Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodiophora_20brassicae_20[genbank_20GCA_5F002093825.1_202017-04- 14] 667 sequences; 24,831,078 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq67 489 2e-133 seq334 125 7e-24 seq634 116 4e-21 seq179 116 4e-21 seq45 96.9 3e-15 >seq67 Length=308067 Score = 489 bits (542), Expect = 2e-133 Identities = 1275/1931 (66%), Gaps = 110/1931 (6%) Strand=Plus/Minus Query 147942 GCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCG 148001 ||||| ||| ||||| ||||||||||||||||||||||| | ||| |||||| Sbjct 209257 GCGGGCCGAGATCGCAGGTAGTACATGCCCGTCTTGAGGCCTTTAGTCCAGGCGTAGAAA 209198 Query 148002 TGCACCGACGACA---TG--AGCGTGTACGTCGGG--TGCGGCACAAACAGATTAAACGA 148054 |||| ||||| || || | || | ||||| || || | || ||||| Sbjct 209197 TGCATCGACGTCAGCTTGCCAAAGTTAATGTCGGTCATGTGG-------ACGTTGAACGA 209145 Query 148055 CTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTT 148114 || |||||||||||| ||||| || || |||||||| ||||| || ||| ||| Sbjct 209144 TTGCGACTGGTCAATGAAGGCGCCGCGATCGGCGGCCATGTCAATCAGCGACTTCTGCTT 209085 Query 148115 CATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTG 148174 |||||||| | ||||||||||| ||||| || | || || | ||| ||| ||| Sbjct 209084 GATCTCCCAAACGGTCTTGTACAGGTCCTTGAGATCCTGCGGGATTCGGTCAATGTTCTG 209025 Query 148175 CACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTC 148234 ||||| ||| ||| || | | ||| | ||||| ||||| | ||| | | Sbjct 209024 GACCGACCCGTTGTGTGCCATCAGCTGGTGGCGCAAGTCGTCGTCCCACAGGCCCCGGTT 208965 Query 148235 GATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCG 148294 ||||||||| | | ||| | || || | || ||||| || || ||||| || | Sbjct 208964 GATCAGGTCCACCAGCAGGTGCTTGTTGATGACGGTGAACTCACCAGCCAGCACACGTCT 208905 Query 148295 CAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGT 148354 | || | ||||||||| |||| || || |||||||||| |||| ||||| ||| Sbjct 208904 CGCGTAGATGTTGCTCGTGTACGGCTCGAAGCACTCGTTGTTCCCCAGGATCTGGCTGGT 208845 Query 148355 CGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTT 148414 | || |||||||| ||| | ||||| ||| || |||| || | || | Sbjct 208844 TGACGCTGTGGGCATCGGCGCGAGCAGCAACGAATTCCGCATGCCATGCCGGGCGATATC 208785 Query 148415 GCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTG 148474 | |||||| || |||||||||| ||| |||||| | || |||||||||||| |||| Sbjct 208784 GGCCTTCAGCGCGTCCCAGTCCCATCGCGACGACGGCTTTACATTCCACATGTCGAACTG 208725 Query 148475 CAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGC 148534 |||||||| || || |||||||| | |||| ||| || |||| | | || Sbjct 208724 GAGAATGCCCTGGGACGCCGGGCTGCCAGGGAACGACTCGTAGGGGCCGTCCTTAACGGC 208665 Query 148535 CAGTTCGCAGCTCGCCTCGAGCGCGCCGTA--GTAAATCGTCTCGGCAATTTGCCTGTTG 148592 ||| || | || | || |||| | ||| ||||||||| || | | ||| Sbjct 208664 CAGATCCTTGGAGGCA--GTGCAGGCCGCAAAGTAGATCGTCTCGAAGATGTCGCGGTTC 208607 Query 148593 AGCA---GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCA 148649 || ||||| ||| | | ||| |||| |||| | | | || ||||| ||| Sbjct 208606 AGTGCGCGCGCCTCCGGCGAG---TCGAACGGGTACCGCATCTGGATGAAGGCGTCCGCA 208550 Query 148650 AGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG 148709 |||||||| ||||| | || | ||||| |||| ||||| || ||||||| ||| Sbjct 208549 AGGCCCTGGACGCCGATTCCGACGGGCCTGTGTCGCATGTTCGATCGGCGCGCT---TCG 208493 Query 148710 AGC---GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTA 148766 || || || | ||||| |||||| | ||||| || || || || | || Sbjct 208492 GGCACAGGGTAATAGTTGCCGTCGATCACCTTGTTCAGGTTCAGCGTTACAGTGTACGTC 208433 Query 148767 ATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATA 148826 | | |||| | || ||| || || | || || | | | || ||||| Sbjct 208432 ACGTCGTACAGCTTATGGAAGTCGAACGTGGCGTCAGTGACGAACTTGGACAGTGCGATC 208373 Query 148827 GAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCAC 148886 || || || ||||| ||||||||||| |||| | ||||||| ||||| || | |||| Sbjct 208372 GACGCCAGGTTGCAGACGGCCGTCTCGTCCGCCGACGTGTACTCGACGATTTCCGTGCAC 