || | || ||| || | | || || || |||||| |||||| | Sbjct 515006 CGATCGTGGCCTGCGTCGACGACGACAGGGCGCGTTTCGCCTTCTCACATTGCGTTCGCA 514947 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATC-TTTCTTATGT--TTACGTTTAAACT 7427 ||||||||||| ||| |||| |||| | || | || || ||||| || | Sbjct 514946 GGCGACGAAGGGCGCGCTGGTTGCCGGTCAGGTCGGCGCCGCGGTTCTTGCGTTTGAATT 514887 Query 7428 CTTCAGAGAAGTGTCGAAGGAGTC--TCGAATCGAAATCTTCACCACCCAAGTGTGTATC 7485 | || |||||| | | ||| | ||| ||||| || || || |||| ||| || | Sbjct 514886 CGTCCACGAAGTGCTGCACGAGGCGGTCG--TCGAAGTCCTCGCCGCCCAGGTGCGTGTT 514829 Query 7486 CCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAA 7545 || || || || || || || |||| || || || || | | |||||| || || || Sbjct 514828 GCCGGCCGTGGCCTTCACCTCGAAGACGCCGCCGTCCATCGTCAGCAACGACACGTCGAA 514769 Query 7546 CGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC-GTCT------------- 7591 || || ||||||||||| || || || ||||| ||| | | || Sbjct 514768 GGTGCCGCCACCCAGGTCGAAGATTAGGACGTTGTGCTCGCCGGGCTGGCGGGACCCGGG 514709 Query 7592 -TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG 7650 | ||| || || ||||| ||||| ||||| |||||||| || || || |||||||| Sbjct 514708 GCCGCCCTTGTCCAGGCCGTAGGCGATGGCCGCTGCCGTTGGCTCGTTGATGATACGAAG 514649 Query 7651 ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAA 7710 ||||||||||||||| | || || ||||| || || || || | ||||| || Sbjct 514648 GACGTTCAGGCCAGCAATGCGACCGGCGTCCTTCGTGGCCTGCCGCTGAGCGTCGTTGAA 514589 Query 7711 GTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGAT 7770 |||||||||| || | ||| || || ||||| | || || |||| ||||| | Sbjct 514588 GTAGGCCGGGCAGGTGATGACAGCATCGGTGACGGGTTGGCCCAGGTACGCCTCCGCCGT 514529 Query 7771 ATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTC 7830 || ||||| ||||| || |||||||| || ||||| || | | ||| | ||||| | Sbjct 514528 CTCCTTCATCTTGGTCAGGACCATCGACGAGATCTCCTCCGGCTTGAACAGCTTCGTCTG 514469 Query 7831 ACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGA 7890 || | || || | || | || | ||| | || || ||| ||| Sbjct 514468 GCCCTGGTGCTCGACCTTGATGACTGGGCGCCCAGCATCGCCTTCGACAACGGCGAACGG 514409 Query 7891 CCA-ATCTTTCATATCGTCTTGGACCTGT-TGGTCCGAAAACTTTCTTCCGATAAGACGC 7948 ||| | ||| | || || || | || |||| | ||||| | ||||| || ||| Sbjct 514408 CCACAGCTTCCGATCCGACT--GAACGGTCGGGTCGGCGAACTTGCGACCGATCAGGCGC 514351 Query 7949 TTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCG 8008 || ||||| || | ||||| | |||||| || | |||||||| || ||||| ||| Sbjct 514350 TTGGCATCGAAGATCGTGTTGGTCGGGTTCCGAGCCGCCTGGTTCTTGGCGGCGTCGCCG 514291 Query 8009 ATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGG 8068 || || ||||| | || || ||||| || | || || || || || || |||||| Sbjct 514290 ATCAGGCGTTC---GGTGTCAGTGAACGCCACCCAGGACGGTGTTGTGCGGTTGCCTTGG 514234 Query 8069 TCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTT 8128 ||||| || || || || |||| |||| | ||||||||| || || ||||| || ||| Sbjct 514233 TCGTTGGCGATGATCTCAACGCTCCCGTTCTTCCAGACGCCAACACAGGAATATGTCGTT 514174 Query 8129 CCTAAATCAATACCGATTGC 8148 || | || |||||||| || Sbjct 514173 CCCAGGTCGATACCGATAGC 514154 Score = 315 bits (348), Expect = 9e-81 Identities = 1065/1642 (65%), Gaps = 49/1642 (3%) Strand=Plus/Plus Query 6539 TTCTTCGCCTCGACCTTTTTCGCGTACTTT-----TCATCTTCATCTTTATACTTTTCCG 6593 |||||||||||||| |||| || | || || ||| | || ||||| || | Sbjct 419776 TTCTTCGCCTCGAC-----ACGCGCCCTGTGGGCGTCGTCGTCAGCCTTGTACTTCTCGG 419830 