Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq112 387 2e-102 seq334 333 3e-86 seq135 316 3e-81 seq445 241 2e-58 seq2 167 3e-36 seq90 87.8 2e-12 seq634 84.2 3e-11 seq12 84.2 3e-11 >seq112 Length=1369157 Score = 387 bits (428), Expect = 2e-102 Identities = 1071/1631 (66%), Gaps = 21/1631 (1%) Strand=Plus/Plus Query 6523 GTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTA-CTTTTCATCTTCATCTT 6581 |||||| || || || ||||||||||||||||| || ||| | | | || || || | | Sbjct 1074175 GTAGTTCTCCAGGCCGTTCTTCGCCTCGACCTTCTT-GCGCAGCATCTCGTCGTCGTGCT 1074233 Query 6582 TATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTAT 6641 | ||||| || || || ||| |||| || ||||| || || | | ||||| | Sbjct 1074234 TGTACTTCTCGGCGTCGCGGATCATCGCCTCGATGTCCTCCTTGCTCAGACGGCCCTTGT 1074293 Query 6642 CATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCA 6701 | ||||| ||||||||||| | | || || | | ||| || || || || || |||| Sbjct 1074294 CGTTCGTGATCGTAATCTTCTGGCGCTTGCCGGTCGACTTGTCCTCGGCGCTGACGTTCA 1074353 Query 6702 AAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGG 6761 ||||| || ||||| | || || | || | || || || ||| | ||| || | Sbjct 1074354 GGATACCGTTGGCATCCAGGTCAAAGGTGACCTCGATCTGAGGGACACCACGCGGGGCCG 1074413 Query 6762 CTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTT 6821 || || || | | || || | || || | |||| ||| ||| | | ||| | Sbjct 1074414 GCGGGATGCCAGACAGCTCGAACTTGCCGAGCAGGTTGTTGTCCTTCGTCCGCGCACGCT 1074473 Query 6822 CACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTT 6881 | || || | || | || || | || || || || ||| |||||||| | Sbjct 1074474 CGCCCTCGAACACCTGGATCAGGACGCCGGGCTGGTTGTCGGCGTACGTCGAGAAGATCT 1074533 Query 6882 GTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCA 6941 | | ||||| | || |||||||| || | || | || ||||| | ||| || Sbjct 1074534 GCTGCTTCTTGCACGGGATCGTCGTGTTGCGTTTGATGAGCGACGTCATGACACCGCCGG 1074593 Query 6942 TAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG-TCTTGAACAGAT 7000 || |||| || || ||||| || | |||||||| || |||| ||||| | | | Sbjct 1074594 CCGTCTCGATACCGAGCGACAGCGGGGCAACGTCCAACAG---CAGGATCTTG--CTGGT 1074648 Query 7001 TCGTTCCCT----TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGC 7056 || || || || | | ||||||||| ||||| | || ||||| ||||| || Sbjct 1074649 CTCCTCGCTGGAGTCGCCGCTGAGGATGGCGGCCTGGACGGCGGCACCGTAGGCGACGGC 1074708 Query 7057 CTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTG 7116 |||||| ||||| |||| || | | || || ||| || | | | | || | Sbjct 1074709 CTCATCCGGGTTGATCGACTTGCACGGCTCCTTGCCGCCGAAGAACTGCTTGATCAGCTC 1074768 Query 7117 TTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT-T 7175 || | || ||||| || ||||| || ||||||| |||||||| | | | ||| | | Sbjct 1074769 CTGGACCTTGGGGATACGCGTCGAGCCGCCGACCAGGACGATTTCGTGGA-TGTCGCTCT 1074827 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGT 7235 | || ||| | ||| || || || ||||| || || | ||||| ||| Sbjct 1074828 TGGAGAACTTGGCGTCGCGCAGGACCTTCTCGACCGGGATCAGCGTGTCCCGGAAGTAGT 1074887 Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295 | |||||| |||| ||||| || || || || | | | ||| || | ||||||| Sbjct 1074888 CGCCACACAGGGCCTCGAAACGCGCGCGCGTGATCGTCGAGTTGAAGTCGATGCCGTCGA 1074947 Query 7296 ATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCT 7355 | ||| || || || | || | || | || ||| || | ||||||||| || |||| Sbjct 1074948 GCAGCGAGTCGATCTCGACGGACGCCTGCGTCGACGACGACAGCGTTCGCTTGGCACGCT 