208313 Query 148887 AGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCC 148946 || || |||| |||||| |||| |||||| || || |||||||||||| |||||| Sbjct 208312 AGGTTACTGCTCTTGATCGTCCCCAGGTTCTTCTGGTTCGACTTGCTGTTGCAAGCGTCC 208253 Query 148947 TTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGC 149003 ||||||| |||||| || || ||||| ||||| | |||| || ||||| | Sbjct 208252 TTGTACATCATGTAGGGCGTCCCCGTTTCGACCTGGGCCTCCAGGATCGCGAACCA---C 208196 Query 149004 AGGTCCTGCGCGCGCACTTGCTGCTCGTAGC-GACCCTCCTGCTCGTATAAAGTAT--AC 149060 ||||||||||| | | || ||| || | ||||| | ||| ||| || || Sbjct 208195 AGGTCCTGCGCCCTGATCGTCTTA-CGTTGCCGGCCCTCGTTCTC--ATAGCGTTCGAAC 208139 Query 149061 AGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATG 149120 ||| ||||| | ||||| || || | |||||||| || || |||||| | Sbjct 208138 AGCGCAGCGAACTCGTCGCCCCAGACGTCCGCCAGACCGGGCGCCTCGTTCGGGCAGAAC 208079 Query 149121 AGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCG 149180 | |||||| | |||| || | ||| |||| ||| ||||||||||| | ||| || || Sbjct 208078 AACGACCAGTGGGCGTCGGCCTGCACACGCTGCATGAACAGATCGGGAATCCAAAGGCCG 208019 Query 149181 TACATGAGGTCGCGCGC------------CTTGCAGTC-TTCGGCGCC------------ 149215 || | ||||| || || ||||| || ||| || || Sbjct 208018 TAAAACAGGTCACGAGCACGTTCCTCTTCCTTGCCGTGGTTCTGCACCGAAAGCTCAGAG 207959 Query 149216 -CAT--GTTGCGGCGCAG--GTTGAGCAC---------------GCT----------GAA 149245 ||| |||| | |||| ||| | | | ||| ||| Sbjct 207958 ACATACGTTGGGAGGCAGCTGTTCAACCCAGGGTACCTTTTTCAGCTCCAGGAACTCGAA 207899 Query 149246 TATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTT---GCCGCC 149302 ||||||||||||||||| || | |||||| |||| |||||||||||| || |||||| Sbjct 207898 GATGTCCGCGTGCCACGGTTCCAGGTACACGGCGAACGCGCCCTTGCGTTTCCCGCCGCC 207839 Query 149303 CTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGC 149362 ||||||||||| ||| | ||| | ||||| |||| ||| || | ||||| | | Sbjct 207838 CTGGTCGACGTAGCGGGCAGTGTCGGAGAACACGCGAAGCATGGGGACGATGCCGTTCGA 207779 Query 149363 AGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCC 149422 |||||||| ||| | |||| |||| || ||||| |||||||||| |||||| Sbjct 207778 CGTGCCGTTCGTACCACGAATGTAGGAGCCGGTGGCGCGCACGTTGTGCACGTGGACGCC 207719 Query 149423 GATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTC 149482 ||||||||| | |||| |||||| ||||| |||| ||||| |||||||||||| Sbjct 207718 AATGCCGCCGGCCGACTTGGAGATGATGGCGCATTCGCGCAGCGTGTCGTAGATGCCCTC 207659 Query 149483 GATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCC 149542 |||| |||| ||| | | || ||| ||||| || |||||||||| | ||||||| Sbjct 207658 GATGGAGTCGTTCTTGAGCGCCACCAGGAAGCAGGACGACATTTGCGGGACGGGCGTGCC 207599 Query 149543 GGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGA 149602 ||| ||||||||| ||| ||||| || || | |||| | ||| | | ||||| Sbjct 207598 GGCGTTGAACATGGTCGGGGACGCGTGCGTGAACCACTTCTCGGACATGAGGTTGTACGT 207539 Query 149603 CTCGA-GCACGCGGTCCATGTCATCGCC--ATGGATGCCTATGGCGACGCGCATCAGCAT 149659 | || | ||| | | || || || | |||||||| | |||||||||||||||||| Sbjct 207538 TTGGATGGCCGCCG-CGATATC--CGACTTGTGGATGCCGACGGCGACGCGCATCAGCAT 207482 Query 149660 ATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTA--GCCGTTTTCTAGT 149717 ||||| || ||||| || | ||| | | || |||| ||| ||| ||| || Sbjct 207481 GTGCTGTGGGCGCTCGGCGATCTTGCCGTCGACCTTCAGCAGGTACGACCG--TTCCAGG 207424 Query 149718 GTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGATC 149777 |||||| |||| || || | |||| || ||||| ||| | |||| | ||||| Sbjct 207423 GTCTTGAAGCCGAAATAGTCAAAGTCGAAATCGCGATCGTAGATGATGGACGAGTCGAGG 207364 Query 149778 AGCGCGCGGTT 149788 || ||| ||| Sbjct 207363 AGTTCGCCGTT 207353 >seq334 Length=1041161 Score = 125 bits (138), Expect = 7e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| |||||||| ||| | | ||| | |||||| ||||||||||| Sbjct 526622 GTCGACTCCTTCTGGATATTGTAGTCGGCTAGCGTCCGCCCGTCCTCAAGCTGCTTGCCG 526563 