Query 6594 CATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCG 6653 | || | |||||||| || ||||| | || || | | | ||| || || || || | Sbjct 419831 CCTCCCGAACCATCTTCTCGATGTCGGCGTTGGACAGGCGCGACTTGTCGTTGGTGATGG 419890 Query 6654 TAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTG 6713 | ||||| | || || || | | ||| || || || || ||||||| || || || | Sbjct 419891 TGATCTTGTGCGACTTGCCGGTCGACTTGTCCTCGGCGCTGACATTCAGGATGCCGTTGG 419950 Query 6714 CATCAACATCGAACCTTACATTAATTTGTGGTGTACC-CCTCGGTGCGGCTGGAATACCC 6772 | || | |||||| | || | || || || ||| | | | | |||| || || ||| Sbjct 419951 CGTCGAGGTCGAACGTGACCTCGATCTGGGGCACACCACGTGGCTTCGGC-GGGATGCCC 420009 Query 6773 GTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAG 6832 || | | || | || || | | |||| ||| ||| | | || || ||||| || Sbjct 420010 GTCAGCTGGAACTTGCCCAGCAGATTGTTGTCCCTCGTCCGCGATCGCTCTCCTTCGAAG 420069 Query 6833 ACTTTAATTGTC-ACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTT 6891 || | || |||| ||||| || ||||| || ||| |||||| | || ||||| Sbjct 420070 ACCTGAA-TGTCGACCGCGGGCTGATTGTCGGCGTACGTCGAGAAGGTCTGCGTCTTCTT 420128 Query 6892 AGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAG 6951 | || | || || || ||||| || | || ||||| | || || || || | Sbjct 420129 GCACGGGACGGTGGTGTTCCTCGGGATCAGCGTCGTCATGACGCCGCCGGCCGTCTCAAT 420188 Query 6952 TCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC-TTGAACAGATTCGTTCCCTT 7010 || || ||||| || | |||||||| || | |||||| || | || |||| || | Sbjct 420189 GCCCAGCGACAGCGGCGCCACGTCCAGCAGGAGCAGGTCGTTCGCCTGACCCGTTGCCGT 420248 Query 7011 CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAA 7070 ||||| | |||||| || ||||| | ||||||| |||| |||||||| || ||||| | Sbjct 420249 -TCCCGTCAGGATGGCCGCCTGGACAGCCGCCCCGAATGCCACCGCCTCGTCCGGGTTGA 420307 Query 7071 TCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGA 7130 ||| | || || ||| ||| || ||| | ||| || || || |||| Sbjct 420308 TCGACTGGCACAACGTCTTCCCGCCAAAGTACGACGACAGCATGGCCTGGATCTTGGGGA 420367 Query 7131 TTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGT 7190 | || ||||| || ||||||| || | || | || | ||| || ||| |||| Sbjct 420368 TCCGCGTCGACCCGCCGACCAGGACCACCTCGTCGACCTGCGACTTGCTGATGCCCGAGT 420427 Query 7191 CTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCT 7250 | || | || || || ||| || || ||||| |||| ||||| ||| Sbjct 420428 CCTTCAGCACCTGGTCCACCGGGCCCAGGCACTTGTCGAACAGGTCCTGGCACAGCGCCT 420487 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || || || || || | | ||| || | ||||||| |||||||| | || Sbjct 420488 CGAACCGCGCCCGAGTGATCGTCGAGCTGAAGTCGGCCCCGTCGTGCAACGAATCGACTT 420547 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAAC-GTTCGCTTTGCGC--GCTCACACGCCGTTC 7367 | || || | || |||||| || || | ||| || ||| |||||| ||||| Sbjct 420548 CGATCGTGGCCTG---CGTCGATGACGACAGGGCGCGTTTCGCCTTCTCACATTGCGTTC 420604 Query 7368 GTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC-TTTCTTATGT--TTACGTTTAA 7424 | | |||||||| || ||| |||| |||| | || | || || ||||| | Sbjct 420605 GCAGGCGACGAAGAGCGCGCTGGTTGCCGGTCAGGTCGGCGCCGCGGTTCTTGCGTTTGA 420664 Query 7425 ACTCTTCAGAGAAGTGTCGAAGGAGTC--TCGAATCGAAATCTTCACCACCCAAGTGTGT 7482 | || || |||||| | | ||| | ||| ||||| || || || |||| ||| || Sbjct 420665 ATTCGTCCACGAAGTGCTGCACGAGGCGGTCG--TCGAAGTCCTCGCCGCCCAGGTGCGT 420722 Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATC 7542 | || || || || || || || |||| || || || || | | |||||| || || Sbjct 