Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq67 167 2e-36 seq334 134 1e-26 seq179 125 7e-24 seq634 122 8e-23 >seq67 Length=308067 Score = 167 bits (184), Expect = 2e-36 Identities = 346/502 (69%), Gaps = 25/502 (5%) Strand=Plus/Minus Query 146049 AGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCAC 146105 |||||||||||||||||||||| | || ||||||| || || || ||||| ||| | Sbjct 207899 AGATGTCCGCGTGCCACGGTTCCAGGTACACGGCGAACGCGCCCTTGCGTTTCCCGCCGC 207840 Query 146106 CCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGG 146165 ||||||| |||| || | ||| | || ||||| | |||||| ||| |||| | | Sbjct 207839 CCTGGTCGACGTAGCGGGCAGTGTCGGAGAACACGCGAAGCATGGGGACGATGCCGTTCG 207780 Query 146166 CTACGCCGTTCGTA----GAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTC 146221 |||||||||| || | || || |||| || ||||||| || || | Sbjct 207779 ACGTGCCGTTCGTACCACGAATGTA----GGAGCCGGTGGCGCGCACGTTGTGCACGTGG 207724 Query 146222 ACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATG 146281 ||||| | |||||| | ||||||| || |||||| |||| ||||| ||||||||| Sbjct 207723 ACGCCAATGCCGCCGGCCGACTTGGAGATGATGGCGCATTCGCGCAGCGTGTCGTAGATG 207664 Query 146282 CCGTCAATGCTATCGCT-TCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340 || || ||| ||| | | || ||| | ||| ||||| || |||| |||| | || Sbjct 207663 CCCTCGATGGAGTCGTTCTTGAGCGCC-ACCAGGAAGCAGGACGACATTTGCGGGACGGG 207605 Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCC 146399 ||| || || ||||| |||||| ||||||||| || || || |||| ||| | Sbjct 207604 CGTGCCGGCGTTGAACATGGTCGGGGACGCGTGCGTGAACCACTTCTCGG-ACATGAGGT 207546 Query 146400 GATACGTTTCGATAGCGTCTTGAATGTCGTCGCC--ATGAATGCCCAAAGCGACGCGCAT 146457 ||||||| ||| || | || || || | || ||||| | ||||||||||| Sbjct 207545 TGTACGTTTGGATGGCCGCCGCGATATC--CGACTTGTGGATGCCGACGGCGACGCGCAT 207488 Query 146458 GAGCATGTGTTGGGGCCGCTCCGCCA-CTTGATTGTCAATCTTTAACAAATA--GCCGTT 146514 |||||||| || || ||||| || | |||| ||| | ||| | || || |||| Sbjct 207487 CAGCATGTGCTGTGGGCGCTCGGCGATCTTG-CCGTCGACCTTCAGCAGGTACGACCGT- 207430 Query 146515 CTCCAGGGTTTTGTATCCGAAA 146536 |||||||| ||| | |||||| Sbjct 207429 -TCCAGGGTCTTGAAGCCGAAA 207409 Score = 143 bits (158), Expect = 3e-29 Identities = 739/1159 (64%), Gaps = 40/1159 (3%) Strand=Plus/Minus Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCAT--ACGTTTGCATTTCATTT 144917 || |||||||| ||| ||| ||||||||||| ||||||| || | ||| || || | Sbjct 209137 TGGTCAATGAAGGCGCCGCGATCGGCGGCCATGTCAATCAGCGACTTCTGC--TTGATCT 209080 Query 144918 CCCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCG 144977 ||||| |||||||||||| || | | | ||| || | |||||| ||| | || Sbjct 209079 CCCAAACGGTCTTGTACAGGTCCTTGAGATCCTGCGGGATTCGGTCAATGTTCTGGACCG 209020 Query 144978 ACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGT-ACAGTTTTAACTTGATC 145036 |||| ||||| || | | || |||| ||| ||| |||| |||||| Sbjct 209019 ACCCGTTGTGTGCCATCAGCTGGTGGCGCAAGTCGT-CGTCCCACAGGCCCCGGTTGATC 208961 Query 145037 AAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAA 145096 | ||| | | | || || |||| ||| ||||| || |||| |||||| | | Sbjct 208960 AGGTCCACCAGCAGGTGCTTGTTGATGACGGTGAACTCACCAGCCAGCACACGTCTCGCG 208901 Query 145097 TACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTT 145156 || | ||| |||| | || || || ||||||| || |||||||| || ||| | Sbjct 208900 TAGATGTTGCTCGTGTACGGCTCGAAGCACTCGTTGTTCCCCAGGATCTGGCTGGTTGAC 208841 Query 145157 GCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCC 145216 || |||||||| ||| | || || ||||| |||| ||| ||| ||| || || Sbjct 208840 GCTGTGGGCATCGGCGCGAGCAGCAACGAATTCCGCATGCCATGCCGGGCGATATCGGCC 208781 Query 145217 TTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAA 145276 || |||| |||| |||||| |||| | |||| | || | |||||||||| |||| | | Sbjct 208780 TTCAGCGCGTCCCAGTCCCATCGCGACGACGGCTTTACATTCCACATGTCGAACTGGAGA 