Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq148 176 5e-39 >seq148 Length=44851 Score = 176 bits (194), Expect = 5e-39 Identities = 387/577 (67%), Gaps = 5/577 (1%) Strand=Plus/Plus Query 145695 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCC 145754 ||||||| ||| ||||||||||| |||| || || | || || || || | ||||| Sbjct 22182 GTGGTTGTTGTACACGTGCGCGTCGCCCAACACATGCACAAACTCTCCCGGTTGAAGGCC 22241 Query 145755 CGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCC 145814 | || || |||||| ||||||||| | |||||||| |||||||| ||||| || Sbjct 22242 GACAATATGCGCCACCATGATGGTCAGCAGCGCATAGCTGGCAATGTTGAAAGGCACACC 22301 Query 145815 CAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGC---CAC 145871 || |||||||| | ||||||||||||| |||||| || ||||| |||| || ||| Sbjct 22302 CAAACCCATGTCGCAAGAGCGCTGGTACATCTGGCACGACAGCTCGCCGCTGGCATTCAC 22361 Query 145872 GTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTT 145931 ||| || ||| | | |||||| || |||| |||||| | || | ||||| || Sbjct 22362 GTAAAATTGGGCGAACATGTGGCACGGTGGCAAGGCCATTTGCGATAGCGCGGCCGGATT 22421 Query 145932 CCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTC 145991 ||| || | | ||| | | | | | ||||| | | | | |||| | Sbjct 22422 CCACGCACTCATGACCATGCGGCGGTCATTCGGGTTTGTGCGCAGCGTATCAATCA-CAC 22480 Query 145992 CCTG-AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCC 146050 |||| ||||| |||||||| ||||| ||| || | | || | ||| | || | Sbjct 22481 CCTGCAGCTGATCCACGCCTTGCCCGGCGTAGTCGGCGTGCTTGTTCGAGTATGTTGCGC 22540 Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCA 146110 | ||||| | |||||| || || ||||| || |||||||| || ||||| | | || Sbjct 22541 CAAAGTGGCGCCACTGAAAGCCATAGACCGGACCCAGGTCGCCCGGCTCACGCTCAGTCA 22600 Query 146111 GCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCG 146170 | ||| | | || || || || || ||||| ||||||| || | || || | | Sbjct 22601 GACCGAGACTATCCAGAAACTCGCGCGAGCCGTTCCCGTCCCAAATGTGGATACCGCGTG 22660 Query 146171 CGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCC 146230 | | ||| |||| ||||||| || | | ||||| |||| || || ||| | Sbjct 22661 CCGCGAGTAGGTTGGCGTCCGTGCTGCCGCGCACAAACCACAGCATTTCCTCCGCGACGC 22720 Query 146231 CCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 | | |||||| || | ||| ||||| ||||| ||||| Sbjct 22721 CGCGCCAGAACACGCGCTTTGTGGTGAGCAGCGGGAA 22757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590054568856560