420723 GTTGCCGGCCGTGGCCTTCACCTCGAAGACGCCGCCGTCCATCGTCAGCAACGACACGTC 420782 Query 7543 AAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC-GTCT---------- 7591 || || || ||||||||||| || || || ||||| ||| | |||| Sbjct 420783 GAAGGTGCCGCCACCCAGGTCGAAGATTAGGACGTTGTGCTCGCCGGTCTGGCGGGACCC 420842 Query 7592 ----TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 | ||| || || ||||| ||||| ||||| |||||||| || || || ||||| Sbjct 420843 GGGGCCGCCCTTGTCCAGGCCGTAGGCGATGGCCGCTGCCGTTGGCTCGTTGATGATACG 420902 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 ||| ||||||||||||||| | || || ||||| || || || || | ||||| Sbjct 420903 AAGGACGTTCAGGCCAGCAATGCGACCGGCGTCCTTCGTGGCCTGCCGCTGAGCGTCGTT 420962 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 || ||||||||| || | ||| || || ||||| | || || |||| ||||| Sbjct 420963 GAAATAGGCCGGGCAGGTGATGACAGCATCGGTGACGGGTTGGCCCAGGTACGCCTCCGC 421022 Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827 | || ||||| ||||| || |||||||| || ||||| || | | ||| | ||||| Sbjct 421023 CGTCTCCTTCATCTTGGTCAGGACCATCGACGAGATCTCCTCGGGCTTGAACAGCTTCGT 421082 Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887 | || | || || | || | || | ||| | || || ||| | Sbjct 421083 CTGGCCCTGGTGCTCGACCTTGATGACTGGGCGCCCAGCATCGCCTTCGACAACGGCGAA 421142 Query 7888 CGACCA-ATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGAC 7946 || ||| | ||| | ||| || || |||| | ||||| | ||||| || | Sbjct 421143 CGGCCACAGCTTGC-GATCCGACTGCACGGTCGGGTCGGCGAACTTGCGACCGATCAGGC 421201 Query 7947 GCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCC 8006 |||| ||||| || | ||||| | |||||| || | |||||||| || ||||| | Sbjct 421202 GCTTGGCATCGAAGATCGTGTTGGTCGGGTTCCGAGCCGCCTGGTTCTTGGCGGCGTCGC 421261 Query 8007 CGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTT 8066 |||| || ||||| | || || ||||| || | || || || || || || |||| Sbjct 421262 CGATCAGGCGTTC---GGTGTCAGTGAACGCCACCCAGGACGGCGTTGTGCGGTTGCCTT 421318 Query 8067 GGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTG 8126 ||||||| || || || || |||| |||| | ||||||||| || || |||||||| | Sbjct 421319 GGTCGTTGGCGATGATCTCAACGCTCCCGTTCTTCCAGACGCCAACACAGGAATACGTCG 421378 Query 8127 TTCCTAAATCAATACCGATTGC 8148 |||| | || |||||||| || Sbjct 421379 TTCCCAGGTCGATACCGATAGC 421400 >seq122 Length=778307 Score = 241 bits (266), Expect = 2e-58 Identities = 861/1335 (64%), Gaps = 16/1335 (1%) Strand=Plus/Minus Query 6818 CGTTCACCTTCATAGACTTTAATTGTC-ACCGCAGGTTGATTATCTTGTGCCGTTGAGAA 6876 ||||| || || ||||| | || ||| ||||||| || || || ||| ||||| Sbjct 191560 CGTTCGCCCTCGTAGACCTGGAT-GTCGACCGCAGACTGGTTGTCAGCGTACGTCGAGAA 191502 Query 6877 GATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACC 6936 | || ||||| | || | |||||| || | | || | || ||||| || || Sbjct 191501 CGTCTGCGTCTTCTTGCACGGCACCGTCGTGTTCCGCTTGATCAGTGGCGTCATGATGCC 191442 Query 6937 ACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAAC 6996 || || || || || | ||||| |||| |||||||| || ||||| | || | Sbjct 191441 GCCGGCCGTCTCCAGGCCCAACGACAGCGGTGCCACGTCCAGCAGCAACAGCTTCTGCGC 191382 Query 6997 AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGC 7056 |||| | ||||| | ||||||||| ||||| | || || || |||||||| Sbjct 191381 CTTCTCGTCGGCGGTTCCCGTCAGGATGGCGGCCTGGACGGCGGCGCCATACGCGACCGC 191322 Query 7057 CTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTG 7116 ||| || ||||| |||| | ||| || ||| ||| | | ||| | ||| || Sbjct 191321 CTCGTCCGGGTTGATCGACTGGCACAGCGTCTTCCCGCCAAAGAAGTTCGACAGCATCTG 191262 Query 7117 TTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTT 7176 || | ||||| || ||||| || ||||||| ||||| || | | | || || Sbjct 191261 CTGGACGCGGGGGATGCGGGTCGACCCGCCGACCAGGACGATCTCCTCGATCTGCGTCTT 191202 Query 7177 ATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTC 7236 || ||||| || || | ||||| || ||| || ||||| ||| Sbjct 191201 GCTTATGCCCGAGTCGCGGAGGACCTGCTCGACCGGCGCCAGGCACGACTCGAACAGGTC 191142 Query 7237 CATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTA 7296 |||||| |||| || || || || || || || | ||| || | ||| ||||| Sbjct 191141 GTGACACAGCGCCTCGAAGCGCGCCCGCGTGATCGACGAGCTGAAGTCGATGCCTTCGTA 191082 Query 7297 TAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTC 7356 | ||| || | || | || | ||| | || ||| || | | ||||| ||||| || Sbjct 191081 CAGCGAGTCCACCTCGACGGCCGCTTGCGTCGACGACGACAGGGCGCGCTTGGCGCGTTC 191022 Query 7357 ACACGCCGTTCGTAAACGACGAAGGGCACGCGGG--TTACCGGAAAT-ATCTTTCTTATG 7413 || |||||||||| || || ||||| || | || | || | | | | | | Sbjct 191021 GCAGGCCGTTCGTAGGCGGCGCAGGGCGCGTTGCGATTTCGTGATGTCAACGCCCCTGTT 190962 Query 7414 TTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAATCTTCACC 7470 || ||||| ||||| || ||||| | || ||||| | ||||| || || || Sbjct 190961 CTTGCGTTTGAACTCGTCGACAAAGTGCTTGACGAGGAGGTTG---TCGAAGTCCTCGCC 190905 Query 7471 ACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAA 7530 || | || || | || || || || ||||| || |||| || || || || | | Sbjct 190904 GCCGAGATGCGTGTTGCCGGCCGTGGCCTTGACCTCGAAGACGCCGCCCTCGATCGTCAG 190845 Query 7531 CAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT-CGT 7589 || ||| || || ||||| || || || ||||| || || || ||||| ||| || Sbjct 190844 CAGCGACACGTCGAACGTGCCGCCGCCGAGGTCGAAGATCAGGACGTTGTGCTCGCGCGA 190785 Query 7590 CTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 || | ||| ||||| ||||| ||||| || || || || || || || || ||||||| Sbjct 190784 CTCC-TCCTTGTCGAGGCCGTAGGCGATGGCGGCTGCGGTCGGCTCGTTGATGATACGAA 190726 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 | ||||||||| | || | || || ||||||| | ||||||||| ||||| | Sbjct 190725 GGACGTTCAGGCCGGAGATCCGCCCAGCGTCCTTCGTCGAATTTCGTTGCGAGTCGTTGA 190666 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769 ||||||| ||| || | || ||||| |||| | ||||| ||| ||||| Sbjct 190665 AGTAGGCGGGGCAGGTGATCACGGCGTCGTTGACCGGGTGCCCGAGGAACGCCTCCGCCG 190606 Query 7770 TATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTT 7829 | || ||||| ||||| || ||||| | || ||||| || | | ||||| ||||| | Sbjct 190605 TCTCCTTCATCTTGGTCAGGACCATGGCCGAGATCTCCTCCGGCTTGAACTGCTTCGTCT 190546 Query 7830 CACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACG 7889 || | | | || || || | || || | | | ||| ||||| ||| Sbjct 190545 GGCCCTGGTACTGGACCTCGATGACAGGCCGGTCGCCTTCGCTCCGGACGACCTTGAACG 190486 Query 7890 ACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCT 7949 ||| ||||| ||| ||||| |||| ||||| | ||||| || |||| Sbjct 190485 GCCACAGCTTCATGTCGGACTGGACGGCCGGGTCGTCGAACTTGCGGCCGATCAGGCGCT 190426 Query 7950 TTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGA 8009 | ||||| || | ||||| | |||||| |||| | |||||| |||||| ||||||| Sbjct 190425 TGGCATCGAAGATGGTGTTCTCCGGGTTCCTGGCCGCCTGGTTCAACGCCGCCTCCCCGA 190366 Query 8010 TAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGT 8069 | ||||| || | | | || ||||| || | || || || || || || ||||||| Sbjct 190365 TCAGACGCTCCTGGT---CGGTGAACGCCACCCAGGACGGCGTTGTGCGGTTGCCTTGGT 190309 Query 8070 CGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTC 8129 |||| || || || || || || | |||||||||| ||||| || || || || | Sbjct 190308 CGTTAGCGATGATGTCGACCGACCCGCTGCGCCAGACGCCCACGCAGGAGTAGGTCGTGC 190249 Query 8130 CTAAATCAATACCGA 8144 | | || || |||| Sbjct 190248 CGAGGTCGATGCCGA 190234 >seq24 Length=658195 Score = 167 bits (184), Expect = 3e-36 Identities = 239/336 (71%), Gaps = 3/336 (1%) Strand=Plus/Plus Query 7501 GACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG 7560 |||||| |||| || | ||||| | | | ||| ||||| || |||||||| || || Sbjct 502209 GACTTCGAAGACTCCGTCGTCAATAGTCAGAAGCGAGACATCGAAGGTACCACCGCCAAG 502268 Query 7561 GTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGC 7620 ||| | | || | |||| | || | | | || || ||| || ||||||||||| || Sbjct 502269 GTCGTACACCAGGATGTTCTTCTCCTTGCCCTT---CTGATCCAGGCCGTACGCGATCGC 502325 Query 7621 CGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATC 7680 || ||||| || || || || ||||| || ||||||||| || || || | ||||| Sbjct 502326 GGCGGCCGTCGGCTCGTTGATGATACGGAGGACGTTCAGGCCGGCGATCTTTCCGGCATC 502385 Query 7681 TTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGT 7740 ||||||||||| || || | ||||| |||||||| |||||||| | ||| || | | Sbjct 502386 CTTCGTCGCTTGACGCTGGGCGTCGTTGAAGTAGGCTGGGACCGTGATGACGGCCGACTT 502445 Query 7741 GACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800 ||||| | || || |||| || ||| | |||||||| ||||| || ||||||| || Sbjct 502446 GACTTCGTGGCCCAGGTACGCCTCAGCGGTTTCTTTCATCTTGGTCAGGACCATCGCGGA 502505 Query 7801 AATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTT 7836 ||||| || | ||||| | ||| | | ||||| Sbjct 502506 GATCTCCTCCGGGGCAAATTCCTTCTTCTTGCCGTT 502541 Score = 104 bits (114), Expect = 3e-17 Identities = 118/158 (75%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 ||||||||||| ||||| ||||| |||||||| | | | || |||||||||||||| Sbjct 502748 TGGTTCTTCGCGGCGTCTCCGATCAGACGTTCGGTGT---CGGTGAACGCGACGTACGAC 502804 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || || |||| || || |||||||| || | ||| || || || |||| | | || Sbjct 502805 GGCGTAATTCGGTTACCCTGGTCGTTGGCGACAATCTCGACACGCCCGTTCTTGAACACA 502864 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||||| |||||||| || ||||| | ||| || || || Sbjct 502865 CCGACACACGAATATGTCGTTCCAAGATCGATTCCAAT 502902 >seq1 Length=1189627 Score = 84.2 bits (92), Expect = 3e-11 Identities = 62/70 (89%), Gaps = 7/70 (10%) Strand=Plus/Plus Query 131790 TGGCCGAGT-GGTCTAAGGCGCCAGATTAAGGCTCTGG-----TTCGGAAGAGCGCAGGT 131843 ||||||||| |||||||||||||||||||||||||||| | |||||| |||||||| Sbjct 238197 TGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGCTCTGGTCTTCTCCGGAAG-GCGCAGGT 238255 Query 131844 TCAAATCCTG 131853 |||||||||| Sbjct 238256 TCAAATCCTG 238265 Score = 84.2 bits (92), Expect = 3e-11 Identities = 62/70 (89%), Gaps = 7/70 (10%) Strand=Plus/Plus Query 131790 TGGCCGAGT-GGTCTAAGGCGCCAGATTAAGGCTCTGG-----TTCGGAAGAGCGCAGGT 131843 ||||||||| |||||||||||||||||||||||||||| | |||||| |||||||| Sbjct 239106 TGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGCTCTGGTCTTCTCCGGAAG-GCGCAGGT 239164 Query 131844 TCAAATCCTG 131853 |||||||||| Sbjct 239165 TCAAATCCTG 239174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131490038600