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || |||||||||||||| || || || |||||||| |||||| ||| Sbjct 526562 GCGAAGATCAGGCGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTGGATCTTGGCCTTC 526503 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | ||| | |||||| | || ||||||| || | ||| ||||| ||||| || Sbjct 526502 ACGGTCTCGATCGTGTCACCGCTGTCGACGTCGAGCGTAATGGTCTTGCCCGTCAGGGTC 526443 Query 133644 TTTACGAAAATCTGCATGG 133662 || ||||| |||||||||| Sbjct 526442 TTCACGAAGATCTGCATGG 526424 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| | | ||| | | | ||||| ||||||||||| Sbjct 526853 GTCGATTCCTTCTGAATGTTGTAGTCGGCGAGTGTGCGGCCA-TCCTCAAGCTGCTTGCC 526795 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || ||||| || |||||||| |||||| ||| Sbjct 526794 AGCAAAGATCAGACGCTGCTGGTCCGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCTT 526735 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | ||||||| || || ||||||| |||| ||| || ||||||| || Sbjct 526734 GACCGTCTCGATCGTGTCGCCGGAGTCGACGTCGAGCGTGATGGTCTTCCCGGTCAAGGT 526675 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 526674 CTTCACGAAGATCTGCAT 526657 Score = 120 bits (132), Expect = 3e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || ||||| ||| | | |||| | | | |||||||||||||| || Sbjct 527315 GTCGACTCTTTCTGGATGTTGTAGTCGGCAAGCGTGCGTCCA-TCCTCGAGCTGCTTTCC 527257 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||| |||||||| |||||||| |||||||| ||| || ||| Sbjct 527256 AGCGAAGATCAGACGCTGTTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATTTTCGCCTT 527197 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || ||| | ||| || | || ||||| | |||| || ||||| ||||| || Sbjct 527196 GACAGTCTCGATCGTATCACCAGAGTCGACGTCCAGCGTGATCGTCTTGCCCGTCAGGGT 527137 Query 133643 TTTTACGAAAATCTGCATGG 133662 || ||||| |||||||||| Sbjct 527136 CTTCACGAAGATCTGCATGG 527117 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| || | | |||| | |||||| |||||||| || Sbjct 527547 GGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGCCCGTCCTCCAGCTGCTTCCC 527488 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || ||||||||||||||||| ||||| ||| Sbjct 527487 CGCAAAGATCAGACGCTGCTGGTCTGGCGGGATGCCTTCCTTGTCCTGAATCTTCGCCTT 527428 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || ||| | ||||| | || || || | |||| ||| || || || || || Sbjct 527427 GACAGTCTCGATGGTGTCACCAGAATCGACATCCAGAGTGATGGTCTTCCCAGTGAGCGT 527368 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 527367 CTTCACGAAGATCTGCAT 527350 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || |||||||| || ||||| ||| | | |||| | ||||||||||| ||||| Sbjct 527084 GTCGATTCTTTCTGGATGTTGTAGTCGGCAAGCGTGCGCCCATCCTCGAGCTGTTTGCCG 527025 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||| ||||||||||| || ||||| || |||||||| ||| || |||| Sbjct 527024 GCAAAGATGAGTCGCTGCTGGTCCGGCGGGATACCCTCCTTGTCCTGGATTTTCGCCTTG 526965 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | ||| | ||||| | || ||||| | |||| || ||||| ||||| || Sbjct 526964 ACAGTCTCGATGGTGTCACCAGAGTCGACGTCCAGCGTGATCGTCTTGCCCGTCAGGGTC 526905 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 526904 TTGACGAAGATCTGCAT 526888 >seq634 Length=872753 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| ||| | | |||| | ||||||||||||||||| Sbjct 526685 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGCCCATCCTCGAGCTGCTTGCCA 526744 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || ||||| ||||| ||||| || || |||||||| |||||| |||| Sbjct 526745 GCGAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTG 526804 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | ||| | ||||||| | || || |||| |||| || || || ||||| || Sbjct 526805 ACGGTCTCGATCGTGTCGCCCGAGTCGACATCGAGCGTGATCGTCTTACCCGTCAGGGTC 526864 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 526865 TTCACGAAGATCTGCAT 526881 >seq179 Length=351413 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | | ||| ||| | ||||| ||||||||||| Sbjct 