Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq179 161 1e-34 seq334 145 8e-30 seq634 129 6e-25 seq377 111 2e-19 seq1 111 2e-19 seq45 109 6e-19 >seq179 Length=351413 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || || || ||||| || | |||||||| | Sbjct 23371 ATGCAGATCTTCGTCAAGACGCTGACAGGAAAGACCATTACGCTTGACGTCGACTCGGGT 23312 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||||| | |||| || |||| ||||||||||| || ||| |||||||| Sbjct 23311 GACACAATCGAAACGGTGAAGGCCAAGATTCAGGACAAAGAGGGTATTCCCCCGGACCAG 23252 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| |||||||| || | ||||||||| |||||||||| Sbjct 23251 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTCGCCGACTACAAC 23192 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | ||| ||||||| || |||| || | ||||| Sbjct 23191 ATCCAGAAGGAGTCGACGTTGCATCTCGTTCTGCGACTGCGTGGCGG 23145 Score = 145 bits (160), Expect = 8e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| |||||||| || || || | ||||| || | | Sbjct 22678 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACGATTACACTGGACGTGGACAGCGGC 22619 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | ||| | |||| || || | || || ||||||||||| |||||||| Sbjct 22618 GATACGATCGAGACGGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCGCCGGACCAG 22559 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| |||||||| || | ||||||||| |||||||||| Sbjct 22558 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTCGCCGACTACAAC 22499 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | || |||||||| || |||| Sbjct 22498 ATCCAGAAGGAGTCGACACTGCATCTCGTCCTGCG 22464 Score = 145 bits (160), Expect = 8e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || || || ||||| || | |||||||| | Sbjct 22909 ATGCAGATCTTCGTCAAGACGCTGACAGGGAAGACCATTACGCTTGACGTCGACTCGGGT 22850 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | |||| | |||| || |||| ||||| ||||| || ||| ||||||| Sbjct 22849 GACACGATCGAAACTGTGAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAA 22790 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| |||||||| || | ||||||||| |||||||||| Sbjct 22789 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTCGCCGACTACAAC 22730 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | ||| ||||||| || |||| Sbjct 22729 ATCCAGAAGGAGTCGACGTTGCATCTCGTTCTGCG 22695 Score = 145 bits (160), Expect = 8e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| |||||||| |||||||| | || ||||| | | Sbjct 23602 ATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACCATCACATTGGATGTCGACTCAGGC 23543 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| |||| | || |||| ||||| ||||||||||| | || || Sbjct 23542 GACACGATCGAGACGGTCAAAGCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGATCAA 23483 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | || || || |||||||| || | ||||||||| |||||||||| Sbjct 23482 CAGCGTCTGATTTTTGCCGGAAAGCAGCTGGAGGATGGTCGCACCCTCGCCGACTACAAC 23423 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | ||||||||||| || |||| Sbjct 23422 ATCCAGAAGGAGTCGACGCTGCATCTCGTCCTGCG 23388 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| || || || | || || || | | Sbjct 23833 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACGATTACGCTGGATGTGGACAGCGGC 23774 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | || || ||||||||||| | |||||| Sbjct 23773 GACACGATCGAGACGGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCGCCTGACCAG 23714 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| |||||||| |||| |||||| || ||||||||| Sbjct 23713 CAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGGCGGACTACAAC 23654 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || ||||||||| | ||||||||||| || |||| || | ||||| Sbjct 23653 ATTCAGAAGGAGTCGACGCTGCATCTCGTCCTGCGTCTGCGTGGCGG 