1075007 Query 7356 CACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTT 7415 | || |||||| | ||||| ||||| || ||| || | || || ||||| || | Sbjct 1075008 CGCATTGCGTTCGCAGGCGACGCAGGGCGCGGTTGTTGCCCGTGATGTCCTTCTTGTGCT 1075067 Query 7416 TACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCA 7475 | || || ||||| || | |||||| | | ||| | ||||| || || ||||| | Sbjct 1075068 TGCGCTTGAACTCCTCGGCGAAGTGCTGGACGAGGCGGTTGTCGAAGTCCTCGCCACCGA 1075127 Query 7476 AGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACG 7535 ||| || || || ||||| || ||||| || ||||| || | || || | | | | Sbjct 1075128 GGTGGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATGCCGTCCTCGATCGTCAGGACGG 1075187 Query 7536 AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTT--T 7593 | ||||| |||||||||||||||||||| || || || |||||| ||| || || Sbjct 1075188 AGACATCGAACGTACCACCACCCAGGTCGAAGATCAGGACGTTC--ATCTCCGATTTGGA 1075245 Query 7594 GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653 |||||| ||||| ||||| ||||| || || || || || || || || ||||| || Sbjct 1075246 GTTCTTGTCGAGGCCGTAGGCGATGGCGGCGGCGGTCGGCTCGTTGATGATACGGAGGAC 1075305 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||||||||| ||||| | | || || |||||||| || || ||||| ||||| ||||| Sbjct 1075306 GTTCAGGCCGGCAATCATACCAGCGTCCTTCGTCGCCTGACGCTGCGAGTCGTTGAAGTA 1075365 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 ||| ||||| || | ||| |||| |||| | ||||| |||| || || | || Sbjct 1075366 GGCGGGGACGGTGATGACGGCGTTGTTGACGGATTCGCCGAGGTACGCCTCGGCCGTCTC 1075425 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 |||| ||| | || ||||| || || ||||| || | ||| ||| || || Sbjct 1075426 CCTCATCTTGATGAGGACCATGGACGAGATCTCCTCCGGGTAGAACGTGCACGTGTCGCC 1075485 Query 7834 GTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCA 7893 || | | || |||| || || | | || ||| | ||| ||| Sbjct 1075486 CTTGTACTGGACCTCAAAAGCCGGGCGGTCGCCCTCCTTCTTGACGACCGTGAACGGCCA 1075545 Query 7894 ATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGC 7953 ||||| ||| | || || |||| || ||||| | ||||| || ||||| || Sbjct 1075546 CAGCTTCATGTCGGCCTGAACGATCGGGTCGGAGAACTTGCGGCCGATCAGGCGCTTGGC 1075605 Query 7954 ATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAG 8013 ||| || ||||| | ||||| ||| | |||||||| || || || || || || Sbjct 1075606 ATCGTGGACCGTGTTCTCCGGGTTTCGGGCGGCCTGGTTCTTGGCGGCCTCACCAATGAG 1075665 Query 8014 ACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTT 8073 ||| || | || || || ||||||||||| || ||||| || || || |||||||| Sbjct 1075666 ACGCTC---GGTCTCGGTGAAGGCGACGTACGACGGCGTCGTGCGGTTGCCCTGGTCGTT 1075722 Query 8074 CGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAA 8133 ||||| || || ||| || ||| | |||| ||||||||||| ||||| || || | Sbjct 1075723 GGCAATGATCTCCACGGCGTTGTTCTTCCAGCATCCGACGCACGAGTACGTCGTGCCGAG 1075782 Query 8134 ATCAATACCGA 8144 || ||||||| Sbjct 1075783 GTCGATACCGA 1075793 >seq334 Length=1041161 Score = 333 bits (368), Expect = 3e-86 Identities = 1071/1642 (65%), Gaps = 49/1642 (3%) Strand=Plus/Minus Query 6539 TTCTTCGCCTCGACCTTTTTCGCGTACTTT-----TCATCTTCATCTTTATACTTTTCCG 6593 |||||||||||||| |||| || | || || ||| | || ||||| || | Sbjct 86302 TTCTTCGCCTCGAC-----ACGCGCCCTGTGGGCGTCGTCGTCAGCCTTGTACTTCTCGG 86248 Query 6594 CATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCG 6653 | || | |||||||| || ||||| | || || | | | |||||| || || || | Sbjct 