Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq179 98.7 4e-15 >seq179 Length=351413 Score = 98.7 bits (108), Expect = 4e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| || || || || || | ||||| || ||| Sbjct 23140 ATGCAGATCTTCGTCAAGACGCTGACAGGGAAGACCATCACATTGGATGTCGACTCAGGC 23081 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || || ||||| |||||||| || || |||||||||||| Sbjct 23080 GACACGATCGAGACGGTGAAGGCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGATCAA 23021 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || | || ||||| |||| ||||| ||||| || Sbjct 23020 CAGCGTCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGAACCTTGGCCGATTACAAC 22961 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | ||||||||||| || Sbjct 22960 ATCCAGAAGGAGTCGACACTTCACTTGGT 22932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975701515634036