Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq67 172 5e-38 seq179 138 1e-27 seq334 118 1e-21 seq634 111 1e-19 >seq67 Length=308067 Score = 172 bits (190), Expect = 5e-38 Identities = 374/551 (68%), Gaps = 19/551 (3%) Strand=Plus/Minus Query 139469 AACCCATGTTACGTTT--CATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAG 139526 |||||| | ||| ||| || | ||||| || || | ||| |||||||| |||||||| Sbjct 207934 AACCCAGGGTACCTTTTTCAGCTCCAGGAACTCGAAGATGTCCGCGTGCCACGGTTCCAG 207875 Query 139527 ATAGATGGCCATTGCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCGTACAGCATT 139583 || | ||| | ||||| || ||||| ||| || || ||||||| || ||| | Sbjct 207874 GTACACGGCGAACGCGCCCTTGCGTTTCCCGCCGCCCTGGTCGACGTAGCGGGCAGTGTC 207815 Query 139584 ATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG-- 139641 ||| ||||| | ||| || | | ||| ||| || ||||| || | ||| ||| Sbjct 207814 GGAGAACACGCGAAGCATGGGGACGATGCCGTTCGACGTGCCGTTCGTACCACGAATGTA 207755 Query 139642 GGA-CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGA 139700 ||| | | || || || |||| || || | || ||| || |||||| | | ||||| Sbjct 207754 GGAGCCGGTG---GCGCGCACGTTGTGCACGTGGACGCCAATGCCGCCGGCCGACTTGGA 207698 Query 139701 TATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGT 139760 || | |||| ||||| | || ||||| || || ||| ||||| || | || Sbjct 207697 GATGATGGCGCATTCGCGCAGCGTGTCGTAGATGCCCTCGATGGAGTCGTTCTTGAGCGC 207638 Query 139761 GACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACT 139820 ||||| ||||| ||||| | |||||| | ||||||||| |||| || || Sbjct 207637 CACCAGGAAGCAGGACGACATTTGCGGGACGGGCGTGCCGGCGTTGAACATGGTCGGGGA 207578 Query 139821 CGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATC 139880 ||||||||||||| | | ||||| | | |||||||| |||||| | | ||||| Sbjct 207577 CGCGTGCGTGAACCACTTCTCGGACATGAGGTTGTACGTTTGGATGGCCGCCGCGATATC 207518 Query 139881 C--CTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACC 139938 | ||| |||||| ||||| | ||| ||||||||||| || || || ||||| | | Sbjct 207517 CGACTT--GTGGATGCCGACGGCGACGCGCATCAGCATGTGCTGTGGGCGCTCGGCGATC 207460 Query 139939 GCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTAT 139996 ||| |||| || ||| || ||||| || ||||||||| |||| || || | Sbjct 207459 TTGCCGTCGACCTTCAGCAGGTACGACCGT--TCCAGGGTCTTGAAGCCGAAATAGTCAA 207402 Query 139997 AGTTGAAATCG 140007 ||| ||||||| Sbjct 207401 AGTCGAAATCG 207391 Score = 96.9 bits (106), Expect = 3e-15 Identities = 367/568 (65%), Gaps = 16/568 (3%) Strand=Plus/Minus Query 138157 TCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGTT 138216 || || || ||||| ||||| || |||| || | || ||| || ||||| ||||| Sbjct 209284 TCAACGGTGAACTTGATGGCGTCGACGGCGGGCCGAGATCGCAGGTAGTACATGCCCGTC 209225 Query 138217 TTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGTTTC 138276 || | || || ||||||||| | || ||||| || || || |||| | || Sbjct 209224 TTGAGGCCTTTAGTCCAGGCGTAGAAATGCATCGACGTCAGCTT-GCCAAAGTTAATGTC 209166 Query 138277 GC-CAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCAT 138335 | || | ||| |||||||| ||| || ||||| ||||| ||||| |||||| Sbjct 209165 GGTCATGTGGACGTTGAACGATTGCGACTGGTCAATGAAGGCGCCGCGATCGGCGGCCAT 209106 Query 138336 GTTAATTAA--ATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGT 138393 || ||| | | || | ||| |||||||| ||||||||||| || || | || Sbjct 209105 GTCAATCAGCGACTTCTGCTTG--ATCTCCCAAACGGTCTTGTACAGGTCCTTGAGATCC 209048 Query 138394 CGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATG 138453 |||| ||| |||| || || | ||||||| || || | | | | || | Sbjct 209047 TGCGGGATTCGGTCAATGTTCTGGACCGACCCGTTGTGTGCCATCAGCTGGTGGCGCAAG 208988 Query 138454 TCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGA 138513 || |||| |||| | ||||||| ||| | ||| | |||| ||||| Sbjct 208987 TCGTCGTCCCACAGGCCCCGGTTGATCAGGTCCACCAGCAGGTGCTTGTTGATGACGGTG 208928 Query 138514 AATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCG 138573 || ||||| |||| || || | |||| |||||| | ||| | ||||| || | ||| Sbjct 208927 AACTCACCAGCCAGCACACGTCTCGCGTAGATGTTGCTCGTGTACGGCTCGAAGCACTCG 208868 Query 138574 TTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTC 138633 ||||| ||||| ||||| || | ||| || ||||| ||| | || | |||||| Sbjct 208867 TTGTTCCCCAGGATCTGGCTGGTTGACGCTGTGGGCATCGGCGCGAGCAGCAACGAATTC 208808 Query 138634 CGTAAACCGTGAAGCTTGAT-TCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTA-- 138690 || | || || | ||| ||| |||| |||| |||||||| ||||| | Sbjct 208807 CGCATGCCATGCCGGGCGATATCG-GCCTTCAGCGCGTCCCAGTCCC----ATCGCGACG 208753 Query 138691 --GGTTTTTTGTTCCACATATCGTACTG 138716 || ||| |||||||| ||| |||| Sbjct 208752 ACGGCTTTACATTCCACATGTCGAACTG 208725 >seq179 Length=351413 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 ||||||||||||||| | || ||||| || || || || || || | || || || | Sbjct 23144 TACGATGCAGATCTTCGTCAAGACGCTGACAGGGAAGACCATCACATTGGATGTCGACTC 23085 Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 |||||| | || ||||| || ||||| || || || || || || ||||| || Sbjct 23084 AGGCGACACGATCGAGACGGTGAAGGCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGA 23025 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 |||||| ||| ||||||| ||||| || ||| |||||||| ||| | || | ||||| Sbjct 23024 TCAACAGCGTCTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGAACCTTGGCCGATTA 22965 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| |||||||| |||||||| |||| |||| || || Sbjct 22964 CAACATCCAGAAGGAGTCGACACTTCACTTGGTCCTGCGTCTGCGTGGTGG 22914 Score = 125 bits (138), Expect = 6e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 24697 TGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGA 24756 || ||||||||||||||| | || ||||| || || || || |||||||| || || || Sbjct 23378 TGGTACGATGCAGATCTTCGTCAAGACGCTGACAGGAAAGACCATTACGCTTGACGTCGA 23319 Query 24757 AGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCC 24816 | |||||| | |||||||| || ||||| || |||||||| || || || || Sbjct 23318 CTCGGGTGACACAATCGAAACGGTGAAGGCCAAGATTCAGGACAAAGAGGGTATTCCCCC 23259 Query 24817 CGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGA 24876 || || || ||| ||||||| ||||| || |||||||||||| | | | | | || Sbjct 23258 GGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTCGCCGA 23199 Query 24877 TTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| || ||||| ||||| | || | || ||||| |||| || || Sbjct 23198 CTACAACATCCAGAAGGAGTCGACGTTGCATCTCGTTCTGCGACTGCGTGGCGG 23145 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 ||||||||||||||| | || ||||| || || || || || || | || || || | Sbjct 23606 TACGATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACCATCACATTGGATGTCGACTC 23547 Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 |||||| | || ||||| ||| ||||| || ||||| || || || ||||| || Sbjct 23546 AGGCGACACGATCGAGACGGTCAAAGCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGA 23487 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 |||||| ||| |||| |||||||| || |||||||||||| | | | | | || || Sbjct 23486 TCAACAGCGTCTGATTTTTGCCGGAAAGCAGCTGGAGGATGGTCGCACCCTCGCCGACTA 23427 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| ||||| || || | || |||| |||| || || Sbjct 23426 CAACATCCAGAAGGAGTCGACGCTGCATCTCGTCCTGCGTCTGCGTGGTGG 23376 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||||||||||| | || || || || || || || |||||||| || || || | Sbjct 23836 ACGATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACGATTACGCTGGATGTGGACAGC 23777 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 |||||| | || ||||| || |||||||| || || || || || || || || Sbjct 23776 GGCGACACGATCGAGACGGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCGCCTGAC 23717 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || ||| ||||||||||||| || ||||||||||| | | | || | || || Sbjct 23716 CAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGGCGGACTAC 23657 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||||| || || | || |||| |||| || || Sbjct 23656 AACATTCAGAAGGAGTCGACGCTGCATCTCGTCCTGCGTCTGCGTGGCGG 23607 Score = 111 bits (122), Expect = 1e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 24697 TGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGA 24756 || ||||||||||||||| | || ||||| || || || || ||||| || || || || Sbjct 22685 TGGTACGATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACGATTACACTGGACGTGGA 22626 Query 24757 AGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCC 24816 | ||| || | || ||||| || |||||||| || || || || || || || Sbjct 22625 CAGCGGCGATACGATCGAGACGGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCGCC 22566 Query 24817 CGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGA 24876 || || || ||| ||||||| ||||| || |||||||||||| | | | | | || Sbjct 22565 GGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTCGCCGA 22506 Query 24877 TTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| || ||||| |||||||| || | || |||| |||| || || Sbjct 22505 CTACAACATCCAGAAGGAGTCGACACTGCATCTCGTCCTGCGTCTGCGTGGTGG 22452 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24697 TGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGA 24756 || ||||||||||||||| | || ||||| || || || || |||||||| || || || Sbjct 22916 TGGTACGATGCAGATCTTCGTCAAGACGCTGACAGGGAAGACCATTACGCTTGACGTCGA 22857 Query 24757 AGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCC 24816 | ||||| | ||||| || || ||||| || ||||| || || || || || Sbjct 22856 CTCGGGTGACACGATCGAAACTGTGAAGGCCAAGATTCAGGACAAGGAGGGTATTCCCCC 22797 Query 24817 CGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGA 24876 || ||||| ||| ||||||| ||||| || |||||||||||| | | | | | || Sbjct 22796 GGACCAACAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTCGCCGA 22737 Query 24877 TTATAACATTCAAAAGGAATCGAC 24900 || ||||| || ||||| ||||| Sbjct 22736 CTACAACATCCAGAAGGAGTCGAC 22713 >seq334 Length=1041161 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||||||||||| | || || | ||||| || || || |||||||| || || || Sbjct 526654 ACGATGCAGATCTTCGTGAAGACCTTGACCGGGAAGACCATCACGCTCGACGTCGACTCC 526713 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 |||||| | || ||||| || |||||||| ||||| || || || || || || Sbjct 526714 GGCGACACGATCGAGACGGTCAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCGGAC 526773 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || ||| |||||||||| || || ||||| |||||| | | | | || || Sbjct 526774 CAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACACTCGCCGACTAC 526833 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||||||||| || ||| | || |||| Sbjct 526834 AACATTCAGAAGGAATCGACGCTTCACCTCGTTCTGCG 526871 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||||||||||| | || || || || || || || || ||||| || || || | Sbjct 526885 ACGATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATCACGCTGGACGTCGACTCT 526944 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||| | || || || || || ||||| ||||| || || || || || || Sbjct 526945 GGTGACACCATCGAGACTGTCAAGGCGAAAATCCAGGACAAGGAGGGTATCCCGCCGGAC 527004 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || | ||||||||||| |||||||| |||||| | | | | | || || Sbjct 527005 CAGCAGCGACTCATCTTTGCCGGCAAACAGCTCGAGGATGGGCGCACGCTTGCCGACTAC 527064 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || |||||||| || ||| | || ||||| | || || || Sbjct 527065 AACATCCAGAAAGAATCGACGCTTCACCTCGTCCTGCGACTTCGTGGCGG 527114 Score = 95.1 bits (104), Expect = 1e-14 Identities = 165/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||||||||||| | || ||||| || || || || || || || || || || | Sbjct 527347 ACGATGCAGATCTTCGTGAAGACGCTCACTGGGAAGACCATCACTCTGGATGTCGATTCT 527406 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||| | || || || || ||||| || ||||| ||||| || || || || Sbjct 527407 