86247 CCTCCCGAACCATCTTCTCGATGTCGGCGTTGGACAGGCGCGACTTATCGTTGGTGATGG 86188 Query 6654 TAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTG 6713 | ||||| | || || || | | ||| || || || || ||||||| || || || | Sbjct 86187 TGATCTTGTGCGACTTGCCGGTCGACTTGTCCTCGGCGCTGACATTCAGGATGCCGTTGG 86128 Query 6714 CATCAACATCGAACCTTACATTAATTTGTGGTGTACC-CCTCGGTGCGGCTGGAATACCC 6772 | || | |||||| | || | || || || ||| | | | | |||| || || ||| Sbjct 86127 CGTCGAGGTCGAACGTGACCTCGATCTGGGGCACACCACGTGGCTTCGGC-GGGATGCCC 86069 Query 6773 GTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAG 6832 || | | || | || || | |||| ||| ||| | | || || ||||| || Sbjct 86068 GTCAGCTGGAACTTGCCCAGCAGGTTGTTGTCCCTCGTCCGCGATCGCTCTCCTTCGAAG 86009 Query 6833 ACTTTAATTGTC-ACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTT 6891 || | || |||| ||||| || ||||| || ||| |||||| | || ||||| Sbjct 86008 ACCTGAA-TGTCGACCGCGGGCTGATTGTCGGCGTACGTCGAGAAGGTCTGCGTCTTCTT 85950 Query 6892 AGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAG 6951 | || | || || || ||||| || | || ||||| | || || || || | Sbjct 85949 GCACGGGACGGTGGTGTTCCTCGGGATCAGCGTCGTCATGACGCCGCCGGCCGTCTCAAT 85890 Query 6952 TCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC-TTGAACAGATTCGTTCCCTT 7010 || || ||||| || | |||||||| || | |||||| || | || |||| || | Sbjct 85889 GCCCAGCGACAGCGGCGCCACGTCCAGCAGGAGCAGGTCGTTCGCCTGACCCGTTGCCGT 85830 Query 7011 CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAA 7070 ||||| | |||||| || ||||| | ||||||| |||| |||||||| || ||||| | Sbjct 85829 -TCCCGTCAGGATGGCCGCCTGGACAGCCGCCCCGAATGCCACCGCCTCGTCCGGGTTGA 85771 Query 7071 TCGTTTTATTC-AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 ||| | | || || || ||| ||| || ||| | ||| || || || ||| Sbjct 85770 TCGACTGGCACAAGGTC-TTCCCGCCAAAGTACGACGACAGCATGGCCTGGATCTTGGGG 85712 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || ||||| || ||||||| || | || | || | ||| || ||| ||| Sbjct 85711 ATCCGCGTCGACCCGCCGACCAGGACCACCTCGTCGACCTGCGACTTGCTGATGCCCGAG 85652 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || | || || || ||| || || ||||| |||| ||||| || Sbjct 85651 TCCTTCAGCACCTGGTCCACCGGGCCCAGGCACTTGTCGAACAGGTCCTGGCACAGCGCC 85592 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || || || || || | | ||| || | ||||||| |||||||| | | Sbjct 85591 TCGAATCGCGCCCGAGTGATCGTCGAGCTGAAGTCGGCCCCGTCGTGCAACGAATCGACT 85532 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || || || | || | || ||| || | | || || || |||||| |||||| Sbjct 85531 TCGATCGTGGCCTGCGTCGACGACGACAGGGCGCGTTTCGCCTTCTCACATTGCGTTCGC 85472 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATC-TTTCTTATGT--TTACGTTTAAAC 7426 | |||||||| || ||| |||| |||| | || | || || ||||| || Sbjct 85471 AGGCGACGAAGAGCGCGCTGGTTGCCGGTCAGGTCGGCGCCGCGGTTCTTGCGTTTGAAT 85412 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTC--TCGAATCGAAATCTTCACCACCCAAGTGTGTAT 7484 || || |||||| | | ||| | ||| ||||| || || || |||| ||| || | Sbjct 85411 TCGTCCACGAAGTGCTGCACGAGGCGGTCG--TCGAAGTCCTCGCCGCCCAGGTGCGTGT 85354 Query 7485 CCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAA 7544 || || || || || ||||| |||| || || || || | | |||||| || || | Sbjct 85353 TGCCGGCCGTGGCCTTCACTTCGAAGACGCCGCCGTCCATCGTCAGCAACGACACGTCGA 85294 Query 7545 ACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC-GTCT------------ 7591 |||| || || |||||||| || || || ||||| ||| | |||| Sbjct 85293 ACGTGCCGCCGCCCAGGTCGAAGATCAGGACGTTGTGCTCGCCGGTCTGGCGGGACCCGG 85234 Query 7592 --TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 ||| ||| || || ||||| ||||| ||||| ||||| || || || || ||||| | Sbjct 85233 GGTTGCCCTTGTCCAGGCCGTAGGCGATGGCCGCTGCCGTCGGCTCGTTGATGATACGGA 85174 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTA 7708 | ||| ||||||||||| | ||| || || ||||| || || || || | ||||| Sbjct 85173 GGACGTTGAGGCCAGCAAT-GCGGCCGGCGTCCTTCGTGGCCTGCCGCTGAGCGTCGTTG 85115 Query 7709 AAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCG 7768 |||||||||||| || | ||| || || ||||| | || || |||| || || Sbjct 85114 AAGTAGGCCGGGCAGGTGATGACAGCATCGGTGACGGGTTGGCCCAGGTACGCCTCTGCC 85055 Query 7769 ATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTT 7828 | || ||||| ||||| || |||||||| || ||||| || | | ||| | ||||| Sbjct 85054 GTCTCCTTCATCTTGGTCAGGACCATCGACGAGATCTCCTCCGGCTTGAACAGCTTCGTC 84995 Query 7829 TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATAC 7888 | || | || || | || | || | ||| | || || ||| || Sbjct 84994 TGGCCCTGGTGCTCGACCTTGATGACTGGGCGCCCAGCATCGCCTTCGACAACGGCGAAC 84935 Query 7889 GACCA-ATCTTTCATATCGTCTTGGACCTGT-TGGTCCGAAAACTTTCTTCCGATAAGAC 7946 | ||| | ||| | || || || | || |||| | ||||| | ||||| |||| Sbjct 84934 GGCCACAGCTTGCGATCCGACT--GAACGGTCGGGTCGGCGAACTTGCGACCGATCAGAC 84877 Query 7947 GCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCC 8006 |||| ||||| || | ||||| | |||||| || | |||||||| || ||||| | Sbjct 84876 GCTTGGCATCGAAGATCGTGTTGGTCGGGTTCCGAGCCGCCTGGTTCTTGGCGGCGTCGC 84817 Query 8007 CGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTT 8066 |||| || ||||| | || || ||||| || | || || || || || || |||| Sbjct 84816 CGATCAGGCGTTC---GGTGTCAGTGAACGCCACCCAGGACGGCGTTGTGCGGTTGCCTT 84760 Query 8067 GGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTG 8126 ||||||| || || || || |||| |||| | ||||||||| || || |||||||| | Sbjct 84759 GGTCGTTGGCGATGATCTCAACGCTCCCGTTCTTCCAGACGCCAACACAGGAATACGTCG 84700 Query 8127 TTCCTAAATCAATACCGATTGC 8148 |||| | || |||||||| || Sbjct 84699 TTCCCAGGTCGATACCGATAGC 84678 >seq135 Length=386367 Score = 316 bits (350), Expect = 3e-81 Identities = 1063/1640 (65%), Gaps = 45/1640 (3%) Strand=Plus/Minus Query 6539 TTCTTCGCCTCGACCTTTTTCGCGTACTTT-----TCATCTTCATCTTTATACTTTTCCG 6593 |||||||||||||| |||| || | || || ||| | || ||||| || | Sbjct 9253 TTCTTCGCCTCGAC-----ACGCGCCCTGTGGGCGTCGTCGTCAGCCTTGTACTTCTCGG 9199 Query 6594 CATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCG 6653 | || | |||||||| || ||||| | || || | | | ||| || || || || | Sbjct 9198 CCTCCCGAACCATCTTCTCGATGTCGGCGTTGGACAGGCGCGACTTGTCGTTGGTGATGG 9139 Query 6654 TAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTG 6713 | ||||| | || || || | | ||| || || || || ||||||| || || || | Sbjct 9138 TGATCTTGTGCGACTTGCCGGTCGACTTGTCCTCGGCGCTGACATTCAGGATGCCGTTGG 9079 Query 6714 CATCAACATCGAACCTTACATTAATTTGTGGTGTACC-CCTCGGTGCGGCTGGAATACCC 6772 | || | |||||| | || | || || || ||| | | | | |||| | || ||| Sbjct 9078 CGTCGAGGTCGAACGTGACCTCGATCTGGGGCACACCACGTGGCTTCGGC-GCGATGCCC 9020 Query 6773 GTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAG 6832 || | | || | || || | | |||| ||| ||| | | || || ||||| || Sbjct 9019 GTCAGCTGGAACTTGCCCAGCAGATTGTTGTCCCTCGTCCGCGATCGCTCTCCTTCGAAG 8960 Query 6833 