22482 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCA-TCCTCCAGCTGCTTGCC 22540 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| ||||| || |||||| ||| Sbjct 22541 GGCGAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTATCCTGGATCTTGGCCTT 22600 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||| | ||| ||| | |||||||| | || | || ||||| ||||| || Sbjct 22601 CACCGTCTCGATCGTATCGCCGCTGTCCACGTCCAGTGTAATCGTCTTGCCCGTCAGCGT 22660 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 22661 CTTGACGAAGATCTGCAT 22678 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || ||| |||| | |||||| ||||||||||| Sbjct 23637 GTCGACTCCTTCTGAATGTTGTAGTCCGCCAGCGTGCGCCCGTCCTCCAGCTGCTTGCCG 23696 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || || ||||||||||| || |||||||| ||||| || |||||| ||| Sbjct 23697 GCAAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 23756 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | ||||||| | ||||| || | || | || ||||| ||||| || Sbjct 23757 ACCGTCTCGATCGTGTCGCCGCTGTCCACATCCAGCGTAATCGTCTTGCCCGTCAGGGTC 23816 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 23817 TTCACGAAGATCTGCAT 23833 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | | ||| ||| | ||||| |||||||| || Sbjct 23406 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCA-TCCTCCAGCTGCTTTCC 23464 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || ||||| || || ||||||||||| |||||||| ||||| || Sbjct 23465 GGCAAAAATCAGACGCTGTTGATCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCTTT 23524 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | ||||||| | || || || | |||| ||| ||||| || || || Sbjct 23525 GACCGTCTCGATCGTGTCGCCTGAGTCGACATCCAATGTGATGGTCTTGCCCGTAAGCGT 23584 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 23585 CTTGACGAAGATCTGCAT 23602 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | | ||| ||| | ||||| ||||||||||| Sbjct 22713 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCA-TCCTCCAGCTGCTTGCC 22771 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||| ||||| || || || || |||||||| ||||| ||| Sbjct 22772 GGCGAAGATCAGACGCTGTTGGTCCGGGGGAATACCCTCCTTGTCCTGAATCTTGGCCTT 22831 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | || | |||||| | || ||||| | || | ||| || || ||||| || Sbjct 22832 CACAGTTTCGATCGTGTCACCCGAGTCGACGTCAAGCGTAATGGTCTTCCCTGTCAGCGT 22891 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 22892 CTTGACGAAGATCTGCAT 22909 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | | ||| | | | ||||| ||||||||||| Sbjct 23175 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCA-TCCTCCAGCTGCTTGCC 23233 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || || || || || ||||| ||||| ||| Sbjct 23234 GGCGAAGATCAGACGCTGCTGGTCCGGGGGAATACCCTCTTTGTCCTGAATCTTGGCCTT 23293 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | || ||||| | || | ||| || || ||||| || Sbjct 23294 CACCGTTTCGATTGTGTCACCCGAGTCGACGTCAAGCGTAATGGTCTTTCCTGTCAGCGT 23353 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 23354 CTTGACGAAGATCTGCAT 23371 >seq45 Length=544478 Score = 96.9 bits (106), Expect = 3e-15 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 116458 CTGCCGCGCGGCCTGCACGGCTTCCACGTGCACGAGTTTGGCGACACCA-GCAACGGCTG 116516 ||| ||| ||||| ||||||||||||||| || ||| |||||||| | |||| || || Sbjct 517867 CTGACGCCCGGCCAGCACGGCTTCCACGTCCATGAGCACGGCGACACGACGCAA-GGGTG 517809 Query 116517 CACCTCCGCCGGCGAACACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGC 116576 | | || |||||| |||| ||| || |||| || || ||||||||| || | | Sbjct 517808 CGCATCGACCGGCGGGCACTACAATCCGTTCGGCAAGACGCATGGCGCGCCCGCCGACAC 517749 Query 116577 CGTTCGTCACGTCGGTGACCTGGGCAACAT 116606 || || |||||||| ||||| |||||||| Sbjct 517748 CGAGCGGCACGTCGGCGACCTTGGCAACAT 517719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483416769479080