GGTGACACCATCGAGACTGTCAAGGCGAAGATTCAGGACAAGGAAGGCATCCCGCCAGAC 527466 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || ||| |||||||||| ||||| ||||||||||| | | | | | || || Sbjct 527467 CAGCAGCGTCTGATCTTTGCGGGGAAGCAGCTGGAGGACGGGCGCACGCTCGCGGACTAC 527526 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGA 24939 ||||| || ||||| || || || ||| | || | || | || || ||| |||||| Sbjct 527527 AACATCCAGAAGGAGTCCACCCTCCACCTTGTTCTTCGTCTTCGTGGTGGC--AACTGA 527583 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 24702 CGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA 24761 ||||||| || || | || ||||| ||||| || || || || ||||| || | | Sbjct 945014 CGATGCAAATATTCGTCAAGACGCTTACCGGCAAGACGATCACACTCGATGTGGCGTCGT 945073 Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 | ||||| | || | || || |||||||| ||||| || || || || || || | Sbjct 945074 CGGACACGATCGAGGCCGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGACC 945133 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 |||| ||| |||||||||| || || ||||||||||| | | || | || || | Sbjct 945134 AACAGCGTCTGATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGCACGCTGGCCGACTACA 945193 Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907 |||| || ||||| ||||| || ||| Sbjct 945194 ACATCCAGAAGGAGTCGACGCTGCAC 945219 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || || ||||||||||| || || | Sbjct 526423 ACCATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATTACGCTCGACGTCGACAGC 526482 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||| | || || || || |||||||| ||||| || || || || ||||| Sbjct 526483 GGTGACACGATCGAGACCGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCGCCCGAC 526542 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || ||||||| ||||| || ||||| ||||| | | | | | || || Sbjct 526543 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGGCGGACGCTAGCCGACTAC 526602 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || || ||||| ||||| || ||| | || |||| Sbjct 526603 AATATCCAGAAGGAGTCGACGCTGCACCTTGTTCTGCG 526640 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 ||| ||||||||||| | || || || || || || || || ||||| || || || | Sbjct 527115 TACCATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACGATCACGCTGGACGTCGACTC 527174 Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 || || | || || || || || ||||| ||||| || || || || ||||| Sbjct 527175 TGGTGATACGATCGAGACTGTCAAGGCGAAAATCCAGGACAAGGAGGGCATCCCGCCCGA 527234 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 ||||| ||| ||||||| || || || ||||| |||||| | | | | || || Sbjct 527235 CCAACAGCGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGACGCACGCTTGCCGACTA 527294 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||| || || || ||||| || ||| ||||| |||| Sbjct 527295 CAACATCCAGAAAGAGTCGACTCTGCACCTGGTGCTGCG 527333 >seq634 Length=872753 Score = 111 bits (122), Expect = 1e-19 Identities = 172/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 |||||||||||||| | || || || || ||||| || || |||||||| || || | Sbjct 526884 ACGATGCAGATCTTCGTGAAGACCCTGACGGGTAAGACGATCACGCTCGATGTCGACTCG 526825 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 |||||| | || || || || |||||||| ||||| || || || ||||| || Sbjct 526824 GGCGACACGATCGAGACCGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGAC 526765 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 ||||| ||| ||||||| || || || ||||| |||||| | | | | | || || Sbjct 526764 CAACAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGGCGCACGCTCGCCGACTAC 526705 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAG 24940 ||||| || ||||| ||||| | ||| | || | || |||| || || | | ||| Sbjct 526704 AACATCCAGAAGGAGTCGACGTTGCACCTCGTCCTCCGTCTGCGTGGTGGTGCCATCGAG 526645 Query 24941 CCAACG 24946 ||| || Sbjct 526644 CCATCG 526639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449893848978760