ACTTTAATTGTC-ACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTT 6891 || | || |||| ||||| || ||||| || ||| |||||| | || ||||| Sbjct 8959 ACCTGAA-TGTCGACCGCGGGCTGATTGTCGGCGTACGTCGAGAAGGTCTGCGTCTTCTT 8901 Query 6892 AGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAG 6951 | || | || || || ||||| || | || ||||| | || || || || | Sbjct 8900 GCACGGGACGGTGGTGTTCCTCGGGATCAGCGTCGTCATGACGCCGCCGGCCGTCTCAAT 8841 Query 6952 TCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC-TTGAACAGATTCGTTCCCTT 7010 || || ||||| || | |||||||| | | |||||| || | || |||| || | Sbjct 8840 GCCCAGCGACAGCGGCGCCACGTCCAGCAAGAGCAGGTCGTTCGCCTGACCCGTTGCCGT 8781 Query 7011 CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAA 7070 ||||| | |||||| || ||||| | ||||||| |||| |||||||| || ||||| | Sbjct 8780 -TCCCGTCAGGATGGCCGCCTGGACGGCCGCCCCGAATGCCACCGCCTCGTCCGGGTTGA 8722 Query 7071 TCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGA 7130 ||| | || || ||| ||| || ||| | ||| || || || |||| Sbjct 8721 TCGACTGGCACAACGTCTTCCCGCCAAAGTACGACGACAGCATGGCCTGGATCTTGGGGA 8662 Query 7131 TTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGT 7190 | || ||||| || ||||||| || | || | || | ||| || ||| |||| Sbjct 8661 TCCGCGTCGACCCGCCGACCAGGACCACCTCGTCGACCTGCGACTTGCTGATGCCCGAGT 8602 Query 7191 CTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCT 7250 | || | || || || ||| || || ||||| |||| ||||| ||| Sbjct 8601 CCTTCAGCACCTGGTCCACCGGGCCCAGGCACTTGTCGAACAGGTCCTGGCACAGCGCCT 8542 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || || || || || | | ||| || ||||||||| |||||||| | || Sbjct 8541 CGAATCGCGCCCGAGTGATCGTCGAGCTGAAGTCGGCGCCGTCGTGCAACGAATCGACTT 8482 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | || || | || | || ||| || | | || || || |||||| |||||| | Sbjct 8481 CGATCGTGGCCTGCGTCGACGACGACAGGGCGCGTTTCGCCTTCTCACATTGCGTTCGCA 8422 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATC-TTTCTTATGT--TTACGTTTAAACT 7427 ||||||||||| ||| |||| |||| | || | || || ||||| || | Sbjct 8421 GGCGACGAAGGGCGCGCTGGTTGCCGGTCAGGTCGGCGCCGCGGTTCTTGCGTTTGAATT 8362 Query 7428 CTTCAGAGAAGTGTCGAAGGAGTC--TCGAATCGAAATCTTCACCACCCAAGTGTGTATC 7485 | || |||||| | | ||| | ||| ||||| || || || |||| ||| || | Sbjct 8361 CGTCCACGAAGTGCTGCACGAGGCGGTCG--TCGAAGTCCTCGCCGCCCAGGTGCGTGTT 8304 Query 7486 CCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAA 7545 || || || || || || || |||| || || || || | | |||||| || || || Sbjct 8303 GCCGGCCGTGGCCTTCACCTCGAAGACGCCGCCGTCCATCGTCAGCAACGACACGTCGAA 8244 Query 7546 CGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC-GTCT------------- 7591 || || ||||||||||| || || || ||||| ||| | | || Sbjct 8243 GGTGCCGCCACCCAGGTCGAAGATTAGGACGTTGTGCTCGCCGGGCTGGCGGGACCCGGG 8184 Query 7592 -TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG 7650 | ||| || || ||||| ||||| ||||| |||||||| || || || |||||||| Sbjct 8183 GCCGCCCTTGTCCAGGCCGTAGGCGATGGCCGCTGCCGTTGGCTCGTTGATGATACGAAG 8124 Query 7651 ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAA 7710 ||||||||||||||| | || || ||||| || || || || | ||||| || Sbjct 8123 GACGTTCAGGCCAGCAATGCGACCGGCGTCCTTCGTGGCCTGCCGCTGAGCGTCGTTGAA 8064 Query 7711 GTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGAT 7770 |||||||||| || | ||| || || ||||| | || || |||| ||||| | Sbjct 8063 GTAGGCCGGGCAGGTGATGACAGCATCGGTGACGGGTTGGCCCAGGTACGCCTCCGCCGT 8004 Query 7771 ATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTC 7830 || ||||| ||||| || |||||||| || ||||| || | | ||| | ||||| | Sbjct 8003 CTCCTTCATCTTGGTCAGGACCATCGACGAGATCTCCTCCGGCTTGAACAGCTTCGTCTG 7944 Query 7831 ACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGA 7890 || | || || | || | || | ||| | || || ||| ||| Sbjct 7943 GCCCTGGTGCTCGACCTTGATGACTGGGCGCCCAGCATCGCCTTCGACAACGGCGAACGG 7884 Query 7891 CCA-ATCTTTCATATCGTCTTGGACCTGT-TGGTCCGAAAACTTTCTTCCGATAAGACGC 7948 ||| | ||| | || || || | || |||| | ||||| | ||||| || ||| Sbjct 7883 CCACAGCTTCCGATCCGACT--GAACGGTCGGGTCGGCGAACTTGCGACCGATCAGGCGC 7826 Query 7949 TTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCG 8008 || ||||| || | ||||| | |||||| || | |||||||| || ||||| ||| Sbjct 7825 TTGGCATCGAAGATCGTGTTGGTCGGGTTCCGAGCCGCCTGGTTCTTGGCGGCGTCGCCG 7766 Query 8009 ATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGG 8068 || || ||||| | || || ||||| || | || || || || || || |||||| Sbjct 7765 ATCAGGCGTTC---GGTGTCAGTGAACGCCACCCAGGACGGTGTTGTGCGGTTGCCTTGG 7709 Query 8069 TCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTT 8128 ||||| || || || || |||| |||| | ||||||||| || || ||||| || ||| Sbjct 7708 TCGTTGGCGATGATCTCAACGCTCCCGTTCTTCCAGACGCCAACACAGGAATATGTCGTT 7649 Query 8129 CCTAAATCAATACCGATTGC 8148 || | || |||||||| || Sbjct 7648 CCCAGGTCGATACCGATAGC 7629 >seq445 Length=975283 Score = 241 bits (266), Expect = 2e-58 Identities = 861/1335 (64%), Gaps = 16/1335 (1%) Strand=Plus/Minus Query 6818 CGTTCACCTTCATAGACTTTAATTGTC-ACCGCAGGTTGATTATCTTGTGCCGTTGAGAA 6876 ||||| || || ||||| | || ||| ||||||| || || || ||| ||||| Sbjct 650933 CGTTCGCCCTCGTAGACCTGGAT-GTCGACCGCAGACTGGTTGTCAGCGTACGTCGAGAA 650875 Query 6877 GATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACC 6936 | || ||||| | || | |||||| || | | || | || ||||| || || Sbjct 650874 CGTCTGCGTCTTCTTGCACGGCACCGTCGTGTTCCGCTTGATCAGTGGCGTCATGATGCC 650815 Query 6937 ACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAAC 6996 || || || || || | ||||| |||| |||||||| || ||||| | || | Sbjct 650814 GCCGGCCGTCTCCAGGCCCAACGACAGCGGTGCCACGTCCAGCAGCAACAGCTTCTGCGC 650755 Query 6997 AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGC 7056 |||| | ||||| | ||||||||| ||||| | || || || |||||||| Sbjct 650754 CTTCTCGTCGGCGGTTCCCGTCAGGATGGCGGCCTGGACGGCGGCGCCATACGCGACCGC 650695 Query 7057 CTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTG 7116 ||| || ||||| |||| | ||| || ||| ||| | | ||| | ||| || Sbjct 650694 CTCGTCCGGGTTGATCGACTGGCACAGCGTCTTCCCGCCAAAGAAGTTCGACAGCATCTG 650635 Query 7117 TTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTT 7176 || | ||||| || ||||| || ||||||| ||||| || | | | || || Sbjct 650634 CTGGACGCGGGGGATGCGGGTCGACCCGCCGACCAGGACGATCTCCTCGATCTGCGTCTT 650575 Query 7177 ATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTC 7236 || ||||| || || | ||||| || ||| || ||||| ||| Sbjct 650574 GCTTATGCCCGAGTCGCGGAGGACCTGCTCGACCGGCGCCAGGCACGACTCGAACAGGTC 650515 Query 7237 CATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTA 7296 |||||| |||| || || || || || || || | ||| || | ||| ||||| Sbjct 650514 GTGACACAGCGCCTCGAAGCGCGCCCGCGTGATCGACGAGCTGAAGTCGATGCCTTCGTA 650455 Query 7297 TAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTC 7356 | ||| || | || | || | ||| | || ||| || | | ||||| ||||| || Sbjct 650454 CAGCGAGTCCACCTCGACGGCCGCTTGCGTCGACGACGACAGGGCGCGCTTGGCGCGTTC 