23607 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || || || |||||||| | || ||||| | | Sbjct 23140 ATGCAGATCTTCGTCAAGACGCTGACAGGGAAGACCATCACATTGGATGTCGACTCAGGC 23081 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || |||| || || ||||| ||||| | || || Sbjct 23080 GACACGATCGAGACGGTGAAGGCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGATCAA 23021 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||| |||| || | || ||| | ||| |||||| Sbjct 23020 CAGCGTCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGAACCTTGGCCGATTACAAC 22961 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || || || Sbjct 22960 ATCCAGAAGGAGTCGACACTTCA 22938 >seq334 Length=1041161 Score = 145 bits (160), Expect = 8e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| || ||||| | |||||||| | Sbjct 526888 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATCACGCTGGACGTCGACTCTGGT 526947 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | || |||||| ||||| | ||||| ||||| ||||| |||||||| Sbjct 526948 GACACCATCGAGACTGTCAAGGCGAAAATCCAGGACAAGGAGGGTATCCCGCCGGACCAG 527007 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||||| || ||||||||||| || || | |||||| || |||||||||| Sbjct 527008 CAGCGACTCATCTTTGCCGGCAAACAGCTCGAGGATGGGCGCACGCTTGCCGACTACAAC 527067 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||| || | ||||| || || || |||| Sbjct 527068 ATCCAGAAAGAATCGACGCTTCACCTCGTCCTGCG 527102 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| || || |||||||| | || ||||| | Sbjct 527350 ATGCAGATCTTCGTGAAGACGCTCACTGGGAAGACCATCACTCTGGATGTCGATTCTGGT 527409 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | || |||||| || |||| ||||| || |||||||| | |||||| Sbjct 527410 GACACCATCGAGACTGTCAAGGCGAAGATTCAGGACAAGGAAGGCATCCCGCCAGACCAG 527469 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||||| || |||||||| |||| |||||| ||| ||||||||| Sbjct 527470 CAGCGTCTGATCTTTGCGGGGAAGCAGCTGGAGGACGGGCGCACGCTCGCGGACTACAAC 527529 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || || || || Sbjct 527530 ATCCAGAAGGAGTCCACCCTCCACCTTGT 527558 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || |||||||| |||||||||| || | Sbjct 526657 ATGCAGATCTTCGTGAAGACCTTGACCGGGAAGACCATCACGCTCGACGTCGACTCCGGC 526716 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| |||||| || || | ||||| ||||| ||||| |||||||| Sbjct 526717 GACACGATCGAGACGGTCAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGACCAG 526776 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| ||||| || || | ||||| ||| |||||||||| Sbjct 526777 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACACTCGCCGACTACAAC 526836 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || |||||||| | ||||| || || || |||| Sbjct 526837 ATTCAGAAGGAATCGACGCTTCACCTCGTTCTGCG 526871 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||||||||| || ||||| || ||||| || ||||| |||| || | | | Sbjct 945016 ATGCAAATATTCGTCAAGACGCTTACCGGCAAGACGATCACACTCGATGTGGCGTCGTCG 945075 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| |||||||| || ||||||| Sbjct 945076 GACACGATCGAGGCCGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGACCAA 945135 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || || |||||||| |||| ||||| || |||||||||| Sbjct 945136 CAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGCACGCTGGCCGACTACAAC 945195 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | |||||||| || || Sbjct 945196 ATCCAGAAGGAGTCGACGCTGCACCTCGT 945224 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||| || |||||||||| | Sbjct 526426 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATTACGCTCGACGTCGACAGCGGT 526485 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | || | |||| || || | ||||| ||||| || || | |||||| Sbjct 526486 GACACGATCGAGACCGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCGCCCGACCAG 526545 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| ||| || || ||||||||| Sbjct 526546 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGGCGGACGCTAGCCGACTACAAT 526605 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | |||||||| || || |||| Sbjct 526606 ATCCAGAAGGAGTCGACGCTGCACCTTGTTCTGCG 526640 Score = 122 bits (134), Expect = 9e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| || ||||| | |||||||| | Sbjct 527119 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACGATCACGCTGGACGTCGACTCTGGT 527178 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | || |||||| ||||| | ||||| ||||||||||| | ||||| Sbjct 527179 GATACGATCGAGACTGTCAAGGCGAAAATCCAGGACAAGGAGGGCATCCCGCCCGACCAA 527238 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || || | ||||| || |||||||||| Sbjct 527239 CAGCGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGACGCACGCTTGCCGACTACAAC 527298 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||| ||| | || ||||| || ||| |||| Sbjct 527299 ATCCAGAAAGAGTCGACTCTGCACCTGGTGCTGCG 527333 >seq634 Length=872753 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || ||||| |||| ||||| | | Sbjct 526881 ATGCAGATCTTCGTGAAGACCCTGACGGGTAAGACGATCACGCTCGATGTCGACTCGGGC 526822 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | || |||||| || || | ||||| ||||| || || ||||||| Sbjct 526821 GACACGATCGAGACCGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 526762 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | |||||| ||| |||||||||| Sbjct 526761 CAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGGCGCACGCTCGCCGACTACAAC 526702 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | ||| |||| || || Sbjct 526701 ATCCAGAAGGAGTCGACGTTGCACCTCGT 526673 >seq377 Length=2385 Score = 111 bits (122), Expect = 2e-19 Identities = 277/429 (65%), Gaps = 54/429 (13%) Strand=Plus/Plus Query 116822 GAGGTGCAGGTGGCC-GAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGT 116880 || ||||| ||||| || | ||| |||||||| || || || | || ||||||||| | Sbjct 903 GAAGTGCAA-TGGCCAGAAGTGCGATGCTTCTATGGATTCCAACTTGCTATGGAGAACAT 961 Query 116881 GCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCT 116940 |||||||| | ||| ||| | ||||||||||| | | ||| || ||||| | Sbjct 962 TCACTCGGAGACGTACTCGTTGTTGATCGACACGTATATCAGAAATTCCGAAGAGAAACA 1021 Query 116941 CCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCT 117000 || ||||| ||||| ||||||||||| ||||| ||| | |||| || | ||||| || Sbjct 1022 ACGGTTGTTCAACGCGATCGAGACGATTCCGTGTGTCCAGAAGAAAGCAAAATGGGCACT 1081 Query 117001 GCGCTGGATCG---------------CCGGCAG------------------AGAGGCCGC 117027 | |||||||| ||| || || ||||| Sbjct 1082 GAACTGGATCGGAGACGACTCGACATTCGGTAGTGTACTTGTGCTGTGAATCGACGCCGC 1141 Query 117028 CTTC------------------GGCGA-GCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCG 117068 | || |||| || || ||||| ||||| || ||||| ||| Sbjct 1142 CATCAACTGACAGATGCTTCCTAGCGATCCGGCTTGTGGCGTTCGCAGCAGTCGAAGGCA 1201 Query 117069 TCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCG 117128 | ||||| || ||| | | || || ||||| || || || || || |||| || Sbjct 1202 TTTTCTTCAGCGGATCGTTCTGCTCGATTTTCTGGCTGAAAAAGCGGGGGCTTATGCACG 1261 Query 117129 GCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCT 117188 | || | |||||||| ||||| || || | ||||| || ||||||||||| ||||||| Sbjct 1262 GGTTGTCGTTCAGCAATGAGCTTATATCTCGCGACGAAGGGCTGCATTGCGATTTTGCCT 1321 Query 117189 GTTTGCTGT 117197 ||||||||| Sbjct 1322 GTTTGCTGT 1330 Score = 104 bits (114), Expect = 2e-17 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| ||||| |||||||| ||||||||| | |||||||| | | | | Sbjct 606 GAGCCCATGCTGATGGAGAACCCGAACCGGTTCGTCCTCTTCCCCATCGAGCATTCATCC 665 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 | ||| |||||||| || | || ||||||||||||| || ||| | |||||| Sbjct 666 GTTTGGGAGATGTACAAGAAACATGTCGCATCGTTCTGGACCGCGGAAGAGATTGACCTG 725 Query 116696 TC-CAAGGACACGAGCGACTGGGAG-CGCTTGAACGACAACGAGCGCCATTTCATCAAGC 116753 || |||| ||| || || |||| | ||||| ||||| ||||| | |||||||||||| Sbjct 726 TCGCAAGATCACAAG-GATTGGGCGGCGCTT-AACGATGACGAGAGACATTTCATCAAGA 783 Query 116754 ACGTGCTGGCCTTTTTCGCCGCCAG 116778 |||| |||||||| || ||||| || Sbjct 784 ACGTCCTGGCCTTCTTTGCCGCAAG 808 >seq1 Length=1479440 Score = 111 bits (122), Expect = 2e-19 Identities = 277/429 (65%), Gaps = 54/429 (13%) Strand=Plus/Minus Query 116822 GAGGTGCAGGTGGCC-GAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGT 116880 || ||||| ||||| || | ||| |||||||| || || || | || ||||||||| | Sbjct 1040728 GAAGTGCAA-TGGCCAGAAGTGCGATGCTTCTATGGATTCCAACTTGCTATGGAGAACAT 1040670 Query 116881 GCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCT 116940 |||||||| | ||| ||| | ||||||||||| | | ||| || ||||| | Sbjct 1040669 TCACTCGGAGACGTACTCGTTGTTGATCGACACGTATATCAGAAATTCCGAAGAGAAACA 1040610 Query 116941 CCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCT 117000 || ||||| ||||| ||||||||||| ||||| ||| | |||| || | ||||| || Sbjct 1040609 ACGGTTGTTCAACGCGATCGAGACGATTCCGTGTGTCCAGAAGAAAGCAAAATGGGCACT 1040550 Query 117001 GCGCTGGATCG---------------CCGGCAG------------------AGAGGCCGC 117027 | |||||||| ||| || || ||||| Sbjct 1040549 GAACTGGATCGGAGACGACTCGACATTCGGTAGTGTACTTGTGCTGTGAATCGACGCCGC 1040490 Query 117028 CTTC------------------GGCGA-GCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCG 117068 | || |||| || || ||||| ||||| || ||||| ||| Sbjct 1040489 CATCAACTGACAGATGCTTCCTAGCGATCCGGCTTGTGGCGTTCGCAGCAGTCGAAGGCA 1040430 Query 117069 TCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCG 117128 | ||||| || ||| | | || || ||||| || || || || || |||| || Sbjct 1040429 TTTTCTTCAGCGGATCGTTCTGCTCGATTTTCTGGCTGAAAAAGCGGGGGCTTATGCACG 1040370 Query 117129 GCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCT 117188 | || | |||||||| ||||| || || | ||||| || ||||||||||| ||||||| Sbjct 1040369 GGTTGTCGTTCAGCAATGAGCTTATATCTCGCGACGAAGGGCTGCATTGCGATTTTGCCT 1040310 Query 117189 GTTTGCTGT 117197 ||||||||| Sbjct 1040309 GTTTGCTGT 1040301 Score = 104 bits (114), Expect = 2e-17 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| ||||| |||||||| ||||||||| | |||||||| | | | | Sbjct 1041025 GAGCCCATGCTGATGGAGAACCCGAACCGGTTCGTCCTCTTCCCCATCGAGCATTCATCC 1040966 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 | ||| |||||||| || | || ||||||||||||| || ||| | |||||| Sbjct 1040965 GTTTGGGAGATGTACAAGAAACATGTCGCATCGTTCTGGACCGCGGAAGAGATTGACCTG 1040906 Query 116696 TC-CAAGGACACGAGCGACTGGGAG-CGCTTGAACGACAACGAGCGCCATTTCATCAAGC 116753 || |||| ||| || || |||| | ||||| ||||| ||||| | |||||||||||| Sbjct 1040905 TCGCAAGATCACAAG-GATTGGGCGGCGCTT-AACGATGACGAGAGACATTTCATCAAGA 1040848 Query 116754 ACGTGCTGGCCTTTTTCGCCGCCAG 116778 |||| |||||||| || ||||| || Sbjct 1040847 ACGTCCTGGCCTTCTTTGCCGCAAG 1040823 >seq45 Length=544478 Score = 109 bits (120), Expect = 6e-19 Identities = 123/158 (78%), Gaps = 10/158 (6%) Strand=Plus/Minus Query 139361 GGCCTGCCGCGCGGCCTGCACGGCTTCCACGTGCACGAGTTCGGCGACGCGA-GCAACGG 139419 || ||| ||| ||||| ||||||||||||||| || ||| ||||||| ||| |||| || Sbjct 517870 GGGCTGACGCCCGGCCAGCACGGCTTCCACGTCCATGAGCACGGCGACACGACGCAA-GG 517812 Query 139420 GTGCACGTCGGCCGGCGAGCACTTCAACCCCGCGCGCCGGGAC-CACGGCGCGC---CCG 139475 |||| | ||| |||||| ||||| ||| ||| || | ||| || ||||||| ||| Sbjct 517811 GTGCGCATCGACCGGCGGGCACTACAA-TCCGTTCGGCAAGACGCATGGCGCGCCCGCCG 517753 Query 139476 ACGCCGAGATCAGGCACGTCGGCGACCTGGGCAACCTC 139513 || ||||| |||||||||||||||| |||||| || Sbjct 517752 ACACCGAG---CGGCACGTCGGCGACCTTGGCAACATC 517718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515214904359920