Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq45 89.7 4e-13 >seq45 Length=544478 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/152 (75%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTG 21197 || |||||| || ||||||||||||||||| | | || |||| ||||| || | | | Sbjct 517718 GATGTTGCCAAGGTCGCCGACGTGCCGCTCGGTGTCGGCGGGCGCGCCATGCGTCTTG-C 517776 Query 21198 CGTA-GGGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGC-TGGTGTCGCCGAACTCG 21255 || | || || ||||| |||||| || | ||| || |||| | ||||||||| ||| Sbjct 517777 CGAACGGATTGTAGTGCCCGCCGGTCGATGCGCA-CCCTTGCGTCGTGTCGCCGTGCTCA 517835 Query 21256 TGAACGTGAAAGCCGTGCAGTCCGCGCGGCAG 21287 || ||||| ||||||||| | ||| ||| ||| Sbjct 517836 TGGACGTGGAAGCCGTGCTGGCCGGGCGTCAG 517867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414569429911798