650395 Query 7357 ACACGCCGTTCGTAAACGACGAAGGGCACGCGGG--TTACCGGAAAT-ATCTTTCTTATG 7413 || |||||||||| || || ||||| || | || | || | | | | | | Sbjct 650394 GCAGGCCGTTCGTAGGCGGCGCAGGGCGCGTTGCGATTTCGTGATGTCAACGCCCCTGTT 650335 Query 7414 TTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAATCGAAATCTTCACC 7470 || ||||| ||||| || ||||| | || ||||| | ||||| || || || Sbjct 650334 CTTGCGTTTGAACTCGTCGACAAAGTGCTTGACGAGGAGGTTG---TCGAAGTCCTCGCC 650278 Query 7471 ACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAA 7530 || | || || | || || || || ||||| || |||| || || || || | | Sbjct 650277 GCCGAGATGCGTGTTGCCGGCCGTGGCCTTGACCTCGAAGACGCCGCCCTCGATCGTCAG 650218 Query 7531 CAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT-CGT 7589 || ||| || || ||||| || || || ||||| || || || ||||| ||| || Sbjct 650217 CAGCGACACGTCGAACGTGCCGCCGCCGAGGTCGAAGATCAGGACGTTGTGCTCGCGCGA 650158 Query 7590 CTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 || | ||| ||||| ||||| ||||| || || || || || || || || ||||||| Sbjct 650157 CTCC-TCCTTGTCGAGGCCGTAGGCGATGGCGGCTGCGGTCGGCTCGTTGATGATACGAA 650099 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 | ||||||||| | || | || || ||||||| | ||||||||| ||||| | Sbjct 650098 GGACGTTCAGGCCGGAGATCCGCCCAGCGTCCTTCGTCGAATTTCGTTGCGAGTCGTTGA 650039 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769 ||||||| ||| || | || ||||| |||| | ||||| ||| ||||| Sbjct 650038 AGTAGGCGGGGCAGGTGATCACGGCGTCGTTGACCGGGTGCCCGAGGAACGCCTCCGCCG 649979 Query 7770 TATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTT 7829 | || ||||| ||||| || ||||| | || ||||| || | | ||||| ||||| | Sbjct 649978 TCTCCTTCATCTTGGTCAGGACCATGGCCGAGATCTCCTCCGGCTTGAACTGCTTCGTCT 649919 Query 7830 CACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACG 7889 || | | | || || || | || || | | | ||| ||||| ||| Sbjct 649918 GGCCCTGGTACTGGACCTCGATGACAGGCCGGTCGCCTTCGCTCCGGACGACCTTGAACG 649859 Query 7890 ACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCT 7949 ||| ||||| ||| ||||| |||| ||||| | ||||| || |||| Sbjct 649858 GCCACAGCTTCATGTCGGACTGGACGGCCGGGTCGTCGAACTTGCGGCCGATCAGGCGCT 649799 Query 7950 TTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGA 8009 | ||||| || | ||||| | |||||| |||| | |||||| |||||| ||||||| Sbjct 649798 TGGCATCGAAGATGGTGTTCTCCGGGTTCCTGGCCGCCTGGTTCAACGCCGCCTCCCCGA 649739 Query 8010 TAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGT 8069 | ||||| || | | | || ||||| || | || || || || || || ||||||| Sbjct 649738 TCAGACGCTCCTGGT---CGGTGAACGCCACCCAGGACGGCGTTGTGCGGTTGCCTTGGT 649682 Query 8070 CGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTC 8129 |||| || || || || || || | |||||||||| ||||| || || || || | Sbjct 649681 CGTTAGCGATGATGTCGACCGACCCGCTGCGCCAGACGCCCACGCAGGAGTAGGTCGTGC 649622 Query 8130 CTAAATCAATACCGA 8144 | | || || |||| Sbjct 649621 CGAGGTCGATGCCGA 649607 >seq2 Length=692430 Score = 167 bits (184), Expect = 3e-36 Identities = 239/336 (71%), Gaps = 3/336 (1%) Strand=Plus/Minus Query 7501 GACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG 7560 |||||| |||| || | ||||| | | | ||| ||||| || |||||||| || || Sbjct 167504 GACTTCGAAGACTCCGTCGTCAATAGTCAGAAGCGAGACATCGAAGGTACCACCGCCAAG 167445 Query 7561 GTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGC 7620 ||| | | || | |||| | || | | | || || ||| || ||||||||||| || Sbjct 