208721 Query 145277 ATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGC 145336 ||||||| | || |||||||| | || || ||| ||| | ||| || Sbjct 208720 ATGCCCTGGGACGCCGGGCTGCCAGGGAACGACTCGTAGGGGCCGTCCTTAACGGCCAGA 208661 Query 145337 TCGCAACTCGCCTCCAGAGC--GCCGAAA--TAAATTGTCTCGGCAATTTGCCTGTTGAG 145392 || || | ||| || |||| || || || |||||| || | | ||| || Sbjct 208660 TC----CTTGGAGGCAGTGCAGGCCGCAAAGTAGATCGTCTCGAAGATGTCGCGGTTCAG 208605 Query 145393 CAGCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCC 145452 ||| || ||| |||| |||| | | | || || || || || || Sbjct 208604 TGCGCGCGCCTCCGGCGAGTCGAACGGGTACCGCATCTGGATGAAGGCGTCCGCAAGGCC 208545 Query 145453 CTGTATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---AT 145509 ||| | || | |||| ||||| ||| |||||| ||| ||| | ||| | Sbjct 208544 CTGGACGCCGATTCCGACGGGCCTGTGTCGCATGTTCG--ATCGGCGC-GCTTCGGGCAC 208488 Query 145510 AGGATATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTG 145569 ||| || || | |||||| | || |||| ||| || ||| | || | || Sbjct 208487 AGGGTAATAGTTGCCGTCGATCACCTTGTTCAGGTTCAGCGTTACAGTGTACGTCACGTC 208428 Query 145570 CCGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGG--CG 145627 || ||| | ||||| ||| || |||| ||| | || | ||| | || Sbjct 208427 GTACAGCTTATGGAAGTCGAACGTGGC---GTCAGTGACGAA----CT-TGGACAGTGCG 208376 Query 145628 ATCGACGCCAAATTACAAACTGCCGTCTCCTCGGC-GTCGCTGTATTGTACGATCTCGGC 145686 |||||||||| || || || |||||||| || || | || |||| | ||||| || | Sbjct 208375 ATCGACGCCAGGTTGCAGACGGCCGTCTCGTCCGCCGACG-TGTACTCGACGATTTCCGT 208317 Query 145687 GCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGC 145746 ||||| || || | ||||| || ||||| || | ||| || || |||||||| || Sbjct 208316 GCACAGGTTACTGCTCTTGATCGTCCCCAGGTTCTTCTGGTTCGACTTGCTGTTGCAAGC 208257 Query 145747 GTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGG 145804 ||||||||| | |||||| || || || || ||||| | ||||| ||| ||| Sbjct 208256 GTCCTTGTACATCATGTAGGGCGTCCCCGTTTCGACCTGGGCCTCCAGGATCGCGAAC-- 208199 Query 145805 TGCAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTA--TTTCCTGT 145862 || ||||||||| | | | || | | |||||||| | || || ||| | Sbjct 208198 CACAGGTCCTGCGCCCTGATCGTCTTACGTTGCCGGCCCTCGTTCTCATAGCGTTC--GA 208141 Query 145863 AGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACA 145922 | ||| | | ||| || || || || | ||| ||||| || ||| || || | Sbjct 208140 ACAGCGCAGCGAACTCGTCGCCCCAGACGTCCGCCAGACCGGGCGCCTCGTTCGGGCAGA 208081 Query 145923 TCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCG 145982 || |||||| | ||| ||| | || |||| ||| |||| ||| || | ||| || Sbjct 208080 ACAACGACCAGTGGGCGTCGGCCTGCACACGCTGCATGAACAGATCGGGAATCCAAAGGC 208021 Query 145983 CGTACATCAAGTCGCGCGC 146001 |||| | || ||| || || Sbjct 208020 CGTAAAACAGGTCACGAGC 208002 >seq334 Length=1041161 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||| || | || | ||||| ||||| ||||||||||| ||| Sbjct 526883 CCACCACGAAGACGCAGAACGAGGTGAAGCGTCGATTCCTTCTGAATGTTGTAGTCGGCG 526824 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | ||||||||||||||| ||| Sbjct 526823 AGTGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGCGGG 526764 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | ||| | || ||| ||| |||| | Sbjct 526763 ATACCCTCCTTGTCCTGGATCTTCGCCTTGACCGTCTCGATCGTGTCGCCGGAGTCGACG 526704 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| | || || ||||| |||||||| Sbjct 526703 TCGAGCGTGATGGTCTTCCCGGTCAAGGTCTTCACGAAGATCTGCAT 526657 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||| || | || | ||||||||||| || || ||||| ||| Sbjct 526652 CCACCACGGAGACGCAGAACAAGGTGCAGCGTCGACTCCTTCTGGATATTGTAGTCGGCT 526593 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || ||| |||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 526592 AGCGTCCGCCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGA 526533 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | ||| | || || | |||| | Sbjct 526532 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACGGTCTCGATCGTGTCACCGCTGTCGACG 526473 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| |||| ||| || || || || || || ||||| ||||||||| Sbjct 526472 TCGAGCGTAATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 526425 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | ||| |||||||| || |||||||| || Sbjct 527577 GCCACCACGAAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGC 527518 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| |||||||| || || |||| | |||||||||||| || || Sbjct 527517 GAGCGTGCGCCCGTCCTCCAGCTGCTTCCCCGCAAAGATCAGACGCTGCTGGTCTGGCGG 527458 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| || ||| ||||| ||| | || || || |||| Sbjct 527457 GATGCCTTCCTTGTCCTGAATCTTCGCCTTGACAGTCTCGATGGTGTCACCAGAATCGAC 527398 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || ||||| |||||||| Sbjct 527397 ATCCAGAGTGATGGTCTTCCCAGTGAGCGTCTTCACGAAGATCTGCAT 527350 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 ||||| || | || | ||||| || || || |||||||| ||| | |||||| Sbjct 527102 CGCAGGACGAGGTGAAGCGTCGATTCTTTCTGGATGTTGTAGTCGGCAAGCGTGCGCCCA 527043 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||| ||||| || |||| | |||||||||||||| ||||| || || ||| Sbjct 527042 TCCTCGAGCTGTTTGCCGGCAAAGATGAGTCGCTGCTGGTCCGGCGGGATACCCTCCTTG 526983 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||||||| ||||| ||| | || || || |||| ||| | || | Sbjct 526982 TCCTGGATTTTCGCCTTGACAGTCTCGATGGTGTCACCAGAGTCGACGTCCAGCGTGATC 526923 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || || || || ||||| |||||||| Sbjct 526922 GTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 526888 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||| ||| || ||||| |||||| |||||||| || Sbjct 945212 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTACCA 945153 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | |||||| |||||||| || || || || ||||| ||| || |||| Sbjct 945152 GCAAAGATCAGACGCTGTTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 945093 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | ||| | || || | ||| | | |||| || | || || ||||| || || Sbjct 945092 ACGGCCTCGATCGTGTCCGACGACGCCACATCGAGTGTGATCGTCTTGCCGGTAAGCGTC 945033 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| || ||||| Sbjct 945032 TTGACGAATATTTGCAT 945016 >seq179 Length=351413 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || | ||| | ||||||||||| || |||||||| ||| Sbjct 22452 CCACCACGCAGACGCAGGACGAGATGCAGTGTCGACTCCTTCTGGATGTTGTAGTCGGCG 22511 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| ||| Sbjct 22512 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGG 22571 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||| | | ||| | |||||| | || | | Sbjct 22572 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACCGTCTCGATCGTATCGCCGCTGTCCACG 22631 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || || || || || ||||| |||||||| Sbjct 22632 TCCAGTGTAATCGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 22678 Score = 118 bits (130), Expect = 1e-21 Identities = 170/236 (72%), Gaps = 18/236 (8%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || | ||| | ||||||||||| || |||||||| ||| Sbjct 22683 CCACCACGCAGACGCAGAACGAGATGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 22742 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | |||||| |||||||| || Sbjct 22743 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCCGGGGGA 22802 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCG---GTG------ 131178 || || || ||||| ||| | |||| || || |||||| ||| ||| Sbjct 22803 