Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq179 91.5 1e-12 >seq179 Length=351413 Score = 91.5 bits (100), Expect = 1e-12 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || || |||||||| |||||||| ||||| |||||||||||||| || || ||||| Sbjct 23447 ATCCTCCAGCTGCTTTCCGGCAAAAATCAGACGCTGTTGATCAGGAGGGATGCCCTCCTT 23506 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC-AGTGTGTGAAGTTTCAAGGGTAA 480735 ||| |||||||| |||||| | || || || || || || | | ||| || | Sbjct 23507 GTCCTGAATCTTGGCTTTGACCGTCTCGATCGTGTCGCCTGAGTCGACATCCAA-TGTGA 23565 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || ||||| ||||| || || Sbjct 23566 TGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTG 23599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268150589133716