167444 GTCGTACACCAGGATGTTCTTCTCCTTGCCCTT---CTGATCCAGGCCGTACGCGATCGC 167388 Query 7621 CGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATC 7680 || ||||| || || || || ||||| || ||||||||| || || || | ||||| Sbjct 167387 GGCGGCCGTCGGCTCGTTGATGATACGGAGGACGTTCAGGCCGGCGATCTTTCCGGCATC 167328 Query 7681 TTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGT 7740 ||||||||||| || || | ||||| |||||||| |||||||| | ||| || | | Sbjct 167327 CTTCGTCGCTTGACGCTGGGCGTCGTTGAAGTAGGCTGGGACCGTGATGACGGCCGACTT 167268 Query 7741 GACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800 ||||| | || || |||| || ||| | |||||||| ||||| || ||||||| || Sbjct 167267 GACTTCGTGGCCCAGGTACGCCTCAGCGGTTTCTTTCATCTTGGTCAGGACCATCGCGGA 167208 Query 7801 AATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTT 7836 ||||| || | ||||| | ||| | | ||||| Sbjct 167207 GATCTCCTCCGGGGCAAATTCCTTCTTCTTGCCGTT 167172 Score = 104 bits (114), Expect = 3e-17 Identities = 118/158 (75%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 ||||||||||| ||||| ||||| |||||||| | | | || |||||||||||||| Sbjct 166965 TGGTTCTTCGCGGCGTCTCCGATCAGACGTTCGGTGT---CGGTGAACGCGACGTACGAC 166909 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || || |||| || || |||||||| || | ||| || || || |||| | | || Sbjct 166908 GGCGTAATTCGGTTACCCTGGTCGTTGGCGACAATCTCGACACGCCCGTTCTTGAACACA 166849 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||||| |||||||| || ||||| | ||| || || || Sbjct 166848 CCGACACACGAATATGTCGTTCCAAGATCGATTCCAAT 166811 >seq90 Length=466713 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/75 (88%), Gaps = 7/75 (9%) Strand=Plus/Plus Query 131788 CGTGGCCGAGT-GGTCTAAGGCGCCAGATTAAGGCTCTGG-----TTCGGAAGAGCGCAG 131841 ||||||||||| |||||||||||||||||||||||||||| | |||||| |||||| Sbjct 77656 CGTGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGCTCTGGTCTTCTCCGGAAG-GCGCAG 77714 Query 131842 GTTCAAATCCTGTCG 131856 |||||||||||| || Sbjct 77715 GTTCAAATCCTGCCG 77729 >seq634 Length=872753 Score = 84.2 bits (92), Expect = 3e-11 Identities = 62/70 (89%), Gaps = 7/70 (10%) Strand=Plus/Plus Query 131790 TGGCCGAGT-GGTCTAAGGCGCCAGATTAAGGCTCTGG-----TTCGGAAGAGCGCAGGT 131843 ||||||||| |||||||||||||||||||||||||||| | |||||| |||||||| Sbjct 236624 TGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGCTCTGGTCTTCTCCGGAAG-GCGCAGGT 236682 Query 131844 TCAAATCCTG 131853 |||||||||| Sbjct 236683 TCAAATCCTG 236692 Score = 84.2 bits (92), Expect = 3e-11 Identities = 62/70 (89%), Gaps = 7/70 (10%) Strand=Plus/Plus Query 131790 TGGCCGAGT-GGTCTAAGGCGCCAGATTAAGGCTCTGG-----TTCGGAAGAGCGCAGGT 131843 ||||||||| |||||||||||||||||||||||||||| | |||||| |||||||| Sbjct 237533 TGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGCTCTGGTCTTCTCCGGAAG-GCGCAGGT 237591 Query 131844 TCAAATCCTG 131853 |||||||||| Sbjct 237592 TCAAATCCTG 237601 >seq12 Length=3558 Score = 84.2 bits (92), Expect = 3e-11 Identities = 62/70 (89%), Gaps = 7/70 (10%) Strand=Plus/Minus Query 131790 TGGCCGAGT-GGTCTAAGGCGCCAGATTAAGGCTCTGG-----TTCGGAAGAGCGCAGGT 131843 ||||||||| |||||||||||||||||||||||||||| | |||||| |||||||| Sbjct 3249 TGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGCTCTGGTCTTCTCCGGAAG-GCGCAGGT 3191 Query 131844 TCAAATCCTG 131853 |||||||||| Sbjct 3190 TCAAATCCTG 3181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635127504580280