ATACCCTCCTTGTC-CTGAAT-----CTTG-GC--CTTCACAGTTTCGATCGTGTCACCC 22853 Query 131179 GACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || |||| ||| | |||| ||| || || || || || || ||||| |||||||| Sbjct 22854 GAGTCGACGTCAAGCGTAATGGTCTTCCCTGTCAGCGTCTTGACGAAGATCTGCAT 22909 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||||| || | ||| | ||||||||||| || |||||||| ||| Sbjct 23145 CCGCCACGCAGTCGCAGAACGAGATGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 23204 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 23205 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGA 23264 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| || || ||| | | || | || || || |||| | Sbjct 23265 ATACCCTCTTTGTCCTGAATCTTGGCCTTCACCGTTTCGATTGTGTCACCCGAGTCGACG 23324 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || || || || || || ||||| |||||||| Sbjct 23325 TCAAGCGTAATGGTCTTTCCTGTCAGCGTCTTGACGAAGATCTGCAT 23371 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || || || | ||||||||||| || |||||||||||| | Sbjct 22914 CCACCACGCAGACGCAGGACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAATCGGCC 22973 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| | ||||||||| ||| |||| | |||||| || || |||||| Sbjct 22974 AAGGTTCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGTTGATCAGGAGGG 23033 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||| | | ||| | || ||| || |||| Sbjct 23034 ATACCCTCCTTATCCTGAATCTTGGCCTTCACCGTCTCGATCGTGTCGCCTGAGTCGACA 23093 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || ||||| |||||||| Sbjct 23094 TCCAATGTGATGGTCTTCCCTGTCAGCGTCTTGACGAAGATCTGCAT 23140 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| |||||| || | ||| | ||||||||||| ||||||||||| || | Sbjct 23607 CCGCCACGCAGACGCAGGACGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCCGCC 23666 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| || |||| | |||||||||||| || ||| Sbjct 23667 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCAGGCGGG 23726 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||| | | ||| | || ||| | || | Sbjct 23727 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACCGTCTCGATCGTGTCGCCGCTGTCCACA 23786 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || || || || || ||||| |||||||| Sbjct 23787 TCCAGCGTAATCGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 23833 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || | ||| | ||||||||||| || |||||||| ||| Sbjct 23376 CCACCACGCAGACGCAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 23435 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || || | || | |||||| || || |||||| Sbjct 23436 AGGGTGCGACCATCCTCCAGCTGCTTTCCGGCAAAAATCAGACGCTGTTGATCAGGAGGG 23495 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| | | || |||| | ||| | || ||| || |||| Sbjct 23496 ATGCCCTCCTTGTC-CTGAATCTTGGCTTTGACCGTCTCGATCGTGTCGCCTGAGTCGAC 23554 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || ||||| |||||||| Sbjct 23555 ATCCAATGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 23602 >seq634 Length=872753 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 526655 CCACCACGCAGACGGAGGACGAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGGCG 526714 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | |||||| ||||||||||| Sbjct 526715 AGCGTGCGCCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCCGGAGGA 526774 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| ||| | || ||| || |||| Sbjct 526775 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGGTCTCGATCGTGTCGCCCGAGTCGACA 526834 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || ||||| || || || || ||||| |||||||| Sbjct 526835 TCGAGCGTGATCGTCTTACCCGTCAGGGTCTTCACGAAGATCTGCAT 526881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008864593280